Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_02893 Corchorus olitorius HOM05D006590 ORTHO05D008427 1.3e-27 125.6 61 100.0
COL.COLO4_11262 Corchorus olitorius HOM05D006590 ORTHO05D008427 1.3e-27 125.6 61 100.0
Duzib205G0486 Durio zibethinus HOM05D006590 ORTHO05D008427 3.0e-27 124.4 61 98.4
Dinv35324 Davidia involucrata HOM05D006590 ORTHO05D008427 6.7e-27 123.2 61 96.7
Oeu041046.1 Olea europaea HOM05D006590 ORTHO05D008427 6.7e-27 123.2 61 96.7
Sc13g0009780 Simmondsia chinensis HOM05D006590 ORTHO05D008427 6.7e-27 123.2 61 96.7
Thecc.03G196200 Theobroma cacao HOM05D006590 ORTHO05D008427 6.7e-27 123.2 61 96.7
CSS0003993 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 8.7e-27 122.9 61 95.1
CSS0014515 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 8.7e-27 122.9 61 95.1
Manes.06G159700 Manihot esculenta HOM05D006590 ORTHO05D008427 1.5e-26 122.1 61 93.4
CiPaw.05G251800 Carya illinoinensis HOM05D006590 ORTHO05D008427 1.9e-26 121.7 61 95.1
EL10Ac3g05300 Beta vulgaris HOM05D006590 ORTHO05D008427 2.5e-26 121.3 61 93.4
Hma1.2p1_0404F.1_g145500 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 2.5e-26 121.3 61 93.4
Hma1.2p1_0404F.1_g145510 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 2.5e-26 121.3 61 93.4
THA.LOC104800297 Tarenaya hassleriana HOM05D006590 ORTHO05D008427 3.3e-26 120.9 61 91.8
AUR62006110 Chenopodium quinoa HOM05D006590 ORTHO05D008427 4.3e-26 120.6 61 91.8
AUR62019378 Chenopodium quinoa HOM05D006590 ORTHO05D008427 4.3e-26 120.6 61 91.8
Potri.015G016801 Populus trichocarpa HOM05D006590 ORTHO05D008427 4.3e-26 120.6 61 93.4
Potri.015G017100 Populus trichocarpa HOM05D006590 ORTHO05D008427 4.3e-26 120.6 61 93.4
vmacro06540 Vaccinium macrocarpon HOM05D006590 ORTHO05D008427 4.3e-26 120.6 61 93.4
GSVIVG01038710001 Vitis vinifera HOM05D006590 ORTHO05D008427 4.3e-26 120.6 61 95.1
Atru.chr1.163 Acer truncatum HOM05D006590 ORTHO05D008427 5.7e-26 120.2 61 91.8
Actinidia08640 Actinidia chinensis HOM05D006590 ORTHO05D008427 5.7e-26 120.2 61 95.1
Glyma.06G127700 Glycine max HOM05D006590 ORTHO05D008427 5.7e-26 120.2 61 93.4
Rhsim03G0207800 Rhododendron simsii HOM05D006590 ORTHO05D008427 5.7e-26 120.2 61 93.4
RcHm_v2.0_Chr1g0380971 Rosa chinensis HOM05D006590 ORTHO05D008427 5.7e-26 120.2 61 91.8
TWI14G0328 Tripterygium wilfordii HOM05D006590 ORTHO05D008427 5.7e-26 120.2 61 91.8
Cfa016251 Carpinus fangiana HOM05D006590 ORTHO05D008427 7.4e-26 119.8 61 91.8
Haze_00189 Corylus avellana HOM05D006590 ORTHO05D008427 7.4e-26 119.8 61 91.8
Cpa.g.sc3.70 Carica papaya HOM05D006590 ORTHO05D008427 9.6e-26 119.4 61 90.2
Gohir.D12G251400 Gossypium hirsutum HOM05D006590 ORTHO05D008427 9.6e-26 119.4 61 93.4
HanXRQChr09g0250931 Helianthus annuus HOM05D006590 ORTHO05D008427 9.6e-26 119.4 61 91.8
PGR042G1173 Punica granatum HOM05D006590 ORTHO05D008427 9.6e-26 119.4 61 91.8
arahy.Tifrunner.gnm1.ann1.ICGL65 Arachis hypogaea HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 91.8
arahy.Tifrunner.gnm1.ann1.X012TI Arachis hypogaea HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 91.8
