Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_03186 Corchorus olitorius HOM05D036061 ORTHO05D000167 2.5e-124 448.7 219 100.0
COL.COLO4_03050 Corchorus olitorius HOM05D036061 ORTHO05D000167 1.4e-74 283.5 183 79.2
COL.COLO4_02217 Corchorus olitorius HOM05D036061 ORTHO05D000167 1.2e-65 253.8 119 100.0
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.8e-14 83.2 135 37.8
COL.COLO4_23207 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.0e-12 77.0 130 36.9
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 2.0e-12 77.0 138 34.1
COL.COLO4_09952 Corchorus olitorius HOM05D009774 ORTHO05D000167 7.5e-12 75.1 122 37.7
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 3.1e-10 69.7 92 41.3
COL.COLO4_20671 Corchorus olitorius HOM05D000003 ORTHO05D000167 2.0e-09 67.0 74 44.6
COL.COLO4_32120 Corchorus olitorius HOM05D009774 ORTHO05D000167 4.5e-09 65.9 92 40.2
COL.COLO4_08437 Corchorus olitorius HOM05D000003 ORTHO05D000167 1.0e-08 64.7 118 30.5
COL.COLO4_29952 Corchorus olitorius HOM05D039001 ORTHO05D000167 1.0e-08 64.7 87 43.7
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.0e-08 64.7 81 42.0
Atru.chr8.838 Acer truncatum HOM05D000003 ORTHO05D000167 3.8e-08 62.8 86 38.4
COL.COLO4_05919 Corchorus olitorius HOM05D009774 ORTHO05D000167 6.6e-08 62.0 91 40.7
QL12p032525 Quercus lobata HOM05D000003 ORTHO05D000167 6.6e-08 62.0 81 34.6
Duzib093G0877 Durio zibethinus HOM05D000003 ORTHO05D000004 1.1e-07 61.2 75 42.7
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-07 61.2 104 37.5
Haze_12949 Corylus avellana HOM05D000003 ORTHO05D000167 1.9e-07 60.5 127 30.7
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-07 60.5 81 34.6
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-07 60.5 93 36.6
CANSAT80G2658 Cannabis sativa HOM05D000003 ORTHO05D000167 2.5e-07 60.1 92 31.5
Duzib205G1150 Durio zibethinus HOM05D000003 ORTHO05D000167 2.5e-07 60.1 75 40.0
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.5e-07 60.1 157 26.8
TWI73G0607 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.5e-07 60.1 80 35.0
QL02p084090 Quercus lobata HOM05D000003 ORTHO05D000167 5.6e-07 58.9 108 33.3
CSS0014223 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 7.3e-07 58.5 101 34.7
CSS0046159 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 7.3e-07 58.5 101 34.7
Duzib235G0850 Durio zibethinus HOM05D000003 ORTHO05D000167 7.3e-07 58.5 118 31.4
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 9.5e-07 58.2 96 37.5
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 57.4 93 31.2
CANSAT56G0621 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 57.4 89 30.3
Duzib150G1547 Durio zibethinus HOM05D000003 ORTHO05D000167 1.6e-06 57.4 88 37.5
Atru.chr6.1438 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 57.0 108 31.5
FvH4_1g18911 Fragaria vesca HOM05D009322 ORTHO05D010713 2.1e-06 57.0 192 26.6
QL10p036891 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-06 57.0 81 32.1
PSO170G0848 Papaver somniferum HOM05D003407 ORTHO05D001026 2.8e-06 56.6 107 35.5
Prupe.8G099500 Prunus persica HOM05D000003 ORTHO05D000167 2.8e-06 56.6 126 32.5
Atru.chr5.2963 Acer truncatum HOM05D000003 ORTHO05D000006 3.6e-06 56.2 91 31.9
RcHm_v2.0_Chr2g0147661 Rosa chinensis HOM05D000003 ORTHO05D010713 3.6e-06 56.2 76 38.2
Prupe.3G063400 Prunus persica HOM05D000003 ORTHO05D000167 4.7e-06 55.8 116 31.0
TWI77G0924 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 4.7e-06 55.8 89 37.1
Prupe.2G082600 Prunus persica HOM05D000003 ORTHO05D000167 6.1e-06 55.5 88 35.2
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 8.0e-06 55.1 85 34.1


User provided reference genes

Program Settings