Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_05467 Corchorus olitorius HOM05D003845 ORTHO05D004161 3.3e-184 648.3 339 100.0
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 8.9e-105 384.4 606 44.6
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 8.9e-105 384.4 606 44.4
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 2.0e-104 383.3 606 44.4
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 9.9e-104 380.9 606 44.1
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 4.9e-103 378.6 606 43.9
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 3.0e-84 316.2 606 38.1
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 8.1e-82 308.1 606 37.8
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 9.0e-81 304.7 606 36.3
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 9.9e-80 301.2 605 36.9
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 1.3e-79 300.8 604 37.1
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 1.7e-79 300.4 604 36.4
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.1e-78 297.7 605 36.5
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 2.7e-77 293.1 606 36.0
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 2.3e-76 290.0 602 36.7
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 4.3e-75 285.8 606 36.0
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 2.1e-74 283.5 605 35.5
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 4.8e-74 282.3 604 34.8
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 6.2e-74 282.0 603 36.2
Ca_04077_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 1.8e-73 280.4 545 37.6
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 4.0e-73 279.3 605 35.4
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 1.2e-72 277.7 605 34.9
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 1.5e-72 277.3 651 35.0
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 7.6e-72 275.0 605 34.9
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 9.3e-70 268.1 605 35.2
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 1.0e-68 264.6 591 34.7
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 1.3e-68 264.2 605 34.4
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 3.0e-68 263.1 313 52.4
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 3.0e-68 263.1 606 34.5
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 3.9e-68 262.7 602 34.2
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 1.5e-67 260.8 580 33.6
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.5e-67 260.8 604 34.3
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 1.5e-67 260.8 600 34.0
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 1.5e-67 260.8 318 51.3
Ciclev10010942m.g Citrus clementina HOM05D003845 ORTHO05D004161 5.7e-67 258.8 490 37.6
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 3.7e-66 256.1 603 34.2
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 4.8e-66 255.8 600 33.5
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 6.3e-66 255.4 317 51.1
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 6.3e-66 255.4 317 51.1
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 8.2e-66 255.0 591 33.5
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 8.2e-66 255.0 591 33.5
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 1.1e-65 254.6 591 33.2
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 1.8e-65 253.8 591 33.0
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 1.8e-65 253.8 604 33.6
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 2.4e-65 253.4 602 33.9
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 3.1e-65 253.1 317 49.8
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 4.1e-65 252.7 602 33.2
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 6.9e-65 251.9 619 33.3
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 9.0e-65 251.5 590 33.2
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 9.0e-65 251.5 601 34.1
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 1.2e-64 251.1 590 33.4
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 1.2e-64 251.1 600 35.3
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 2.0e-64 250.4 591 32.8
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 3.4e-64 249.6 602 32.4
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 3.4e-64 249.6 602 34.1
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 7.7e-64 248.4 600 33.3
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 2.9e-63 246.5 649 33.0
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 3.8e-63 246.1 600 34.0
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 5.0e-63 245.7 503 36.6
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 6.5e-63 245.4 591 31.8
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 8.5e-63 245.0 314 48.4
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 8.5e-63 245.0 600 33.5
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 8.5e-63 245.0 600 33.5
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 1.6e-61 240.7 590 32.0
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 6.1e-61 238.8 316 50.0
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.0e-60 238.0 357 45.4
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 1.4e-60 237.7 316 48.7
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 3.0e-60 236.5 316 48.1
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 5.1e-60 235.7 318 48.4
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 1.5e-59 234.2 318 48.7
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 3.3e-59 233.0 624 33.8
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 7.4e-59 231.9 349 45.8
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 1.3e-58 231.1 311 47.3
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 4.8e-58 229.2 313 47.6
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.8e-57 227.3 202 61.9
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 2.0e-56 223.8 314 45.9
Lj1g0022983 Lotus japonicus HOM05D003845 ORTHO05D004161 7.7e-56 221.9 466 34.1
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 1.4e-54 217.6 528 32.4
BcaB03g15908 Brassica carinata HOM05D003845 ORTHO05D004161 4.2e-54 216.1 425 35.3
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 2.7e-53 213.4 317 46.1
unitig_899.g14511 Utricularia gibba HOM05D003845 ORTHO05D004161 1.8e-52 210.7 315 45.4
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 1.7e-50 204.1 227 53.3
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 1.7e-50 204.1 260 48.8
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 5.9e-48 195.7 354 41.2
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 1.3e-47 194.5 349 39.8
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 2.9e-47 193.4 317 41.6
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 2.9e-47 193.4 307 45.6
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 5.0e-47 192.6 317 42.9
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 3.6e-45 186.4 334 41.9
Hund16135 Selenicereus undatus HOM05D003845 ORTHO05D004161 1.1e-38 164.9 406 32.0
CSS0040864 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 2.0e-35 154.1 105 73.3
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 5.7e-35 152.5 361 33.8
Cpa.g.sc179.6 Carica papaya HOM05D003845 ORTHO05D004161 3.7e-34 149.8 148 54.1
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 4.1e-33 146.4 321 34.6
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 2.0e-32 144.1 323 34.1
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 2.2e-26 124.0 230 36.5
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 6.1e-21 105.9 326 30.4
DCAR_017205 Daucus carota HOM05D003845 ORTHO05D004161 8.3e-18 95.5 89 57.3
PRCOL_00002157 Prasinoderma coloniale HOM05D003845 ORTHO05D004161 1.9e-14 84.3 110 39.1
Cpa.g.sc179.5 Carica papaya HOM05D003845 ORTHO05D004161 7.3e-14 82.4 159 34.0
MCO14G535 Micromonas commoda HOM05D003845 ORTHO05D004161 1.8e-12 77.8 110 37.3
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 9.8e-11 72.0 138 36.2
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.2e-08 65.1 59 66.1
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 6.0e-08 62.8 60 65.0
Hund29189 Selenicereus undatus HOM05D008000 ORTHO05D000006 1.9e-06 57.8 78 51.3
Hund29191 Selenicereus undatus HOM05D008000 ORTHO05D000006 1.9e-06 57.8 78 51.3
Cfa024622 Carpinus fangiana HOM05D003845 ORTHO05D004161 3.3e-06 57.0 86 37.2


User provided reference genes

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