Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 0.0e+00 1302.7 653 100.0
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 1.9e-268 929.1 695 70.6
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 5.5e-260 901.0 695 67.8
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 2.1e-259 899.0 666 70.3
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 1.0e-258 896.7 664 70.8
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 1.0e-258 896.7 664 70.8
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 2.3e-258 895.6 692 67.2
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 1.1e-257 893.3 668 70.2
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 4.3e-257 891.3 657 70.3
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.8e-255 885.9 675 69.3
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 3.1e-255 885.2 674 69.1
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 3.1e-255 885.2 667 69.1
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 6.9e-255 884.0 697 67.3
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 3.8e-253 878.2 674 68.1
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 1.4e-250 869.8 674 66.9
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.8e-250 869.4 671 68.6
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 1.9e-249 865.9 713 65.5
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 7.4e-249 864.0 671 67.8
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 1.7e-248 862.8 672 66.1
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 1.8e-247 859.4 708 65.1
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 4.1e-247 858.2 687 66.2
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 6.9e-247 857.4 690 64.6
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 5.9e-246 854.4 665 66.8
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 1.0e-245 853.6 673 66.3
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 5.0e-245 851.3 669 65.6
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.1e-244 850.1 687 64.6
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 1.1e-244 850.1 674 66.8
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 1.1e-244 850.1 705 63.8
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 1.4e-244 849.7 665 66.5
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 5.5e-244 847.8 665 66.5
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 4.7e-243 844.7 687 65.1
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 4.7e-243 844.7 669 66.1
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 6.1e-243 844.3 697 64.6
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 7.9e-243 844.0 672 64.6
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 7.9e-243 844.0 667 66.3
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 1.4e-242 843.2 692 65.9
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 3.0e-242 842.0 674 65.0
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 6.7e-242 840.9 686 65.9
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 1.5e-241 839.7 706 64.0
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 1.5e-241 839.7 669 63.8
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 2.6e-241 839.0 698 63.8
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 4.4e-241 838.2 670 65.2
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 4.4e-241 838.2 675 64.4
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 4.4e-241 838.2 660 67.1
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 5.7e-241 837.8 664 66.7
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 9.7e-241 837.0 711 62.2
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 1.3e-240 836.6 668 65.9
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.7e-240 836.3 699 64.1
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.7e-240 836.3 724 62.7
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 2.2e-240 835.9 669 65.8
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 4.8e-240 834.7 710 63.4
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 4.8e-240 834.7 696 64.8
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.8e-240 834.7 672 64.9
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 6.3e-240 834.3 672 65.0
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 1.4e-239 833.2 674 65.6
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 2.4e-239 832.4 671 63.6
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 4.1e-239 831.6 708 63.7
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 5.3e-239 831.2 708 63.7
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 2.0e-238 829.3 709 63.0
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 5.9e-238 827.8 685 64.1
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 5.9e-238 827.8 670 65.2
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 1.0e-237 827.0 660 66.1
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.4e-236 823.2 688 63.1
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.9e-236 822.8 663 64.4
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 2.5e-236 822.4 705 64.0
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 2.5e-236 822.4 706 62.0
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 5.5e-236 821.2 697 62.4
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 7.2e-236 820.8 659 65.7
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 1.2e-235 820.1 667 64.9
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 6.1e-235 817.8 687 64.2
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 1.0e-234 817.0 672 63.2
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 2.0e-233 812.8 668 64.8
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 1.1e-231 807.0 671 63.9
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 9.1e-231 803.9 704 61.8
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 9.1e-231 803.9 675 64.1
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 1.2e-230 803.5 595 68.9
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 2.6e-230 802.4 737 59.6
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 9.4e-228 793.9 647 63.8
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 8.2e-224 780.8 671 61.5
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 1.8e-223 779.6 622 66.9
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.9e-220 769.6 602 67.4
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.7e-219 765.8 655 62.4
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 1.6e-211 740.0 622 63.5
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.2e-206 723.8 694 58.5
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 2.7e-206 722.6 618 61.8
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 6.1e-203 711.4 572 65.6
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 8.0e-203 711.1 584 64.9
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 5.6e-196 688.3 625 58.6
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 5.4e-191 671.8 549 63.4
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 9.2e-191 671.0 582 60.3
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 2.3e-173 613.2 685 50.1
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 3.1e-170 602.8 599 53.9
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 7.6e-169 598.2 627 53.1
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 2.1e-166 590.1 1280 34.2
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 4.6e-166 589.0 665 49.0
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 4.2e-159 565.8 401 71.1
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 6.9e-146 521.9 402 63.4
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.1e-143 514.6 426 65.0
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 5.7e-132 475.7 419 62.1
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 2.2e-123 447.2 474 50.0
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 4.8e-123 446.0 333 67.0
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 2.2e-120 437.2 711 40.2
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 1.2e-118 431.4 605 42.6
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 2.3e-101 374.0 274 67.9
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.5e-100 371.3 225 82.7
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 6.4e-83 312.8 399 48.4
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 1.1e-79 302.0 204 76.0
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.6e-76 290.8 204 72.5
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.3e-75 288.5 309 57.6
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 6.6e-72 276.2 274 57.7
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.2e-67 261.2 579 34.9
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 2.1e-65 254.6 229 62.4
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 4.0e-61 240.4 238 57.1
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.7e-56 224.9 156 73.7
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.2e-52 212.2 157 68.2
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 8.1e-38 162.9 205 49.8
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 4.6e-33 147.1 101 70.3
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 1.8e-24 118.6 99 61.6
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 6.7e-24 116.7 126 51.6
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 9.7e-23 112.8 90 62.2
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.1e-21 107.8 126 43.7
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 3.8e-19 100.9 142 43.7
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 1.2e-17 95.9 81 63.0
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 4.8e-14 84.0 68 60.3


User provided reference genes

Program Settings