Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_03330 Corchorus olitorius HOM05D000129 ORTHO05D158770 1.3e-24 115.5 55 100.0
Thecc.09G191600 Theobroma cacao HOM05D000129 ORTHO05D000144 9.3e-20 99.4 55 85.5
Duzib170G0665 Durio zibethinus HOM05D000129 ORTHO05D000144 1.8e-18 95.1 55 83.6
Gohir.D08G027700 Gossypium hirsutum HOM05D000129 ORTHO05D000144 4.3e-17 90.5 56 82.1
Gorai.004G024800 Gossypium raimondii HOM05D000129 ORTHO05D000144 4.3e-17 90.5 56 82.1
Gohir.A08G017200 Gossypium hirsutum HOM05D000129 ORTHO05D000144 7.4e-17 89.7 55 80.0
TWI34G1012 Tripterygium wilfordii HOM05D000129 ORTHO05D000144 7.9e-11 69.7 55 67.3
Potri.018G139800 Populus trichocarpa HOM05D000129 ORTHO05D000144 9.7e-09 62.8 56 60.7
TWI63G0331 Tripterygium wilfordii HOM05D000129 ORTHO05D000144 9.7e-09 62.8 56 60.7
CANSAT01G0630 Cannabis sativa HOM05D000129 ORTHO05D000144 1.6e-08 62.0 54 63.0
CiPaw.07G198800 Carya illinoinensis HOM05D000129 ORTHO05D000144 1.6e-08 62.0 54 61.1
Cpa.g.sc115.64 Carica papaya HOM05D000129 ORTHO05D000144 2.8e-08 61.2 55 58.2
MSTRG.19361 Avicennia marina HOM05D000129 ORTHO05D000144 6.3e-08 60.1 56 58.9
GSVIVG01029283001 Vitis vinifera HOM05D000129 ORTHO05D000144 6.3e-08 60.1 55 63.6
Sabra06G0054300 Salix brachista HOM05D000129 ORTHO05D000144 8.2e-08 59.7 56 62.5
Hund06697 Selenicereus undatus HOM05D000129 ORTHO05D000144 1.1e-07 59.3 51 62.7
Potri.006G072900 Populus trichocarpa HOM05D000129 ORTHO05D000144 3.1e-07 57.8 56 60.7
TAR626G1733 Trochodendron aralioides HOM05D000129 ORTHO05D000144 4.1e-07 57.4 55 54.5
AUR62027427 Chenopodium quinoa HOM05D000129 ORTHO05D000144 5.3e-07 57.0 52 63.5
AUR62031270 Chenopodium quinoa HOM05D000129 ORTHO05D000144 5.3e-07 57.0 52 63.5
BcaC09g51767 Brassica carinata HOM05D000129 ORTHO05D011232 6.9e-07 56.6 55 54.5
CiPaw.08G031500 Carya illinoinensis HOM05D000129 ORTHO05D000144 6.9e-07 56.6 54 61.1
Manes.06G017700 Manihot esculenta HOM05D000129 ORTHO05D000144 6.9e-07 56.6 55 56.4
Oeu035449.1 Olea europaea HOM05D000129 ORTHO05D000144 9.0e-07 56.2 52 63.5
THA.LOC104814642 Tarenaya hassleriana HOM05D000129 ORTHO05D000144 1.2e-06 55.8 55 52.7
Aa31LG2G20650 Aethionema arabicum HOM05D000129 ORTHO05D000144 1.5e-06 55.5 55 49.1
A01p08280 Brassica napus HOM05D000129 ORTHO05D000144 1.5e-06 55.5 55 54.5
BraA01t00776Z Brassica rapa HOM05D000129 ORTHO05D000144 1.5e-06 55.5 55 54.5
Ah.09g228550 Amaranthus hybridus HOM05D000129 ORTHO05D000144 2.0e-06 55.1 51 52.9
Eucgr.D01503 Eucalyptus grandis HOM05D000129 ORTHO05D000144 2.0e-06 55.1 47 59.6
CiPaw.07G199000 Carya illinoinensis HOM05D000129 ORTHO05D000144 2.6e-06 54.7 48 60.4
C01p09320 Brassica napus HOM05D000129 ORTHO05D000144 3.4e-06 54.3 55 49.1
BolC1t00920H Brassica oleracea HOM05D000129 ORTHO05D000144 3.4e-06 54.3 55 49.1
Haze_22045 Corylus avellana HOM05D000129 ORTHO05D000144 3.4e-06 54.3 52 61.5
MELO3C003950.2 Cucumis melo HOM05D000129 ORTHO05D000144 3.4e-06 54.3 56 53.6
Sed0019651 Sechium edule HOM05D000129 ORTHO05D000144 3.4e-06 54.3 55 54.5
Migut.J00781 Erythranthe guttata HOM05D000129 ORTHO05D000144 4.5e-06 53.9 59 55.9
Sp7g27710 Schrenkiella parvula HOM05D000129 ORTHO05D000144 4.5e-06 53.9 55 49.1
Glyma.13G101700 Glycine max HOM05D000129 ORTHO05D000144 5.9e-06 53.5 54 51.9
Manes.14G162600 Manihot esculenta HOM05D000129 ORTHO05D000144 5.9e-06 53.5 55 50.9
AT4G29900 Arabidopsis thaliana HOM05D000129 ORTHO05D000144 7.7e-06 53.1 55 49.1
Eucgr.C00095 Eucalyptus grandis HOM05D000129 ORTHO05D000144 7.7e-06 53.1 48 58.3
Hma1.2p1_0235F.1_g098780 Hydrangea macrophylla HOM05D000129 ORTHO05D000144 7.7e-06 53.1 57 52.6
Hma1.2p1_0478F.1_g161210 Hydrangea macrophylla HOM05D000129 ORTHO05D026354 7.7e-06 53.1 56 50.0
Thhalv10024281m.g Eutrema salsugineum HOM05D000129 ORTHO05D000144 1.0e-05 52.8 55 49.1
Sed0010376 Sechium edule HOM05D000129 ORTHO05D000144 1.0e-05 52.8 54 50.0


User provided reference genes

Program Settings