Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_00238 Corchorus olitorius HOM05D000041 ORTHO05D162289 5.7e-14 79.7 41 100.0
Thecc.02G080200 Theobroma cacao HOM05D000041 ORTHO05D000061 8.5e-10 65.9 39 84.6
Duzib132G0309 Durio zibethinus HOM05D000041 ORTHO05D000061 2.5e-09 64.3 39 82.1
Duzib248G0881 Durio zibethinus HOM05D000041 ORTHO05D000061 2.5e-09 64.3 39 82.1
Duzib052G1090 Durio zibethinus HOM05D000041 ORTHO05D000061 9.4e-09 62.4 39 79.5
PGR102G1780 Punica granatum HOM05D000041 ORTHO05D000061 1.6e-08 61.6 39 74.4
Eucgr.J00593 Eucalyptus grandis HOM05D000041 ORTHO05D000061 5.2e-07 56.6 39 66.7
PGR119G2284 Punica granatum HOM05D000041 ORTHO05D000061 1.1e-06 55.5 40 70.0
Atru.chr5.3083 Acer truncatum HOM05D000041 ORTHO05D000061 2.0e-06 54.7 39 66.7
Dinv23487 Davidia involucrata HOM05D000041 ORTHO05D000061 2.0e-06 54.7 39 61.5
Cfa005058 Carpinus fangiana HOM05D000041 ORTHO05D000061 3.3e-06 53.9 39 66.7
Haze_02325 Corylus avellana HOM05D000041 ORTHO05D000061 3.3e-06 53.9 39 66.7
Manes.04G086900 Manihot esculenta HOM05D000041 ORTHO05D000061 3.3e-06 53.9 39 66.7
CiPaw.05G069900 Carya illinoinensis HOM05D000041 ORTHO05D000061 5.7e-06 53.1 39 66.7
Cc02_g17220 Coffea canephora HOM05D000041 ORTHO05D000061 7.5e-06 52.8 39 64.1
MD05G1060800 Malus domestica HOM05D000041 ORTHO05D000061 7.5e-06 52.8 39 66.7
Sabra04G0106000 Salix brachista HOM05D000041 ORTHO05D010005 7.5e-06 52.8 39 61.5
Gohir.D13G030600 Gossypium hirsutum HOM05D000041 ORTHO05D000061 9.7e-06 52.4 39 69.2
Gorai.013G034800 Gossypium raimondii HOM05D000041 ORTHO05D000061 9.7e-06 52.4 39 69.2
Potri.004G158700 Populus trichocarpa HOM05D000041 ORTHO05D000061 9.7e-06 52.4 39 61.5


User provided reference genes

Program Settings