Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 6.1e-179 630.9 375 100.0
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 1.6e-86 323.9 376 60.1
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 2.5e-84 316.6 379 57.0
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 3.3e-84 316.2 374 58.8
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 4.3e-84 315.8 374 58.6
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 9.6e-84 314.7 377 58.4
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 1.4e-82 310.8 377 57.8
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 4.0e-82 309.3 375 54.7
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 9.0e-82 308.1 376 58.2
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 9.0e-82 308.1 379 57.3
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 1.5e-81 307.4 376 60.4
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 7.6e-81 305.1 391 56.3
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 6.5e-80 302.0 371 58.5
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 8.4e-80 301.6 380 57.1
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 4.2e-79 299.3 375 56.8
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 1.6e-78 297.4 376 57.7
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 2.7e-78 296.6 388 60.1
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 7.9e-78 295.0 375 56.8
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.8e-77 293.9 380 55.8
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 6.7e-77 292.0 377 57.6
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 8.7e-77 291.6 379 53.6
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 1.9e-76 290.4 375 55.2
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 1.9e-76 290.4 373 57.6
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 5.7e-76 288.9 376 57.4
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 5.7e-76 288.9 378 56.1
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 7.4e-76 288.5 379 54.9
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 9.6e-76 288.1 375 56.3
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 1.3e-75 287.7 381 51.4
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 1.3e-75 287.7 378 57.7
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 1.3e-75 287.7 417 53.0
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 3.7e-75 286.2 387 55.0
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 6.2e-75 285.4 389 54.5
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.1e-74 284.6 376 56.6
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 1.4e-74 284.3 381 54.6
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 3.1e-74 283.1 381 57.2
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 2.6e-73 280.0 375 56.3
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 2.6e-73 280.0 375 56.3
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 3.4e-73 279.6 388 53.6
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 7.6e-73 278.5 372 55.1
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 3.8e-72 276.2 392 51.8
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 1.9e-71 273.9 379 56.2
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 3.2e-71 273.1 375 54.9
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 5.5e-71 272.3 371 59.0
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.2e-70 271.2 372 54.8
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 1.6e-70 270.8 379 51.5
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.7e-70 270.0 380 52.6
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 6.1e-70 268.9 381 51.7
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 2.3e-69 266.9 379 57.0
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 3.0e-69 266.5 384 53.1
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 5.1e-69 265.8 380 52.4
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 1.5e-68 264.2 381 52.5
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 5.7e-68 262.3 380 56.1
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 5.7e-68 262.3 378 57.7
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 7.4e-68 261.9 388 56.4
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 7.4e-68 261.9 375 53.3
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 1.3e-67 261.2 373 48.8
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 8.2e-67 258.5 381 53.0
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 3.1e-66 256.5 382 55.8
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 9.0e-66 255.0 379 52.8
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 2.6e-65 253.4 380 52.1
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 4.5e-65 252.7 379 52.0
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 3.8e-64 249.6 378 45.0
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 1.4e-63 247.7 375 49.1
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 1.9e-63 247.3 350 55.1
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 3.2e-63 246.5 378 50.8
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 4.2e-63 246.1 379 50.9
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 5.5e-63 245.7 377 53.3
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 2.1e-62 243.8 376 48.9
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 4.6e-62 242.7 383 46.0
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 1.4e-61 241.1 373 50.1
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 1.2e-54 218.0 375 43.7
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 1.8e-53 214.2 375 47.5
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 3.7e-51 206.5 379 43.0
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 8.2e-51 205.3 375 48.5
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 3.1e-50 203.4 375 43.7
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 5.3e-50 202.6 428 41.6
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 7.0e-50 202.2 314 57.0
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 7.7e-49 198.7 295 54.6
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 1.5e-36 157.9 171 57.3
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 2.0e-36 157.5 179 54.2
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 1.8e-34 151.0 214 50.0
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 9.1e-34 148.7 174 56.9
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 1.6e-33 147.9 165 57.0
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 5.9e-33 146.0 344 45.1
Actinidia21200 Actinidia chinensis HOM05D004910 ORTHO05D006864 2.2e-32 144.1 171 53.2
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 1.1e-26 125.2 143 55.9
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 1.0e-24 118.6 416 35.3
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 1.9e-23 114.4 250 48.4
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 1.6e-22 111.3 379 39.6
Os04g0218701 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 4.7e-22 109.8 364 40.4
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 6.1e-22 109.4 403 35.0
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 6.1e-22 109.4 182 46.2
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.0e-17 94.4 132 47.7
vmacro13595 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 8.6e-08 62.4 79 70.9


User provided reference genes

Program Settings