Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 5.9e-32 140.2 68 100.0
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 2.6e-19 98.2 71 73.2
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 6.3e-18 93.6 68 69.1
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.1e-17 92.8 68 69.1
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 9.1e-17 89.7 68 67.6
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 9.1e-17 89.7 68 69.1
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.2e-16 89.4 68 66.2
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 2.0e-16 88.6 68 66.2
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 3.8e-15 84.3 68 61.8
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 3.8e-15 84.3 68 61.8
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 5.0e-15 84.0 68 61.8
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.5e-15 83.6 68 60.3
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 6.5e-15 83.6 68 64.7
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 8.5e-15 83.2 68 60.3
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 8.5e-15 83.2 68 60.3
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.5e-14 82.4 68 60.3
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.5e-14 82.4 68 60.3
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.5e-14 82.4 68 61.8
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 1.9e-14 82.0 68 60.3
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.9e-14 82.0 68 57.4
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.9e-14 82.0 68 60.3
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.5e-14 81.6 68 63.2
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 3.2e-14 81.3 68 61.8
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 3.2e-14 81.3 68 61.8
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.2e-14 81.3 67 59.7
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 3.2e-14 81.3 68 52.9
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 4.2e-14 80.9 68 58.8
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 4.2e-14 80.9 68 58.8
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 7.2e-14 80.1 68 58.8
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 9.4e-14 79.7 68 57.4
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 9.4e-14 79.7 68 55.9
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.2e-13 79.3 68 60.3
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 1.2e-13 79.3 68 55.9
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.6e-13 79.0 68 55.9
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.1e-13 78.6 69 58.0
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 4.7e-13 77.4 68 54.4
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 8.0e-13 76.6 67 53.7
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 8.0e-13 76.6 68 52.9
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 8.0e-13 76.6 68 54.4
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.0e-12 76.3 58 62.1
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.0e-12 76.3 58 63.8
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 3.0e-12 74.7 68 58.8
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 4.0e-12 74.3 68 55.9
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 4.0e-12 74.3 68 51.5
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 4.0e-12 74.3 68 52.9
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 4.0e-12 74.3 68 52.9
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 5.2e-12 73.9 68 55.9
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 5.2e-12 73.9 68 51.5
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 5.2e-12 73.9 68 52.9
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 5.2e-12 73.9 67 52.2
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 6.8e-12 73.6 68 54.4
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 1.2e-11 72.8 68 52.9
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 1.5e-11 72.4 68 44.1
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.5e-11 72.4 69 47.8
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.0e-11 72.0 68 54.4
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 2.0e-11 72.0 68 51.5
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 2.6e-11 71.6 67 49.3
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 4.4e-11 70.9 68 51.5
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 5.7e-11 70.5 68 52.9
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 5.7e-11 70.5 67 47.8
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 5.7e-11 70.5 65 53.8
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.3e-10 69.3 68 52.9
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.3e-10 69.3 68 48.5
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.7e-10 68.9 69 50.7
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.7e-10 68.9 69 52.2
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 1.7e-10 68.9 67 49.3
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 2.8e-10 68.2 68 51.5
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 2.8e-10 68.2 68 47.1
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 3.7e-10 67.8 68 50.0
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 4.8e-10 67.4 67 49.3
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 4.8e-10 67.4 70 52.9
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 4.8e-10 67.4 68 50.0
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 6.3e-10 67.0 70 52.9
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.1e-09 66.2 68 45.6
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.1e-09 66.2 68 45.6
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.1e-09 66.2 68 45.6
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 1.4e-09 65.9 68 50.0
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.4e-09 65.9 68 47.1
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 1.8e-09 65.5 68 51.5
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 1.8e-09 65.5 68 48.5
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 2.4e-09 65.1 68 47.1
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.4e-09 65.1 68 42.6
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 3.1e-09 64.7 68 50.0
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 3.1e-09 64.7 68 50.0
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 3.1e-09 64.7 68 50.0
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 3.1e-09 64.7 68 50.0
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 3.1e-09 64.7 68 50.0
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 3.1e-09 64.7 68 50.0
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 4.1e-09 64.3 68 51.5
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 4.1e-09 64.3 60 53.3
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 4.1e-09 64.3 68 45.6
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 5.4e-09 63.9 70 50.0
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 9.1e-09 63.2 68 42.6
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 9.1e-09 63.2 68 45.6
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.0e-08 62.0 70 48.6
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 2.7e-08 61.6 68 45.6
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 4.5e-08 60.8 69 47.8
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.7e-07 58.9 68 44.1
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.7e-07 58.9 68 44.1


User provided reference genes

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