Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 8.0e-112 407.1 210 100.0
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 7.8e-91 337.4 210 84.3
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 1.1e-84 317.0 210 81.4
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 9.2e-76 287.3 211 78.2
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 2.1e-75 286.2 211 77.7
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 7.8e-75 284.3 211 77.7
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 7.3e-73 277.7 208 72.1
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 2.3e-71 272.7 212 68.9
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 2.0e-70 269.6 212 69.3
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 9.2e-68 260.8 207 67.1
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 1.6e-67 260.0 212 67.0
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 3.0e-66 255.8 210 67.1
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 3.0e-66 255.8 183 73.8
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 3.9e-66 255.4 199 69.8
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 3.9e-66 255.4 214 65.0
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 5.1e-66 255.0 208 67.3
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 7.3e-65 251.1 212 64.6
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.2e-64 250.4 212 64.2
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 3.6e-64 248.8 214 62.6
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 3.1e-63 245.7 213 64.3
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 8.9e-63 244.2 210 66.2
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 7.6e-62 241.1 184 68.5
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 9.9e-62 240.7 181 71.3
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.3e-61 240.4 210 65.2
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 1.7e-61 240.0 212 64.2
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 2.9e-61 239.2 212 65.1
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 8.4e-61 237.7 201 63.2
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 4.2e-60 235.3 164 73.8
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 3.5e-59 232.3 179 71.5
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 4.6e-59 231.9 173 70.5
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 6.0e-59 231.5 181 66.9
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 6.0e-59 231.5 212 64.2
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 7.8e-59 231.1 181 67.4
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 1.7e-58 229.9 212 61.3
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 1.7e-58 229.9 212 62.7
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 2.3e-58 229.6 212 62.3
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 3.0e-58 229.2 212 62.3
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 3.9e-58 228.8 212 60.8
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 5.1e-58 228.4 210 61.9
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 5.1e-58 228.4 207 61.4
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 6.6e-58 228.0 185 67.6
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 6.6e-58 228.0 169 72.8
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 8.7e-58 227.6 186 64.0
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 1.5e-57 226.9 186 64.0
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 1.9e-57 226.5 184 64.1
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 1.9e-57 226.5 186 63.4
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 4.3e-57 225.3 212 61.3
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 5.6e-57 224.9 211 60.2
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 5.6e-57 224.9 211 60.2
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 7.3e-57 224.6 184 65.8
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 7.3e-57 224.6 212 59.0
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 1.6e-56 223.4 186 62.9
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.1e-56 223.0 179 65.9
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 2.8e-56 222.6 213 60.1
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 3.6e-56 222.2 212 60.8
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.8e-56 221.9 211 59.2
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 4.8e-56 221.9 172 69.2
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 8.1e-56 221.1 240 54.6
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 8.1e-56 221.1 156 74.4
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.4e-55 220.3 169 71.6
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 1.8e-55 219.9 179 67.0
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 3.1e-55 219.2 166 69.3
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 4.0e-55 218.8 211 60.7
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 6.9e-55 218.0 183 65.0
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 9.0e-55 217.6 197 59.9
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 1.2e-54 217.2 211 60.7
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 2.6e-54 216.1 210 58.6
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 4.4e-54 215.3 207 58.5
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 4.4e-54 215.3 212 59.0
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 5.8e-54 214.9 213 58.2
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 5.8e-54 214.9 166 69.9
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 5.8e-54 214.9 210 59.5
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 7.6e-54 214.5 170 68.2
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 9.9e-54 214.2 207 58.9
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 9.9e-54 214.2 170 68.2
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 1.7e-53 213.4 200 58.0
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 2.2e-53 213.0 210 58.1
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 2.2e-53 213.0 203 62.1
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 4.9e-53 211.8 167 68.3
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 4.9e-53 211.8 163 69.3
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.1e-52 210.7 157 70.1
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 1.9e-52 209.9 163 67.5
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 1.9e-52 209.9 210 56.2
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.4e-52 209.5 161 68.9
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 5.4e-52 208.4 205 57.6
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 5.4e-52 208.4 165 67.9
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 9.3e-52 207.6 174 62.6
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 2.7e-51 206.1 135 78.5
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 3.5e-51 205.7 163 66.3
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 4.6e-51 205.3 212 56.6
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 1.0e-50 204.1 168 66.1
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.3e-50 203.8 191 57.6
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 6.6e-50 201.4 163 66.3
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 7.3e-49 198.0 131 74.8
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 3.6e-48 195.7 146 68.5
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 8.1e-48 194.5 165 62.4
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 6.0e-43 178.3 191 52.9
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 1.0e-42 177.6 145 66.9
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.5e-41 173.7 208 48.1
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 1.0e-37 161.0 223 44.4
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.2e-35 154.1 134 60.4
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.3e-34 150.6 101 76.2
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 1.3e-32 144.1 127 57.5
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 1.2e-30 137.5 132 52.3
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 5.0e-29 132.1 140 47.1
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 8.4e-29 131.3 118 61.9
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 1.9e-25 120.2 110 60.9
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 2.7e-19 99.8 70 70.0
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 6.3e-16 88.6 133 45.1
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 2.4e-07 60.1 184 26.6
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.2e-06 57.8 176 24.4
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 5.9e-06 55.5 98 27.6


User provided reference genes

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