Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 0.0e+00 1075.1 546 100.0
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 9.6e-242 840.1 571 74.6
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 1.9e-237 825.9 535 76.4
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.6e-228 796.2 535 73.6
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.7e-228 795.4 535 73.5
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 1.0e-227 793.5 535 73.5
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 8.5e-174 614.4 545 58.3
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 4.9e-169 598.6 556 57.9
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 2.9e-161 572.8 548 56.8
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 3.5e-159 565.8 544 55.3
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 8.6e-158 561.2 539 56.2
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 2.8e-156 556.2 540 54.8
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 6.8e-155 551.6 534 55.1
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 7.5e-154 548.1 542 54.8
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 9.2e-152 541.2 544 54.2
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 2.3e-150 536.6 549 53.7
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 6.2e-148 528.5 545 52.5
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 1.1e-147 527.7 544 51.8
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 1.8e-147 526.9 363 75.2
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 4.4e-146 522.3 530 53.4
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 2.9e-145 519.6 461 58.8
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.4e-144 516.5 556 51.6
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 5.4e-144 515.4 543 51.6
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 4.6e-143 512.3 501 53.9
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 2.3e-142 510.0 546 50.2
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 3.0e-142 509.6 542 51.8
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 3.9e-142 509.2 560 50.9
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 5.1e-142 508.8 519 53.4
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 5.1e-142 508.8 544 51.8
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 6.6e-142 508.4 545 51.9
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 8.6e-142 508.1 539 53.1
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 3.6e-140 502.7 537 51.0
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 6.2e-140 501.9 534 51.1
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 6.2e-140 501.9 536 50.6
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 1.1e-139 501.1 537 52.0
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 1.4e-139 500.7 537 50.7
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 5.2e-139 498.8 538 50.7
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 8.9e-139 498.0 537 50.7
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.5e-138 497.3 556 50.5
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 4.4e-138 495.7 535 51.4
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.1e-136 491.1 536 51.1
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 9.2e-136 488.0 501 53.3
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 9.2e-136 488.0 546 50.4
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 1.2e-135 487.6 535 50.1
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 6.0e-135 485.3 577 49.7
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 5.1e-134 482.3 539 49.9
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 5.1e-134 482.3 546 48.7
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 1.5e-133 480.7 544 49.8
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 2.5e-133 479.9 549 48.5
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 2.5e-133 479.9 565 48.1
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.6e-132 477.2 540 49.4
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 6.2e-132 475.3 508 52.0
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.5e-130 470.7 493 52.9
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 3.4e-130 469.5 563 47.8
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 5.8e-130 468.8 546 48.5
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 5.8e-130 468.8 540 48.7
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 9.9e-130 468.0 553 49.4
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 1.7e-129 467.2 546 48.7
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 3.8e-129 466.1 548 49.3
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 7.1e-128 461.8 540 48.1
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 1.1e-125 454.5 532 48.9
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 1.1e-125 454.5 532 48.9
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 4.3e-125 452.6 501 50.5
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 1.3e-124 451.1 538 47.8
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 3.1e-123 446.4 549 46.6
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 1.9e-120 437.2 542 47.6
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 2.3e-118 430.3 528 44.5
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 1.6e-116 424.1 391 57.3
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.8e-115 420.6 549 44.1
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 5.3e-115 419.1 491 47.0
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.2e-103 381.3 552 42.0
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 1.1e-101 374.8 297 65.7
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 1.8e-99 367.5 548 39.1
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 1.5e-98 364.4 550 37.8
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.6e-95 354.4 396 50.5
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 8.8e-94 348.6 362 53.3
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 2.2e-92 344.0 515 41.9
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 2.4e-91 340.5 361 50.7
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 3.1e-91 340.1 386 48.7
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 4.2e-88 329.7 548 38.0
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.0e-85 320.9 551 37.2
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.8e-78 297.7 392 45.4
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.0e-77 294.3 553 34.4
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 9.5e-56 222.2 564 30.7
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 9.5e-40 169.1 175 48.6
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 1.4e-38 165.2 157 54.1
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 6.8e-38 162.9 191 49.7
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 5.1e-25 120.2 144 47.2
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 4.0e-22 110.5 120 48.3
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 4.4e-21 107.1 121 49.6
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 3.3e-08 64.3 180 26.7
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 4.0e-06 57.4 69 40.6


User provided reference genes

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