Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_04871 Corchorus olitorius HOM05D007963 ORTHO05D009967 2.4e-75 285.4 143 100.0
Duzib133G0999 Durio zibethinus HOM05D007963 ORTHO05D009967 3.7e-28 128.6 129 62.0
Thecc.01G408600 Theobroma cacao HOM05D007963 ORTHO05D009967 2.0e-26 122.9 145 55.9
Atru.chr11.2601 Acer truncatum HOM05D007963 ORTHO05D009967 8.0e-23 110.9 127 51.2
MSTRG.20574 Avicennia marina HOM05D007963 ORTHO05D009967 5.8e-21 104.8 116 48.3
SalBow5G1437 Salvia bowleyana HOM05D007963 ORTHO05D009967 1.7e-20 103.2 88 58.0
SalBow5G4167 Salvia bowleyana HOM05D007963 ORTHO05D009967 1.7e-20 103.2 88 58.0
TAR369G0233 Trochodendron aralioides HOM05D007963 ORTHO05D009967 2.2e-20 102.8 138 47.1
PGSC0003DMG400023738 Solanum tuberosum HOM05D007963 ORTHO05D009967 2.9e-20 102.4 119 49.6
Ciclev10033085m.g Citrus clementina HOM05D007963 ORTHO05D009967 8.3e-20 100.9 126 50.0
Sopen10g031160 Solanum pennellii HOM05D007963 ORTHO05D009967 8.3e-20 100.9 87 57.5
vmacro13678 Vaccinium macrocarpon HOM05D007963 ORTHO05D009967 8.3e-20 100.9 116 50.9
Potri.009G059100 Populus trichocarpa HOM05D007963 ORTHO05D009967 2.4e-19 99.4 133 46.6
CSS0005909 Camellia sinensis var. sinensis HOM05D007963 ORTHO05D009967 3.2e-19 99.0 121 49.6
MD02G1308200 Malus domestica HOM05D007963 ORTHO05D009967 9.2e-19 97.4 100 54.0
FvH4_5g32100 Fragaria vesca HOM05D007963 ORTHO05D009967 1.6e-18 96.7 119 49.6
Nn2g15279 Nelumbo nucifera HOM05D007963 ORTHO05D009967 1.6e-18 96.7 88 58.0
Prupe.2G017200 Prunus persica HOM05D007963 ORTHO05D009967 2.1e-18 96.3 108 52.8
Eucgr.J01210 Eucalyptus grandis HOM05D007963 ORTHO05D009967 4.6e-18 95.1 137 43.1
Sed0005364 Sechium edule HOM05D007963 ORTHO05D009967 4.6e-18 95.1 104 53.8
RcHm_v2.0_Chr7g0228141 Rosa chinensis HOM05D007963 ORTHO05D009967 1.0e-17 94.0 119 47.9
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 1.7e-17 93.2 130 44.6
CiPaw.14G001400 Carya illinoinensis HOM05D007963 ORTHO05D009967 1.7e-17 93.2 135 46.7
Cfa010795 Carpinus fangiana HOM05D007963 ORTHO05D009967 2.3e-17 92.8 97 54.6
Manes.07G007300 Manihot esculenta HOM05D007963 ORTHO05D009967 2.3e-17 92.8 113 51.3
CiPaw.13G006800 Carya illinoinensis HOM05D007963 ORTHO05D009967 3.0e-17 92.4 95 53.7
VMungo1127G0040 Vigna mungo HOM05D007963 ORTHO05D009967 6.6e-17 91.3 128 42.2
Migut.B01286 Erythranthe guttata HOM05D007963 ORTHO05D009967 8.6e-17 90.9 93 58.1
HanXRQChr01g0016481 Helianthus annuus HOM05D007963 ORTHO05D009967 1.9e-16 89.7 93 54.8
TWI09G0461 Tripterygium wilfordii HOM05D007963 ORTHO05D009967 2.5e-16 89.4 96 52.1
Glyma.12G008400 Glycine max HOM05D007963 ORTHO05D009967 3.3e-16 89.0 119 42.9
Gohir.A08G143400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 3.3e-16 89.0 67 71.6
Sabra09G0043500 Salix brachista HOM05D007963 ORTHO05D009967 4.3e-16 88.6 123 45.5
Lsat_1_v5_gn_1_105740 Lactuca sativa HOM05D007963 ORTHO05D009967 5.6e-16 88.2 95 52.6
AUR62009397 Chenopodium quinoa HOM05D007963 ORTHO05D009967 7.3e-16 87.8 89 53.9
Haze_03176 Corylus avellana HOM05D007963 ORTHO05D009967 7.3e-16 87.8 113 49.6
Sc23g0005920 Simmondsia chinensis HOM05D007963 ORTHO05D009967 7.3e-16 87.8 146 43.8
Gorai.004G171400 Gossypium raimondii HOM05D007963 ORTHO05D009967 9.5e-16 87.4 67 70.1
