Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 9.6e-62 240.0 119 100.0
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 1.1e-46 189.9 117 82.9
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.8e-45 185.3 114 80.7
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 3.1e-44 181.8 114 78.9
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 4.0e-44 181.4 117 78.6
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 7.6e-43 177.2 114 77.2
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 9.9e-43 176.8 100 82.0
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 1.7e-42 176.0 118 72.0
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 1.7e-42 176.0 118 72.0
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 2.2e-42 175.6 115 70.4
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 6.4e-42 174.1 116 71.6
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 6.4e-42 174.1 116 68.1
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 1.1e-41 173.3 118 66.9
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 5.4e-41 171.0 112 74.1
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 1.2e-40 169.9 117 75.2
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 4.6e-40 167.9 103 71.8
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 6.0e-40 167.5 111 72.1
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 7.9e-40 167.2 101 75.2
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 7.9e-40 167.2 112 68.8
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.0e-39 166.8 117 68.4
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 1.0e-39 166.8 101 75.2
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 1.3e-39 166.4 129 62.8
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 1.3e-39 166.4 109 72.5
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 1.3e-39 166.4 102 76.5
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 1.8e-39 166.0 117 67.5
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.8e-39 166.0 117 68.4
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 3.9e-39 164.9 112 68.8
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 6.7e-39 164.1 117 66.7
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 8.7e-39 163.7 111 72.1
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.1e-38 163.3 117 66.7
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 1.9e-38 162.5 114 67.5
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.9e-38 162.5 101 74.3
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 2.5e-38 162.2 101 71.3
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 2.5e-38 162.2 101 74.3
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 2.5e-38 162.2 92 79.3
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 3.3e-38 161.8 104 70.2
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 4.3e-38 161.4 117 66.7
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 5.6e-38 161.0 112 67.9
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 5.6e-38 161.0 111 70.3
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.3e-37 159.8 119 66.4
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.6e-37 159.5 112 69.6
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.6e-37 159.5 108 73.1
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.6e-37 159.5 101 73.3
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 2.1e-37 159.1 119 65.5
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 3.7e-37 158.3 108 72.2
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 3.7e-37 158.3 114 68.4
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 6.2e-37 157.5 111 69.4
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 8.1e-37 157.1 108 69.4
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 8.1e-37 157.1 108 69.4
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 8.1e-37 157.1 108 69.4
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 8.1e-37 157.1 101 74.3
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 1.1e-36 156.8 100 72.0
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 1.4e-36 156.4 112 67.9
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 1.8e-36 156.0 112 67.0
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 1.8e-36 156.0 112 67.0
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.8e-36 156.0 112 67.9
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 2.4e-36 155.6 116 65.5
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 2.4e-36 155.6 112 67.0
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 3.1e-36 155.2 101 71.3
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 4.0e-36 154.8 100 71.0
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 4.0e-36 154.8 117 67.5
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 5.3e-36 154.5 102 71.6
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 5.3e-36 154.5 119 66.4
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 6.9e-36 154.1 112 66.1
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 9.0e-36 153.7 111 65.8
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.2e-35 153.3 115 65.2
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.2e-35 153.3 105 70.5
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 2.0e-35 152.5 112 65.2
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.6e-35 152.1 114 62.3
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 7.6e-35 150.6 108 67.6
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 7.6e-35 150.6 101 66.3
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 7.6e-35 150.6 92 75.0
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 1.3e-34 149.8 117 63.2
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.7e-34 149.4 105 67.6
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.7e-34 149.4 97 72.2
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 1.7e-34 149.4 111 64.0
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 2.9e-34 148.7 104 69.2
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 8.4e-34 147.1 96 71.9
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 8.4e-34 147.1 100 68.0
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.4e-33 146.4 92 71.7
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 2.5e-33 145.6 95 67.4
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.2e-33 145.2 152 51.3
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 4.2e-33 144.8 103 67.0
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 4.2e-33 144.8 115 62.6
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 5.5e-33 144.4 103 62.1
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 1.2e-32 143.3 105 62.9
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 2.7e-32 142.1 110 59.1
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 2.7e-32 142.1 93 66.7
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.3e-31 139.8 93 65.6
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 6.7e-31 137.5 95 63.2
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 8.7e-31 137.1 93 63.4
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 8.7e-31 137.1 95 63.2
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 8.7e-31 137.1 107 62.6
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 2.5e-30 135.6 93 64.5
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 2.5e-30 135.6 93 64.5
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 3.3e-30 135.2 88 76.1
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 9.6e-30 133.7 93 64.5
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 6.9e-28 127.5 101 58.4
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 6.9e-28 127.5 77 77.9
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 2.0e-27 125.9 79 74.7
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 5.8e-27 124.4 75 77.3
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 6.5e-26 120.9 68 80.9
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 5.5e-25 117.9 68 73.5
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 3.5e-24 115.2 81 70.4
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 1.1e-22 110.2 85 67.1
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 5.7e-22 107.8 81 70.4
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.3e-21 106.7 80 71.2
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 8.2e-21 104.0 99 50.5
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 1.8e-20 102.8 114 49.1
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 4.1e-20 101.7 85 62.4
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 2.0e-19 99.4 95 47.4
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 7.7e-19 97.4 127 40.9
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 6.1e-16 87.8 98 45.9
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 6.1e-16 87.8 62 58.1
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.3e-14 82.0 101 46.5
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 6.3e-13 77.8 61 62.3
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 9.1e-12 73.9 44 75.0
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 5.0e-10 68.2 66 42.4


User provided reference genes

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