Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_04546 Corchorus olitorius HOM05D015467 ORTHO05D001819 7.6e-98 360.5 186 100.0
COL.COLO4_11312 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.1e-91 340.1 186 95.2
COL.COLO4_24558 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.8e-67 259.6 186 72.6
COL.COLO4_24557 Corchorus olitorius HOM05D015467 ORTHO05D001819 3.1e-59 232.3 182 65.9
COL.COLO4_04545 Corchorus olitorius HOM05D015467 ORTHO05D001819 5.9e-58 228.0 185 68.1
Thecc.10G106100 Theobroma cacao HOM05D015467 ORTHO05D001819 9.4e-56 220.7 184 62.0
COL.COLO4_03638 Corchorus olitorius HOM05D015467 ORTHO05D001819 2.6e-45 186.0 186 58.6
COL.COLO4_34737 Corchorus olitorius HOM05D015467 ORTHO05D001819 4.1e-43 178.7 185 56.8
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 3.3e-16 89.4 167 38.3
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 5.6e-16 88.6 174 32.2
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 2.6e-13 79.7 173 30.6
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 1.3e-12 77.4 184 34.8
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 4.9e-12 75.5 163 33.1
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 8.3e-12 74.7 182 31.3
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 8.3e-12 74.7 164 31.7
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 3.5e-10 69.3 184 31.0
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 7.8e-10 68.2 178 29.8
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 1.3e-09 67.4 156 28.2
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.3e-09 67.4 185 30.8
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-09 67.0 177 31.1
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.7e-09 67.0 172 31.4
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.3e-09 66.6 152 29.6
Migut.M01954 Erythranthe guttata HOM05D009438 ORTHO05D010870 8.6e-09 64.7 152 28.3
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-08 63.2 177 30.5
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 3.3e-08 62.8 165 27.9
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 3.3e-08 62.8 148 29.7
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 4.3e-08 62.4 174 27.6
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.3e-08 61.6 151 30.5
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.3e-08 61.6 151 30.5
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 9.5e-08 61.2 184 29.3
Oeu000482.1 Olea europaea HOM05D009438 ORTHO05D010870 1.2e-07 60.8 180 26.7
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-07 60.5 182 28.6
Lalb_Chr14g0366281 Lupinus albus HOM05D007995 ORTHO05D001819 1.6e-07 60.5 187 30.5
Aqoxy2G02209 Aquilegia oxysepala HOM05D030271 ORTHO05D026710 2.1e-07 60.1 181 28.7
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-07 60.1 177 29.4
Dinv22850 Davidia involucrata HOM05D009438 ORTHO05D010870 2.1e-07 60.1 166 25.3
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 2.1e-07 60.1 182 28.6
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 2.1e-07 60.1 182 28.6
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 3.6e-07 59.3 145 29.7
Thhalv10011818m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 3.6e-07 59.3 172 27.9
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.7e-07 58.9 175 29.1
Sed0025474 Sechium edule HOM05D003146 ORTHO05D001819 6.2e-07 58.5 156 28.8
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 6.2e-07 58.5 184 28.8
AT1G48020 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 8.0e-07 58.2 172 27.9
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 8.0e-07 58.2 174 25.9
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.0e-07 58.2 148 28.4
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-06 57.8 177 27.7
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-06 57.8 177 28.8
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.4e-06 57.4 172 27.9
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 1.4e-06 57.4 147 27.2
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 1.4e-06 57.4 172 26.7
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.4e-06 57.4 174 28.7
Medtr6g023935 Medicago truncatula HOM05D007995 ORTHO05D001819 1.8e-06 57.0 174 31.6
C08p05630 Brassica napus HOM05D003146 ORTHO05D001819 2.3e-06 56.6 172 26.2
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.3e-06 56.6 177 28.8
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.3e-06 56.6 176 27.8
Migut.M00123 Erythranthe guttata HOM05D009438 ORTHO05D010870 2.3e-06 56.6 171 29.8
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 2.3e-06 56.6 172 26.7
TWI09G0175 Tripterygium wilfordii HOM05D003146 ORTHO05D001819 2.3e-06 56.6 142 31.0
BolC8t47376H Brassica oleracea HOM05D003146 ORTHO05D001819 3.1e-06 56.2 172 26.2
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.1e-06 56.2 179 27.4
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.0e-06 55.8 179 28.5
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.0e-06 55.8 145 29.7
Migut.I00086 Erythranthe guttata HOM05D062370 ORTHO05D001819 5.2e-06 55.5 167 28.7
Potri.006G134900 Populus trichocarpa HOM05D004113 ORTHO05D003404 5.2e-06 55.5 192 28.6
A08p05340 Brassica napus HOM05D003146 ORTHO05D001819 6.8e-06 55.1 172 25.6
BraSC267t45946Z Brassica rapa HOM05D003146 ORTHO05D001819 6.8e-06 55.1 172 25.6
BcaC05g27598 Brassica carinata HOM05D003146 ORTHO05D001819 8.9e-06 54.7 156 26.9
A05p21240 Brassica napus HOM05D003146 ORTHO05D001819 8.9e-06 54.7 156 26.9
C05p35840 Brassica napus HOM05D003146 ORTHO05D001819 8.9e-06 54.7 156 26.9
BolC5t32301H Brassica oleracea HOM05D003146 ORTHO05D001819 8.9e-06 54.7 156 26.9
BraA05t21032Z Brassica rapa HOM05D003146 ORTHO05D001819 8.9e-06 54.7 156 26.9
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 8.9e-06 54.7 119 28.6
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 8.9e-06 54.7 152 28.3
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.9e-06 54.7 177 28.2


User provided reference genes

Program Settings