Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 5.5e-145 517.7 275 100.0
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 2.2e-130 469.2 275 90.2
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 4.4e-126 454.9 273 87.2
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 1.3e-122 443.4 272 86.8
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 3.8e-122 441.8 272 86.4
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.2e-121 438.3 272 85.7
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 9.1e-116 420.6 269 79.2
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 2.5e-113 412.5 273 79.1
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.2e-112 410.2 272 78.7
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 2.7e-112 409.1 272 78.3
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.0e-111 407.1 270 79.6
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 2.3e-111 406.0 275 75.6
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.0e-111 405.6 273 76.2
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 4.0e-111 405.2 272 77.6
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.5e-110 403.3 263 77.9
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.0e-110 402.9 273 75.8
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 3.4e-110 402.1 272 77.6
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 5.7e-110 401.4 272 75.0
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 5.7e-110 401.4 273 75.8
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.2e-109 399.4 273 75.8
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 2.8e-109 399.1 269 77.3
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 4.9e-109 398.3 269 75.5
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.1e-108 397.1 272 74.3
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 1.1e-108 397.1 270 76.3
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 2.4e-108 396.0 269 75.8
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.1e-108 395.2 264 76.1
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 5.4e-108 394.8 272 75.7
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 7.0e-108 394.4 266 76.7
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 9.1e-108 394.0 270 75.2
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.6e-107 393.3 272 74.3
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.0e-107 392.9 278 75.2
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.3e-106 390.2 270 73.0
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.3e-106 390.2 264 74.6
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.7e-106 389.8 270 73.0
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 1.5e-105 386.7 277 72.9
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 1.9e-105 386.3 270 74.4
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 3.3e-105 385.6 272 72.1
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 1.6e-104 383.3 269 71.4
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 2.8e-104 382.5 268 73.9
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.4e-103 380.2 275 72.4
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 2.3e-103 379.4 272 71.3
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 2.6e-102 375.9 268 69.8
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 3.4e-102 375.6 268 70.1
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 4.4e-102 375.2 268 70.5
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 5.7e-102 374.8 268 70.5
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 7.5e-102 374.4 271 70.5
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 1.3e-101 373.6 278 70.9
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.3e-101 373.6 270 70.4
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 2.2e-101 372.9 268 69.4
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 2.9e-101 372.5 275 71.3
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 2.9e-101 372.5 272 71.7
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.7e-101 372.1 275 70.5
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 6.3e-101 371.3 271 70.5
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 6.3e-101 371.3 271 70.5
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.1e-100 370.5 268 70.1
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.8e-100 369.8 269 68.8
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 3.2e-100 369.0 269 70.3
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 4.1e-100 368.6 268 69.0
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 4.1e-100 368.6 269 70.3
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 4.1e-100 368.6 321 63.2
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 9.2e-100 367.5 264 72.0
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 9.2e-100 367.5 270 71.1
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.5e-99 365.5 273 71.4
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 4.6e-99 365.2 269 68.0
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 4.6e-99 365.2 269 68.0
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 5.9e-99 364.8 269 71.7
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 2.9e-98 362.5 265 70.9
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.9e-98 362.5 269 68.0
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 1.1e-97 360.5 266 72.2
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 4.3e-97 358.6 273 70.7
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 9.5e-97 357.5 271 70.1
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.6e-96 356.7 274 69.7
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.1e-96 356.3 265 69.8
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 2.1e-96 356.3 271 69.7
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 2.8e-96 355.9 272 71.0
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 6.1e-96 354.8 274 69.3
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.4e-95 353.6 268 67.9
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 1.4e-95 353.6 273 69.6
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 2.3e-95 352.8 273 69.6
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 5.2e-95 351.7 266 68.4
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.5e-94 350.1 265 67.9
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.0e-94 349.7 237 77.2
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.7e-93 346.7 240 74.6
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 4.9e-93 345.1 272 65.8
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 1.9e-92 343.2 267 66.7
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 6.6e-90 334.7 231 74.5
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.9e-89 333.2 222 77.5
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 2.5e-89 332.8 273 65.2
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 6.2e-88 328.2 265 64.5
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 6.2e-88 328.2 265 64.9
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.2e-86 323.9 289 61.2
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.1e-84 317.4 270 62.2
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 9.2e-84 314.3 263 62.0
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 1.2e-83 313.9 222 73.9
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 2.7e-83 312.8 237 68.8
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 2.3e-82 309.7 260 61.5
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 3.9e-82 308.9 389 46.5
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 5.6e-81 305.1 238 66.8
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.7e-77 293.5 262 61.8
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 3.7e-77 292.4 232 64.7
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-76 290.8 264 59.5
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.2e-70 270.8 231 62.8
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.9e-69 266.2 271 56.5
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 5.3e-63 245.4 260 53.1
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 8.1e-56 221.5 149 77.2
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.3e-53 214.2 184 67.4
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 2.7e-51 206.5 220 56.4
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.9e-51 204.9 138 73.2
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 2.8e-48 196.4 179 62.0
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 2.2e-45 186.8 153 61.4
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 7.1e-44 181.8 217 50.7
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.1e-41 174.5 120 75.8
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 1.3e-40 171.0 136 58.1
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 2.1e-40 170.2 132 69.7
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 9.7e-33 144.8 137 62.0
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 4.1e-31 139.4 208 44.7
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 1.2e-30 137.9 119 63.0
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 7.9e-27 125.2 128 60.9
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 5.3e-23 112.5 77 75.3
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 4.5e-22 109.4 248 31.9
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.3e-21 107.8 79 70.9
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 2.5e-12 77.0 108 43.5
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 6.7e-10 68.9 50 66.0


User provided reference genes

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