Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0905 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 2.3e-210 735.3 370 100.0
CDE04G1956 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 1.5e-116 423.7 229 90.4
TAR375G0732 Trochodendron aralioides HOM05D005840 ORTHO05D007144 1.4e-74 284.3 220 64.5
PSO063G5360 Papaver somniferum HOM05D005840 ORTHO05D007144 2.3e-74 283.5 215 67.0
PSO782G2283 Papaver somniferum HOM05D005840 ORTHO05D007144 4.0e-74 282.7 205 68.8
Nn3g18788 Nelumbo nucifera HOM05D005840 ORTHO05D007144 1.1e-71 274.6 210 66.7
Potri.015G002500 Populus trichocarpa HOM05D005840 ORTHO05D007144 1.9e-71 273.9 209 65.6
Sabra15G0001600 Salix brachista HOM05D005840 ORTHO05D007144 1.9e-71 273.9 209 65.1
MBI12_g45814_MAGBIO Magnolia biondii HOM05D005840 ORTHO05D007144 1.2e-70 271.2 230 61.3
ClCG01G000060 Citrullus lanatus HOM05D005840 ORTHO05D007144 4.6e-70 269.2 204 67.2
Migut.F00150 Erythranthe guttata HOM05D005840 ORTHO05D007144 6.0e-70 268.9 265 55.8
Lj3P895T18 Lonicera japonica HOM05D005840 ORTHO05D007144 1.7e-69 267.3 204 66.2
THA.LOC104798983 Tarenaya hassleriana HOM05D005840 ORTHO05D007144 2.3e-69 266.9 222 61.3
Gohir.D11G016500 Gossypium hirsutum HOM05D005840 ORTHO05D007144 3.9e-69 266.2 278 52.9
Gohir.A11G016700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 8.6e-69 265.0 275 53.8
Gorai.007G017300 Gossypium raimondii HOM05D005840 ORTHO05D007144 8.6e-69 265.0 278 52.9
Ah.13g070770 Amaranthus hybridus HOM05D005840 ORTHO05D007144 1.5e-68 264.2 244 58.2
Actinidia34271 Actinidia chinensis HOM05D005840 ORTHO05D007144 1.9e-68 263.8 203 64.0
Thhalv10005309m.g Eutrema salsugineum HOM05D005840 ORTHO05D007144 1.9e-68 263.8 208 61.1
Sp2g22870 Schrenkiella parvula HOM05D005840 ORTHO05D007144 1.9e-68 263.8 204 63.7
Atru.chr12.2435 Acer truncatum HOM05D005840 ORTHO05D007144 2.5e-68 263.5 198 67.2
Cpa.g.sc3.150 Carica papaya HOM05D005840 ORTHO05D007144 2.5e-68 263.5 211 60.7
Thecc.03G209000 Theobroma cacao HOM05D005840 ORTHO05D007144 2.5e-68 263.5 220 61.8
AL6G36040 Arabidopsis lyrata HOM05D005840 ORTHO05D007144 3.3e-68 263.1 219 61.2
CANSAT21G1965 Cannabis sativa HOM05D005840 ORTHO05D007144 3.3e-68 263.1 202 63.4
Carub.0006s2229 Capsella rubella HOM05D005840 ORTHO05D007144 3.3e-68 263.1 218 61.9
Dinv35383 Davidia involucrata HOM05D005840 ORTHO05D007144 3.3e-68 263.1 297 50.8
AT5G24460 Arabidopsis thaliana HOM05D005840 ORTHO05D007144 4.3e-68 262.7 211 61.1
HanXRQChr10g0305331 Helianthus annuus HOM05D005840 ORTHO05D007144 4.3e-68 262.7 266 53.8
Manes.01G043400 Manihot esculenta HOM05D005840 ORTHO05D007144 4.3e-68 262.7 205 64.4
Hma1.2p1_0094F.1_g047400 Hydrangea macrophylla HOM05D005840 ORTHO05D007144 5.6e-68 262.3 207 64.7
BcaC04g23543 Brassica carinata HOM05D005840 ORTHO05D007144 1.2e-67 261.2 205 62.4
C09p07230 Brassica napus HOM05D005840 ORTHO05D007144 1.2e-67 261.2 205 62.4
BolC9t53635H Brassica oleracea HOM05D005840 ORTHO05D007144 1.2e-67 261.2 205 62.0
QL09p007163 Quercus lobata HOM05D005840 ORTHO05D007144 1.2e-67 261.2 233 57.5