Cc02_g01670 Coffea canephora HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 90.2
FvH4_7g31750 Fragaria vesca HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 90.2
FAN01G1498 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 90.2
FAN03G2401 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 90.2
FAN06G3161 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 90.2
FAN06G3878 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 90.2
FAN10G1373 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 90.2
FAN10G2802 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 90.2
Lalb_Chr08g0240321 Lupinus albus HOM05D006590 ORTHO05D008427 1.3e-25 119.0 61 91.8
Aa31LG3G9610 Aethionema arabicum HOM05D006590 ORTHO05D008427 1.6e-25 118.6 60 95.0
Ca_16698_v3 Cicer arietinum L. HOM05D006590 ORTHO05D008427 1.6e-25 118.6 61 90.2
Sabra15G0013100 Salix brachista HOM05D006590 ORTHO05D008427 2.1e-25 118.2 61 91.8
BcaB08g35710 Brassica carinata HOM05D006590 ORTHO05D008427 2.8e-25 117.9 60 93.3
A10p10910 Brassica napus HOM05D001108 ORTHO05D001619 2.8e-25 117.9 60 93.3
C09p43300 Brassica napus HOM05D001108 ORTHO05D001619 2.8e-25 117.9 60 93.3
BolC9t57211H Brassica oleracea HOM05D006590 ORTHO05D008427 2.8e-25 117.9 60 93.3
BraA10t43179Z Brassica rapa HOM05D006590 ORTHO05D008427 2.8e-25 117.9 60 93.3
CARHR266570 Cardamine hirsuta HOM05D006590 ORTHO05D008427 2.8e-25 117.9 60 93.3
Ciclev10004491m.g Citrus clementina HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 88.5
DCAR_014541 Daucus carota HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 88.5
Eucgr.A01466 Eucalyptus grandis HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 88.5
Thhalv10012882m.g Eutrema salsugineum HOM05D006590 ORTHO05D008427 2.8e-25 117.9 60 93.3
Gohir.A12G250600 Gossypium hirsutum HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 91.8
Gorai.008G269500 Gossypium raimondii HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 91.8
Os01g0655500 Oryza sativa ssp. japonica HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 91.8
Prupe.2G311400 Prunus persica HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 91.8
QL09p009505 Quercus lobata HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 90.2
SGA_v2.0_scaffold44G16790 Striga asiatica HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 90.2
TAR375G1022 Trochodendron aralioides HOM05D006590 ORTHO05D008427 2.8e-25 117.9 61 90.2
Glyma.04G236600 Glycine max HOM05D006590 ORTHO05D008427 3.7e-25 117.5 61 90.2
AL8G28150 Arabidopsis lyrata HOM05D006590 ORTHO05D008427 4.8e-25 117.1 60 91.7
Carub.0008s1361 Capsella rubella HOM05D006590 ORTHO05D008427 4.8e-25 117.1 60 91.7
Lj1g0007393 Lotus japonicus HOM05D006590 ORTHO05D008427 4.8e-25 117.1 61 88.5
Potri.015G016375 Populus trichocarpa HOM05D006590 ORTHO05D008427 6.3e-25 116.7 61 90.2
Migut.F00225 Erythranthe guttata HOM05D006590 ORTHO05D008427 8.2e-25 116.3 61 90.2
Phvul.009G053500 Phaseolus vulgaris HOM05D006590 ORTHO05D008427 8.2e-25 116.3 61 88.5
Medtr3g091290 Medicago truncatula HOM05D006590 ORTHO05D008427 1.4e-24 115.5 61 88.5