Gohir.D08G164400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 1.2e-15 87.0 61 72.1
MBI04_g34432_MAGBIO Magnolia biondii HOM05D007963 ORTHO05D009967 1.6e-15 86.7 99 50.5
MELO3C023985.2 Cucumis melo HOM05D007963 ORTHO05D009967 2.8e-15 85.9 96 49.0
DCAR_003219 Daucus carota HOM05D007963 ORTHO05D009967 2.8e-15 85.9 110 45.5
Hma1.2p1_2160F.1_g315600 Hydrangea macrophylla HOM05D007963 ORTHO05D009967 2.8e-15 85.9 76 57.9
Rhsim07G0056600 Rhododendron simsii HOM05D007963 ORTHO05D009967 2.8e-15 85.9 117 47.0
ClCG10G012280 Citrullus lanatus HOM05D007963 ORTHO05D009967 4.7e-15 85.1 98 48.0
QL04p008099 Quercus lobata HOM05D007963 ORTHO05D009967 6.2e-15 84.7 138 41.3
QL04p008549 Quercus lobata HOM05D007963 ORTHO05D009967 6.2e-15 84.7 138 41.3
CsaV3_3G032070 Cucumis sativus L. HOM05D007963 ORTHO05D009967 2.3e-14 82.8 96 46.9
Lj3g0025556 Lotus japonicus HOM05D007963 ORTHO05D009967 3.1e-14 82.4 117 46.2
SGA_v2.0_scaffold4G02518 Striga asiatica HOM05D007963 ORTHO05D009967 5.2e-14 81.6 90 50.0
Lalb_Chr20g0107921 Lupinus albus HOM05D007963 ORTHO05D009967 8.9e-14 80.9 83 54.2
unitig_61.g26362 Utricularia gibba HOM05D007963 ORTHO05D009967 8.9e-14 80.9 93 48.4
Cpa.g.sc125.16 Carica papaya HOM05D007963 ORTHO05D009967 1.2e-13 80.5 129 45.7
Sed0018324 Sechium edule HOM05D007963 ORTHO05D009967 2.6e-13 79.3 101 46.5
BcaNung06964 Brassica carinata HOM05D007963 ORTHO05D009967 1.3e-12 77.0 96 46.9
Thhalv10010836m.g Eutrema salsugineum HOM05D007963 ORTHO05D009967 1.3e-12 77.0 96 47.9
BcaB01g00449 Brassica carinata HOM05D007963 ORTHO05D009967 2.2e-12 76.3 96 45.8
A09p45130 Brassica napus HOM05D007963 ORTHO05D009967 2.2e-12 76.3 96 45.8
C08p27320 Brassica napus HOM05D007963 ORTHO05D009967 2.2e-12 76.3 96 45.8
BraA09t39974Z Brassica rapa HOM05D007963 ORTHO05D009967 2.2e-12 76.3 96 45.8
Phvul.011G012801 Phaseolus vulgaris HOM05D007963 ORTHO05D009967 2.2e-12 76.3 60 58.3
BolC8t50349H Brassica oleracea HOM05D007963 ORTHO05D009967 3.7e-12 75.5 96 45.8
BcaNung06087 Brassica carinata HOM05D007963 ORTHO05D009967 2.4e-11 72.8 77 50.6
CARHR161770 Cardamine hirsuta HOM05D007963 ORTHO05D009967 2.4e-11 72.8 103 44.7
Medtr4g039540 Medicago truncatula HOM05D007963 ORTHO05D009967 4.1e-11 72.0 110 40.9
Carub.0005s1839 Capsella rubella HOM05D007963 ORTHO05D009967 5.4e-11 71.6 96 42.7
BcaC02g09285 Brassica carinata HOM05D007963 ORTHO05D009967 7.1e-11 71.2 96 44.8
A04p07310 Brassica napus HOM05D007963 ORTHO05D009967 1.2e-10 70.5 96 44.8
BraA04t16426Z Brassica rapa HOM05D007963 ORTHO05D009967 1.2e-10 70.5 96 44.8
AL5G32620 Arabidopsis lyrata HOM05D007963 ORTHO05D009967 1.6e-10 70.1 52 65.4
Os03g0217000 Oryza sativa ssp. japonica HOM05D007963 ORTHO05D009967 2.7e-10 69.3 58 58.6
Aa31LG10G7140 Aethionema arabicum HOM05D007963 ORTHO05D009967 3.5e-10 68.9 117 40.2
Zm00001eb400040 Zea mays HOM05D007963 ORTHO05D009967 3.0e-09 65.9 53 60.4
AT3G52070 Arabidopsis thaliana HOM05D007963 ORTHO05D009967 6.6e-09 64.7 50 62.0
BcaB02g08592 Brassica carinata HOM05D007963 ORTHO05D009967 8.6e-09 64.3 50 60.0
SEGI_13442 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 8.9e-06 54.3 49 57.1
SEGI_37070 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 8.9e-06 54.3 49 57.1


User provided reference genes

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