Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0943 Ceratophyllum demersum HOM05D000281 ORTHO05D028697 1.3e-108 396.4 198 100.0
CDE12G0070 Ceratophyllum demersum HOM05D000281 ORTHO05D028697 3.9e-36 155.6 207 51.7
CDE12G0975 Ceratophyllum demersum HOM05D000281 ORTHO05D028697 1.2e-24 117.5 61 96.7
CSS0001961 Camellia sinensis var. sinensis HOM05D000281 ORTHO05D000290 2.7e-08 63.2 66 47.0
COL.COLO4_14146 Corchorus olitorius HOM05D000281 ORTHO05D000290 5.9e-08 62.0 65 50.8
CSS0026905 Camellia sinensis var. sinensis HOM05D000281 ORTHO05D000290 7.7e-08 61.6 66 45.5
CSS0032475 Camellia sinensis var. sinensis HOM05D000281 ORTHO05D000290 7.7e-08 61.6 66 45.5
QL09p019191 Quercus lobata HOM05D000281 ORTHO05D000290 7.7e-08 61.6 65 47.7
QL09p019199 Quercus lobata HOM05D000281 ORTHO05D000290 7.7e-08 61.6 65 47.7
Gohir.D12G222600 Gossypium hirsutum HOM05D000281 ORTHO05D000290 1.3e-07 60.8 66 47.0
Gorai.008G238600 Gossypium raimondii HOM05D000281 ORTHO05D000290 1.3e-07 60.8 66 47.0
Prupe.2G279900 Prunus persica HOM05D000281 ORTHO05D000290 1.3e-07 60.8 65 47.7
FAN03G2116 Fragaria x ananassa HOM05D000281 ORTHO05D000290 1.7e-07 60.5 66 48.5
Gohir.A12G220300 Gossypium hirsutum HOM05D000281 ORTHO05D000290 1.7e-07 60.5 66 47.0
Duzib084G1124 Durio zibethinus HOM05D000281 ORTHO05D000290 2.3e-07 60.1 66 45.5
MD00G1105000 Malus domestica HOM05D000281 ORTHO05D000290 2.3e-07 60.1 65 47.7
Cfa008212 Carpinus fangiana HOM05D000281 ORTHO05D000290 2.9e-07 59.7 65 46.2
Haze_13846 Corylus avellana HOM05D000281 ORTHO05D000290 2.9e-07 59.7 65 46.2
Duzib205G1502 Durio zibethinus HOM05D000281 ORTHO05D000290 2.9e-07 59.7 66 47.0
CiPaw.03G095500 Carya illinoinensis HOM05D000281 ORTHO05D000290 3.8e-07 59.3 65 44.6
FvH4_7g27850 Fragaria vesca HOM05D000281 ORTHO05D000290 3.8e-07 59.3 66 48.5
FAN06G2202 Fragaria x ananassa HOM05D000281 ORTHO05D000290 3.8e-07 59.3 66 48.5
FAN06G3115 Fragaria x ananassa HOM05D000281 ORTHO05D000290 3.8e-07 59.3 66 48.5
FAN10G1748 Fragaria x ananassa HOM05D000281 ORTHO05D000290 3.8e-07 59.3 66 48.5
Thecc.03G259100 Theobroma cacao HOM05D000281 ORTHO05D000290 3.8e-07 59.3 66 47.0
Dinv39095 Davidia involucrata HOM05D000281 ORTHO05D000290 5.0e-07 58.9 67 47.8
Duzib205G1815 Durio zibethinus HOM05D000281 ORTHO05D000290 5.0e-07 58.9 65 47.7
Ciclev10007113m.g Citrus clementina HOM05D000281 ORTHO05D000290 6.6e-07 58.5 64 45.3
Ciclev10022285m.g Citrus clementina HOM05D000281 ORTHO05D000290 8.6e-07 58.2 66 45.5
CiPaw.04G061300 Carya illinoinensis HOM05D000281 ORTHO05D000290 1.5e-06 57.4 65 44.6
Migut.A00865 Erythranthe guttata HOM05D000281 ORTHO05D000290 1.5e-06 57.4 71 40.8
RcHm_v2.0_Chr1g0374721 Rosa chinensis HOM05D000281 ORTHO05D000290 1.5e-06 57.4 66 47.0
Actinidia03078 Actinidia chinensis HOM05D000281 ORTHO05D000290 1.9e-06 57.0 65 44.6
Gohir.A03G057500 Gossypium hirsutum HOM05D000281 ORTHO05D000290 1.9e-06 57.0 65 46.2
SGA_v2.0_scaffold2G01184 Striga asiatica HOM05D000281 ORTHO05D000290 1.9e-06 57.0 70 41.4
