Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_05811 Corchorus olitorius HOM05D000047 ORTHO05D000589 5.1e-22 106.7 48 100.0
COL.COLO4_24788 Corchorus olitorius HOM05D000047 ORTHO05D000589 3.2e-16 87.4 47 83.0
COL.COLO4_22341 Corchorus olitorius HOM05D000047 ORTHO05D000589 5.3e-11 70.1 46 65.2
COL.COLO4_25238 Corchorus olitorius HOM05D000047 ORTHO05D000589 6.9e-11 69.7 46 65.2
COL.COLO4_37417 Corchorus olitorius HOM05D000047 ORTHO05D000589 7.6e-10 66.2 46 63.0
Thecc.05G094500 Theobroma cacao HOM05D000047 ORTHO05D000589 3.8e-09 63.9 46 58.7
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 1.2e-07 58.9 46 54.3
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 1.2e-07 58.9 46 54.3
VMungo1127G1198 Vigna mungo HOM05D000066 ORTHO05D000589 1.2e-07 58.9 46 60.9
TPR.G22150 Trifolium pratense HOM05D000047 ORTHO05D000589 2.1e-07 58.2 46 52.2
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 2.7e-07 57.8 46 56.5
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 2.7e-07 57.8 46 56.5
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 3.5e-07 57.4 46 52.2
Duzib106G2061 Durio zibethinus HOM05D000047 ORTHO05D000044 4.6e-07 57.0 46 52.2
Duzib213G0125 Durio zibethinus HOM05D000047 ORTHO05D000044 4.6e-07 57.0 46 52.2
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 7.9e-07 56.2 40 57.5
Duzib177G0032 Durio zibethinus HOM05D000047 ORTHO05D000589 1.0e-06 55.8 46 52.2
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 1.0e-06 55.8 46 50.0
TPR.G5842 Trifolium pratense HOM05D000047 ORTHO05D000589 1.0e-06 55.8 46 50.0
TWI31G0960 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.3e-06 55.5 46 47.8
Ca_05281_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.8e-06 55.1 46 52.2
Ca_20345_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.3e-06 54.7 46 50.0
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.0e-06 54.3 46 50.0
TPR.G14980 Trifolium pratense HOM05D000047 ORTHO05D000589 3.0e-06 54.3 46 50.0
TPR.G17648 Trifolium pratense HOM05D000047 ORTHO05D000589 3.0e-06 54.3 46 52.2
TPR.G22702 Trifolium pratense HOM05D000047 ORTHO05D000589 3.9e-06 53.9 46 50.0
TPR.G10353 Trifolium pratense HOM05D000014 ORTHO05D000589 5.1e-06 53.5 46 47.8
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 5.1e-06 53.5 46 50.0
TWI09G0076 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 5.1e-06 53.5 46 45.7
TWI73G1077 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 5.1e-06 53.5 46 45.7
TWI81G0102 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 5.1e-06 53.5 46 45.7
TWI15G0372 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 6.7e-06 53.1 46 45.7
TWI15G0628 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 6.7e-06 53.1 46 45.7
TPR.G13572 Trifolium pratense HOM05D000047 ORTHO05D000589 8.7e-06 52.8 46 50.0
TWI15G0057 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 8.7e-06 52.8 46 45.7
TWI39G1040 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 8.7e-06 52.8 46 45.7


User provided reference genes

Program Settings