Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 4.5e-140 501.1 232 100.0
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.1e-122 443.4 220 90.9
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 4.2e-122 441.4 219 89.5
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.0e-104 383.6 216 81.0
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.8e-104 382.9 220 79.5
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 8.8e-104 380.6 206 82.0
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 1.5e-103 379.8 207 82.1
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 7.5e-103 377.5 209 80.9
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 4.8e-102 374.8 218 78.9
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 3.1e-101 372.1 217 78.3
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 5.9e-100 367.9 219 78.1
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 7.7e-100 367.5 211 77.7
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 5.0e-99 364.8 207 78.7
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.9e-98 362.8 208 79.8
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 1.2e-97 360.1 217 74.2
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.3e-96 355.9 207 75.8
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 4.0e-96 355.1 234 70.9
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 4.4e-95 351.7 219 73.1
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 5.7e-95 351.3 214 76.2
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 7.0e-93 344.4 207 72.9
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 9.2e-93 344.0 206 73.8
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 5.0e-91 338.2 224 68.3
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 4.7e-89 331.6 229 66.4
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.8e-88 329.7 206 73.3
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 2.6e-87 325.9 206 72.8
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.2e-86 322.8 225 66.2
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 3.7e-86 322.0 210 69.5
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 5.4e-85 318.2 222 65.3
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 9.2e-85 317.4 216 66.2
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 9.2e-85 317.4 221 63.8
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.6e-84 316.6 208 68.3
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 3.5e-84 315.5 232 65.9
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 7.8e-84 314.3 206 68.0
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 7.8e-84 314.3 205 69.3
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 3.3e-82 308.9 251 60.6
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 7.3e-82 307.8 200 69.0
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 2.8e-81 305.8 207 69.1
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 4.7e-81 305.1 177 76.8
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.2e-79 300.4 200 68.5
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 2.9e-78 295.8 210 62.9
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 1.2e-76 290.4 200 66.0
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.7e-75 286.6 210 59.5
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 5.0e-75 285.0 213 61.0
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 7.3e-74 281.2 212 63.2
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.2e-71 273.9 217 59.4
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 3.0e-67 259.2 205 60.5
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 2.5e-66 256.1 176 63.1
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 5.8e-63 245.0 141 81.6
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.3e-62 243.8 146 76.0
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 2.9e-62 242.7 122 82.8
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 2.1e-60 236.5 170 62.9
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 6.6e-59 231.5 124 85.5
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 2.0e-55 219.9 127 74.0
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.6e-55 219.5 204 50.5
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 2.2e-54 216.5 126 72.2
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.4e-53 213.0 124 70.2
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 7.1e-53 211.5 233 45.9
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.0e-51 207.6 259 40.9
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 1.3e-51 207.2 159 59.1
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 2.3e-51 206.5 206 51.5
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 2.1e-49 199.9 124 65.3
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 3.6e-49 199.1 103 79.6
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 8.1e-49 198.0 108 77.8
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.1e-48 197.6 111 73.9
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 2.6e-47 193.0 112 75.0
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.2e-44 184.1 222 43.2
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 1.1e-42 177.6 110 77.3
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 2.1e-41 173.3 98 72.4
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 1.4e-40 170.6 116 66.4
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 5.3e-40 168.7 192 41.1
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 2.6e-39 166.4 86 81.4
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 4.5e-39 165.6 120 60.8
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.3e-38 164.1 208 40.4
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.1e-36 156.8 98 67.3
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.3e-34 149.1 197 40.6
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 4.8e-33 145.6 106 53.8
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.2e-28 131.0 192 35.4
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 2.1e-28 130.2 199 39.2
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 3.5e-28 129.4 90 75.6
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 3.0e-27 126.3 188 35.1
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 4.3e-26 122.5 73 68.5
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 2.2e-25 120.2 205 33.2
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.3e-22 110.9 117 47.9
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.8e-19 100.5 127 44.9
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 4.3e-18 95.9 62 74.2
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 1.3e-14 84.3 213 30.5
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 6.5e-14 82.0 62 71.0
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 3.0e-11 73.2 46 78.3
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.3e-09 67.8 50 68.0
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.7e-09 66.2 56 67.9
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 8.2e-09 65.1 47 61.7
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 1.1e-08 64.7 50 66.0
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 9.1e-08 61.6 47 59.6
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 3.4e-07 59.7 47 63.8
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.4e-07 59.7 37 73.0
HPP92_022683 Vanilla planifolia HOM05D007543 ORTHO05D009555 4.5e-07 59.3 132 31.8
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.3e-06 57.8 48 60.4
AagrBONN_evm.TU.Sc2ySwM_117.1424 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.0e-06 55.8 57 45.6


User provided reference genes

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