Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 1.5e-209 732.6 378 100.0
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 9.1e-183 643.7 382 86.4
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 3.5e-182 641.7 382 85.6
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 2.4e-175 619.0 382 81.9
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 9.1e-175 617.1 382 81.9
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 2.4e-167 592.4 383 79.9
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 7.7e-166 587.4 383 77.3
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 5.0e-165 584.7 383 78.6
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 5.6e-164 581.3 385 77.4
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 5.2e-162 574.7 378 76.7
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 2.0e-161 572.8 384 76.0
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 2.6e-161 572.4 382 76.2
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.6e-161 572.4 382 76.2
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 9.8e-161 570.5 385 75.3
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 9.8e-161 570.5 385 75.3
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 1.7e-160 569.7 383 75.7
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.7e-160 568.5 381 75.9
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.7e-160 568.5 381 75.9
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 3.7e-160 568.5 378 74.9
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 2.4e-159 565.8 383 75.7
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 2.4e-159 565.8 383 75.7
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 3.2e-159 565.5 389 72.5
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.2e-159 565.5 380 75.5
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 5.4e-159 564.7 385 75.8
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 9.2e-159 563.9 384 75.5
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.6e-158 563.1 379 74.7
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 2.0e-158 562.8 382 75.1
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 2.7e-158 562.4 340 80.3
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 7.8e-158 560.8 383 74.2
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 1.3e-157 560.1 386 73.6
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 3.0e-157 558.9 391 72.9
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 6.6e-157 557.8 388 74.5
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 8.6e-157 557.4 386 72.5
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 1.1e-156 557.0 382 73.6
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 3.3e-156 555.4 390 71.8
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 5.6e-156 554.7 389 75.1
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 5.6e-156 554.7 383 75.2
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 9.5e-156 553.9 387 73.9
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 3.6e-155 552.0 381 75.3
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 3.6e-155 552.0 381 75.3
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 6.2e-155 551.2 380 73.9
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 1.4e-154 550.1 391 71.4
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 1.8e-154 549.7 407 70.0
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.8e-154 549.7 386 73.6
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 5.2e-154 548.1 380 73.2
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 5.2e-154 548.1 386 73.3
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 6.8e-154 547.7 393 71.0
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 8.9e-154 547.4 380 73.4
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 1.2e-153 547.0 394 72.3
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 1.5e-153 546.6 380 73.4
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.5e-153 546.6 388 72.4
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 2.0e-153 546.2 383 71.8
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 3.4e-153 545.4 384 72.9
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 5.8e-153 544.7 382 72.5
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 7.5e-153 544.3 391 71.9
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 7.5e-153 544.3 299 85.6
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 1.3e-152 543.5 388 72.9
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 2.2e-152 542.7 384 73.2
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 2.2e-152 542.7 331 79.8
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 4.9e-152 541.6 386 73.8
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 6.4e-152 541.2 388 73.2
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.2e-150 537.0 379 73.6
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 1.6e-150 536.6 380 73.7
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 1.3e-149 533.5 384 70.8
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 1.7e-149 533.1 327 80.1
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 3.9e-149 531.9 385 71.9
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 6.6e-149 531.2 381 70.9
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.5e-148 530.0 377 71.6
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 1.9e-148 529.6 395 68.6
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 4.3e-148 528.5 381 70.3
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 2.8e-147 525.8 428 65.2
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.6e-147 525.4 383 71.5
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 2.3e-146 522.7 458 61.4
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 6.8e-146 521.2 304 79.6
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 6.8e-146 521.2 385 71.4
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.2e-145 520.4 382 71.2
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.5e-140 503.4 381 67.2
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 5.6e-140 501.5 424 64.4
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 2.1e-139 499.6 382 69.9
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 1.1e-138 497.3 283 82.3
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 3.1e-138 495.7 387 68.2
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 3.1e-138 495.7 491 58.5
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 4.4e-137 491.9 390 65.1
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 3.8e-136 488.8 382 68.8
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 3.8e-136 488.8 330 69.4
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 1.9e-135 486.5 378 68.0
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 4.1e-135 485.3 381 66.7
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.1e-132 477.2 385 66.5
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.3e-132 475.7 287 79.4
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 5.6e-132 474.9 395 66.3
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 6.2e-131 471.5 304 73.0
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.1e-130 469.2 395 63.5
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 3.1e-130 469.2 296 75.3
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.1e-123 446.4 395 60.8
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.1e-123 446.4 395 60.8
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 6.4e-120 434.9 366 64.5
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 4.9e-112 408.7 319 68.0
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 3.2e-111 406.0 384 61.2
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 3.7e-107 392.5 228 80.7
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.1e-106 391.0 296 62.2
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.4e-106 389.8 293 62.5
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 6.5e-104 381.7 354 54.0
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 7.9e-102 374.8 213 82.6
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 7.9e-102 374.8 213 82.6
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 7.9e-102 374.8 213 82.6
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 6.7e-101 371.7 249 75.9
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 8.2e-99 364.8 293 57.3
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 1.7e-96 357.1 217 73.3
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 8.7e-93 344.7 213 77.0
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 2.1e-86 323.6 292 59.9
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 1.3e-83 314.3 290 51.0
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 3.9e-77 292.7 230 63.0
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 6.7e-77 292.0 177 78.5
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 3.3e-76 289.7 304 47.4
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 8.2e-75 285.0 285 48.1
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 6.7e-69 265.4 157 81.5
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 3.7e-67 259.6 278 45.7
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 2.2e-59 233.8 135 82.2
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 4.6e-41 172.9 161 51.6
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 1.0e-40 171.8 108 73.1
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 2.3e-40 170.6 166 59.6
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 8.3e-35 152.1 108 66.7
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.3e-32 144.8 110 66.4
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 1.7e-32 144.4 97 67.0
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 8.3e-27 125.6 87 67.8
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 1.1e-21 108.6 64 76.6
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 1.6e-17 94.7 49 85.7
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 1.6e-17 94.7 49 85.7
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 6.0e-09 66.2 41 78.0
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 2.5e-07 60.8 106 45.3
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 2.8e-06 57.4 43 60.5


User provided reference genes

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