Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.0e-82 310.1 158 100.0
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 1.2e-22 110.5 157 35.7
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 2.0e-22 109.8 156 38.5
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 2.0e-22 109.8 157 36.9
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.7e-21 106.7 157 34.4
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 1.7e-21 106.7 155 33.5
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 3.7e-21 105.5 155 36.1
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 6.4e-21 104.8 155 34.8
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 6.4e-21 104.8 155 36.1
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 1.1e-20 104.0 151 36.4
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 1.1e-20 104.0 155 32.9
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 1.4e-20 103.6 155 32.3
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 2.4e-20 102.8 155 32.3
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 3.2e-20 102.4 155 32.9
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 4.1e-20 102.1 155 34.8
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 5.4e-20 101.7 155 31.6
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 5.4e-20 101.7 155 32.9
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 9.2e-20 100.9 155 32.9
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 1.2e-19 100.5 154 33.1
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 1.6e-19 100.1 155 32.9
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.6e-19 100.1 155 32.3
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 2.0e-19 99.8 155 32.9
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 2.7e-19 99.4 155 31.0
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 3.5e-19 99.0 155 33.5
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 4.6e-19 98.6 155 32.9
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 4.6e-19 98.6 155 32.9
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 4.6e-19 98.6 155 31.6
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 4.6e-19 98.6 155 32.9
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 4.6e-19 98.6 163 34.4
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 7.8e-19 97.8 155 32.9
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 7.8e-19 97.8 154 33.1
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 7.8e-19 97.8 155 32.9
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 7.8e-19 97.8 155 32.3
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 1.0e-18 97.4 155 32.3
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 1.3e-18 97.1 155 31.0
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 2.3e-18 96.3 155 32.3
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 2.3e-18 96.3 155 33.5
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 2.3e-18 96.3 155 31.6
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 2.3e-18 96.3 155 31.6
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 3.0e-18 95.9 155 32.3
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 3.9e-18 95.5 155 32.3
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 3.9e-18 95.5 155 31.6
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.9e-18 95.5 154 32.5
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.9e-18 95.5 155 31.6
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.9e-18 95.5 155 31.6
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 5.0e-18 95.1 154 31.8
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 6.6e-18 94.7 155 31.6
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 8.6e-18 94.4 155 31.6
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 8.6e-18 94.4 155 29.7
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 1.1e-17 94.0 155 31.0
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.1e-17 94.0 154 31.8
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 1.5e-17 93.6 155 31.6
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 1.9e-17 93.2 155 31.6
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 1.9e-17 93.2 155 31.6
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.9e-17 93.2 158 31.0
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 2.5e-17 92.8 155 30.3
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 2.5e-17 92.8 154 31.8
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 2.5e-17 92.8 155 29.7
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 2.5e-17 92.8 155 31.6
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 2.5e-17 92.8 155 31.0
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 3.3e-17 92.4 155 31.6
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 3.3e-17 92.4 155 32.9
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 4.3e-17 92.0 155 32.3
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 4.3e-17 92.0 155 30.3
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 4.3e-17 92.0 155 30.3
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 4.3e-17 92.0 155 29.7
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 5.6e-17 91.7 160 30.6
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 7.3e-17 91.3 171 30.4
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 1.2e-16 90.5 155 32.9
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.6e-16 90.1 155 29.7
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 6.2e-16 88.2 139 31.7
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 6.2e-16 88.2 154 30.5
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 8.1e-16 87.8 175 29.7
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 1.4e-15 87.0 155 29.7
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 4.0e-15 85.5 155 28.4
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 5.2e-15 85.1 157 34.4
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 3.4e-14 82.4 148 29.7
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 5.8e-14 81.6 158 30.4
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 7.5e-14 81.3 143 28.7
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 7.5e-14 81.3 146 30.1
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 1.3e-13 80.5 143 30.1
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 8.3e-13 77.8 143 29.4
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.1e-12 77.4 143 31.5
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.9e-12 76.6 140 32.1
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 4.1e-12 75.5 143 28.7
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 5.4e-12 75.1 154 26.6
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 1.2e-11 73.9 105 34.3
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.2e-11 73.9 96 35.4
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 1.6e-11 73.6 143 28.0
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 6.0e-11 71.6 87 39.1
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 6.0e-11 71.6 135 29.6
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 1.0e-10 70.9 130 28.5
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 3.9e-10 68.9 132 28.0
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.8e-07 60.1 120 30.8
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 1.8e-07 60.1 120 25.0
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 5.2e-07 58.5 170 22.9
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 5.2e-07 58.5 93 31.2
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.2e-06 57.4 127 25.2
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 1.5e-06 57.0 105 33.3


User provided reference genes

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