Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 2.0e-205 718.8 347 100.0
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 9.9e-192 673.3 345 92.8
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 2.7e-189 665.2 345 92.5
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 6.4e-183 644.0 345 89.3
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.4e-182 642.9 345 89.0
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.1e-179 633.3 345 88.1
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.9e-174 615.9 344 86.0
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 1.9e-174 615.9 344 85.8
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 1.3e-164 583.2 347 79.0
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 2.8e-162 575.5 346 80.1
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 1.3e-159 566.6 347 76.9
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 3.8e-159 565.1 347 78.7
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 3.8e-159 565.1 349 77.1
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 6.4e-159 564.3 347 76.9
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 3.2e-158 562.0 346 76.3
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 5.5e-158 561.2 343 77.3
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 5.5e-158 561.2 349 79.1
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 1.6e-157 559.7 376 73.9
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 3.5e-157 558.5 347 77.5
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 6.0e-157 557.8 345 77.1
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 7.9e-157 557.4 344 77.6
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 1.0e-156 557.0 349 77.1
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 1.3e-156 556.6 349 78.2
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 2.3e-156 555.8 349 76.2
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 3.9e-156 555.1 345 76.8
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 5.1e-156 554.7 345 77.4
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 4.3e-155 551.6 343 76.7
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 5.6e-155 551.2 338 78.1
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 7.4e-155 550.8 344 77.0
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 9.6e-155 550.4 345 77.7
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.1e-154 549.3 347 77.2
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 2.8e-154 548.9 343 77.0
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 2.8e-154 548.9 343 76.7
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 6.2e-154 547.7 345 77.4
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 1.8e-153 546.2 347 76.7
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 2.0e-152 542.7 344 75.9
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 1.3e-151 540.0 347 73.8
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.9e-151 538.9 347 74.4
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 1.1e-150 537.0 345 75.4
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 5.5e-150 534.6 349 74.5
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 5.5e-150 534.6 348 75.6
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 7.1e-150 534.3 344 74.7
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.2e-149 533.5 345 74.8
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 2.7e-149 532.3 348 74.1
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 3.5e-149 531.9 347 73.8
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 4.6e-149 531.6 342 73.7
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 6.0e-149 531.2 347 74.9
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 1.0e-148 530.4 349 74.8
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.0e-148 530.4 345 74.2
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 1.3e-148 530.0 342 73.7
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 3.9e-148 528.5 346 73.1
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 6.7e-148 527.7 345 73.0
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 6.7e-148 527.7 348 73.0
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 8.7e-148 527.3 339 72.9
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 8.7e-148 527.3 344 74.4
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.1e-147 526.9 345 73.6
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.5e-147 526.6 348 74.7
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 1.6e-146 523.1 340 73.5
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 4.8e-146 521.5 345 69.9
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 6.3e-146 521.2 350 72.9
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 1.1e-145 520.4 347 73.2
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 1.4e-145 520.0 350 73.1
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 1.4e-145 520.0 340 72.9
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 6.9e-145 517.7 349 72.8
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 7.7e-144 514.2 349 72.5
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 7.7e-144 514.2 327 74.6
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.0e-143 513.8 377 68.2
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 2.2e-143 512.7 351 71.5
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 2.9e-143 512.3 348 71.8
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 3.8e-143 511.9 345 73.0
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 8.5e-143 510.8 350 71.1
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 8.5e-143 510.8 352 70.7
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 5.5e-142 508.1 363 68.6
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 5.5e-142 508.1 329 74.5
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 9.4e-142 507.3 347 73.2
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 3.6e-141 505.4 339 71.1
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 3.6e-141 505.4 345 70.7
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 1.0e-140 503.8 409 64.1
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 1.4e-140 503.4 351 71.8
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 3.9e-140 501.9 351 70.7
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 8.8e-140 500.7 352 71.0
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 8.8e-140 500.7 352 71.0
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 1.5e-139 500.0 344 70.3
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 2.0e-139 499.6 348 71.3
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 4.3e-139 498.4 291 79.4
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 5.7e-139 498.0 352 70.7
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 9.7e-139 497.3 346 70.8
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 1.3e-138 496.9 348 71.0
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 8.2e-138 494.2 347 71.2
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 2.4e-137 492.7 341 70.7
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 4.1e-137 491.9 301 78.1
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 8.5e-135 484.2 349 68.8
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 1.4e-134 483.4 349 68.5
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 9.4e-134 480.7 348 67.0
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 2.7e-133 479.2 283 80.2
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 2.0e-131 473.0 325 70.8
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 6.3e-130 468.0 344 66.3
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 7.0e-129 464.5 346 63.3
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 6.5e-127 458.0 349 65.3
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 3.2e-126 455.7 347 64.6
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 2.7e-125 452.6 345 66.4
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 1.2e-120 437.2 324 65.4
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 1.9e-118 429.9 248 79.0
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 2.7e-117 426.0 233 84.1
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 5.7e-115 418.3 252 81.3
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.1e-113 412.1 241 84.2
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 5.3e-113 411.8 241 84.2
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.0e-111 407.5 246 75.2
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.7e-111 406.8 246 74.8
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 1.8e-105 386.7 332 60.5
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 9.1e-105 384.4 324 61.1
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 7.7e-104 381.3 303 60.7
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.4e-100 370.5 239 75.3
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 1.8e-97 360.1 232 74.1
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 9.2e-97 357.8 328 55.2
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 5.9e-96 355.1 241 72.6
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 4.6e-88 328.9 327 52.3
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 1.0e-87 327.8 241 68.9
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 2.1e-85 320.1 243 61.7
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 2.2e-66 256.9 173 69.9
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.4e-65 254.2 196 65.8
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.0e-63 248.1 165 69.7
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.7e-63 247.3 194 64.9
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 1.3e-61 241.1 244 49.2
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 6.6e-55 218.8 199 52.3
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 4.5e-51 206.1 185 56.2
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 5.1e-47 192.6 176 58.5
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 1.7e-26 124.4 73 80.8
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 5.5e-25 119.4 79 72.2
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 1.9e-17 94.4 57 68.4
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 1.9e-09 67.8 53 62.3


User provided reference genes

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