Aqoxy7G00697 Aquilegia oxysepala HOM05D000281 ORTHO05D000290 2.5e-06 56.6 65 41.5
arahy.Tifrunner.gnm1.ann1.LTQN7Y Arachis hypogaea HOM05D000281 ORTHO05D000290 2.5e-06 56.6 118 32.2
CANSAT56G2470 Cannabis sativa HOM05D000281 ORTHO05D000290 2.5e-06 56.6 65 44.6
CDE04G3263 Ceratophyllum demersum HOM05D040307 ORTHO05D129591 2.5e-06 56.6 51 54.9
Lj8C40T5 Lonicera japonica HOM05D000281 ORTHO05D000290 2.5e-06 56.6 65 46.2
MD07G1255800 Malus domestica HOM05D000281 ORTHO05D000290 2.5e-06 56.6 65 46.2
Potri.003G113700 Populus trichocarpa HOM05D000281 ORTHO05D000290 2.5e-06 56.6 66 43.9
Prupe.5G076900 Prunus persica HOM05D000281 ORTHO05D000290 2.5e-06 56.6 66 47.0
QL12p014178 Quercus lobata HOM05D000281 ORTHO05D000290 2.5e-06 56.6 66 47.0
BcaC02g10428 Brassica carinata HOM05D000281 ORTHO05D013141 3.3e-06 56.2 66 43.9
CDE04G1439 Ceratophyllum demersum HOM05D040307 ORTHO05D000290 3.3e-06 56.2 49 57.1
CDE04G2369 Ceratophyllum demersum HOM05D000281 ORTHO05D000290 3.3e-06 56.2 51 52.9
PGR042G3648 Punica granatum HOM05D000281 ORTHO05D000290 3.3e-06 56.2 66 47.0
Eucgr.E00464 Eucalyptus grandis HOM05D000281 ORTHO05D000290 4.3e-06 55.8 72 43.1
Oeu019817.1 Olea europaea HOM05D000281 ORTHO05D000290 4.3e-06 55.8 71 42.3
Sabra15G0142000 Salix brachista HOM05D000281 ORTHO05D000290 4.3e-06 55.8 62 41.9
Atru.chr1.679 Acer truncatum HOM05D000281 ORTHO05D000290 5.6e-06 55.5 65 44.6
Actinidia14452 Actinidia chinensis HOM05D000281 ORTHO05D000290 5.6e-06 55.5 66 43.9
Aa31LG4G16200 Aethionema arabicum HOM05D000281 ORTHO05D000290 5.6e-06 55.5 63 46.0
AT5G62350 Arabidopsis thaliana HOM05D000281 ORTHO05D000290 5.6e-06 55.5 66 45.5
Ciclev10005968m.g Citrus clementina HOM05D000281 ORTHO05D000290 5.6e-06 55.5 65 44.6
COL.COLO4_23896 Corchorus olitorius HOM05D000281 ORTHO05D000290 5.6e-06 55.5 67 44.8
Haze_08590 Corylus avellana HOM05D000281 ORTHO05D000290 5.6e-06 55.5 66 43.9
Thecc.03G158200 Theobroma cacao HOM05D000281 ORTHO05D000290 5.6e-06 55.5 65 44.6
CDE12G0178 Ceratophyllum demersum HOM05D000796 ORTHO05D000674 7.3e-06 55.1 48 56.2
Duzib068G0333 Durio zibethinus HOM05D000281 ORTHO05D000290 7.3e-06 55.1 65 44.6
FAN13G1439 Fragaria x ananassa HOM05D000281 ORTHO05D000290 7.3e-06 55.1 66 45.5
Gohir.D07G016400 Gossypium hirsutum HOM05D000281 ORTHO05D007047 7.3e-06 55.1 66 48.5
Gorai.003G114800 Gossypium raimondii HOM05D000281 ORTHO05D000290 7.3e-06 55.1 64 45.3
Nn6g34071 Nelumbo nucifera HOM05D000281 ORTHO05D000290 7.3e-06 55.1 67 44.8
CARHR156000 Cardamine hirsuta HOM05D000281 ORTHO05D000290 9.5e-06 54.7 66 45.5
Gohir.D03G108500 Gossypium hirsutum HOM05D000281 ORTHO05D000290 9.5e-06 54.7 64 45.3
Gorai.001G017200 Gossypium raimondii HOM05D000281 ORTHO05D007047 9.5e-06 54.7 66 48.5
PGR142G2434 Punica granatum HOM05D000281 ORTHO05D000290 9.5e-06 54.7 65 40.0
Sed0006522 Sechium edule HOM05D000281 ORTHO05D000290 9.5e-06 54.7 70 37.1


User provided reference genes

Program Settings