Psat5g078080 Pisum sativum HOM05D006590 ORTHO05D008427 1.4e-24 115.5 61 88.5
VMungo1309G0677 Vigna mungo HOM05D006590 ORTHO05D008427 1.4e-24 115.5 61 88.5
Zm00001eb158040 Zea mays HOM05D006590 ORTHO05D008427 1.4e-24 115.5 61 90.2
Sp6g15580 Schrenkiella parvula HOM05D006590 ORTHO05D008427 1.8e-24 115.2 60 90.0
ATR0602G100 Amborella trichopoda HOM05D006590 ORTHO05D008427 2.4e-24 114.8 61 90.2
MD01G1219800 Malus domestica HOM05D006590 ORTHO05D008427 2.4e-24 114.8 61 88.5
AT5G53450 Arabidopsis thaliana HOM05D006590 ORTHO05D008427 3.1e-24 114.4 60 88.3
HPP92_006416 Vanilla planifolia HOM05D006590 ORTHO05D008427 3.1e-24 114.4 61 86.9
SalBow4G1653 Salvia bowleyana HOM05D006590 ORTHO05D008427 4.1e-24 114.0 61 90.2
Nitab4.5_0000714g0140 Nicotiana tabacum HOM05D006590 ORTHO05D008427 5.3e-24 113.6 61 85.2
Nitab4.5_0007081g0010 Nicotiana tabacum HOM05D006590 ORTHO05D008427 5.3e-24 113.6 61 85.2
Peaxi162Scf00550g00546 Petunia axillaris HOM05D006590 ORTHO05D008427 5.3e-24 113.6 61 85.2
Solyc03g083420.4 Solanum lycopersicum HOM05D006590 ORTHO05D008427 5.3e-24 113.6 61 85.2
Sopen03g023190 Solanum pennellii HOM05D006590 ORTHO05D008427 5.3e-24 113.6 61 85.2
PGSC0003DMG400009120 Solanum tuberosum HOM05D006590 ORTHO05D008427 5.3e-24 113.6 61 85.2
TPR.G17286 Trifolium pratense HOM05D006590 ORTHO05D008427 6.9e-24 113.2 61 85.2
Nn1g01869 Nelumbo nucifera HOM05D006590 ORTHO05D008427 1.2e-23 112.5 61 85.2
CAN.G108.67 Capsicum annuum HOM05D006590 ORTHO05D008427 2.0e-23 111.7 61 83.6
ECA232G3273 Erigeron canadensis HOM05D006590 ORTHO05D008427 2.6e-23 111.3 61 85.2
CANSAT21G0035 Cannabis sativa HOM05D006590 ORTHO05D008427 3.4e-23 110.9 61 85.2
MBI07_g07100_MAGBIO Magnolia biondii HOM05D006590 ORTHO05D008427 4.5e-23 110.5 61 85.2
Sed0010238 Sechium edule HOM05D006590 ORTHO05D008427 4.5e-23 110.5 61 85.2
PSO063G2913 Papaver somniferum HOM05D006590 ORTHO05D008427 7.6e-23 109.8 61 82.0
PSO170G2823 Papaver somniferum HOM05D006590 ORTHO05D008427 7.6e-23 109.8 61 82.0
Aqoxy5G04233 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 1.3e-22 109.0 61 80.3
ClCG05G008870 Citrullus lanatus HOM05D006590 ORTHO05D008427 1.3e-22 109.0 61 83.6
MELO3C008489.2 Cucumis melo HOM05D006590 ORTHO05D008427 1.3e-22 109.0 61 83.6
CsaV3_3G027870 Cucumis sativus L. HOM05D006590 ORTHO05D008427 1.3e-22 109.0 61 83.6
Actinidia33527 Actinidia chinensis HOM05D006590 ORTHO05D008427 1.7e-22 108.6 58 91.4
Lsat_1_v5_gn_5_75160 Lactuca sativa HOM05D006590 ORTHO05D008427 3.8e-22 107.5 62 83.9
Potri.015G016600 Populus trichocarpa HOM05D006590 ORTHO05D008427 4.6e-20 100.5 58 79.3
SEGI_37244 Sequoiadendron giganteum HOM05D006590 ORTHO05D008427 3.0e-19 97.8 61 73.8
Lj1C1015G5 Lonicera japonica HOM05D006590 ORTHO05D008427 3.3e-18 94.4 56 78.6
Mapoly0022s0163 Marchantia polymorpha HOM05D006590 ORTHO05D008427 6.3e-17 90.1 61 67.2
SMO172G0068 Selaginella moellendorffii HOM05D006590 ORTHO05D008427 3.2e-13 77.8 61 62.3
BcaC04g19592 Brassica carinata HOM05D006590 ORTHO05D008427 2.8e-09 64.7 29 96.6


User provided reference genes

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