Sed0003210 Sechium edule HOM05D005840 ORTHO05D007144 1.2e-67 261.2 258 54.3
CSS0020402 Camellia sinensis var. sinensis HOM05D005840 ORTHO05D007144 1.6e-67 260.8 260 53.8
CiPaw.06G041000 Carya illinoinensis HOM05D005840 ORTHO05D007144 2.1e-67 260.4 210 61.0
PGR042G3207 Punica granatum HOM05D005840 ORTHO05D007144 2.1e-67 260.4 221 61.1
Aa31LG11G3710 Aethionema arabicum HOM05D005840 ORTHO05D007144 4.7e-67 259.2 238 55.5
MSTRG.26975 Avicennia marina HOM05D005840 ORTHO05D007144 4.7e-67 259.2 219 61.2
Rhsim03G0215700 Rhododendron simsii HOM05D005840 ORTHO05D007144 6.2e-67 258.8 206 62.6
Ciclev10021557m.g Citrus clementina HOM05D005840 ORTHO05D007144 1.1e-66 258.1 220 60.5
Duzib084G0063 Durio zibethinus HOM05D005840 ORTHO05D007144 1.1e-66 258.1 197 68.0
A09p06480 Brassica napus HOM05D005840 ORTHO05D007144 1.4e-66 257.7 207 62.3
Oeu055391.1 Olea europaea HOM05D005840 ORTHO05D007144 1.4e-66 257.7 228 59.2
CARHR188950 Cardamine hirsuta HOM05D005840 ORTHO05D007144 1.8e-66 257.3 209 60.8
Lsat_1_v5_gn_9_49980 Lactuca sativa HOM05D005840 ORTHO05D007144 2.3e-66 256.9 259 52.9
SalBow6G2506 Salvia bowleyana HOM05D005840 ORTHO05D007144 5.2e-66 255.8 218 61.5
BraA09t36291Z Brassica rapa HOM05D005840 ORTHO05D007144 8.9e-66 255.0 205 62.4
Oeu023690.1 Olea europaea HOM05D005840 ORTHO05D007144 8.9e-66 255.0 214 61.2
Nitab4.5_0000319g0020 Nicotiana tabacum HOM05D005840 ORTHO05D007144 1.5e-65 254.2 243 56.4
Phvul.009G044800 Phaseolus vulgaris HOM05D005840 ORTHO05D007144 1.5e-65 254.2 255 53.3
Cc02_g00800 Coffea canephora HOM05D005840 ORTHO05D007144 2.0e-65 253.8 201 63.2
Peaxi162Scf00912g10012 Petunia axillaris HOM05D005840 ORTHO05D007144 2.0e-65 253.8 214 59.3
Prupe.2G319100 Prunus persica HOM05D005840 ORTHO05D007144 2.0e-65 253.8 260 52.7
COL.COLO4_14373 Corchorus olitorius HOM05D005840 ORTHO05D007144 3.4e-65 253.1 203 61.6
SGA_v2.0_scaffold18G08468 Striga asiatica HOM05D005840 ORTHO05D007144 3.4e-65 253.1 222 59.0
TWI14G0550 Tripterygium wilfordii HOM05D005840 ORTHO05D007144 3.4e-65 253.1 204 64.2
Solyc03g081220.1 Solanum lycopersicum HOM05D005840 ORTHO05D007144 5.8e-65 252.3 208 59.6
TPR.G33360 Trifolium pratense HOM05D005840 ORTHO05D007144 7.6e-65 251.9 252 54.4
MSTRG.8611 Avicennia marina HOM05D005840 ORTHO05D007144 9.9e-65 251.5 230 57.8
Haze_00300 Corylus avellana HOM05D005840 ORTHO05D007144 9.9e-65 251.5 204 60.8
CsaV3_5G000100 Cucumis sativus L. HOM05D005840 ORTHO05D007144 1.3e-64 251.1 258 53.1
Nitab4.5_0010809g0010 Nicotiana tabacum HOM05D005840 ORTHO05D007144 1.7e-64 250.8 243 56.0
Psat5g071840 Pisum sativum HOM05D005840 ORTHO05D007144 1.7e-64 250.8 266 51.9
PGSC0003DMG400000562 Solanum tuberosum HOM05D005840 ORTHO05D007144 1.7e-64 250.8 208 59.1
Gohir.A08G104700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 2.2e-64 250.4 212 60.8
Sopen03g021950 Solanum pennellii HOM05D005840 ORTHO05D007144 2.2e-64 250.4 208 59.1
VMungo1309G2416 Vigna mungo HOM05D005840 ORTHO05D007144 2.2e-64 250.4 255 51.8
CAN.G303.23 Capsicum annuum HOM05D005840 ORTHO05D007144 2.9e-64 250.0 206 58.7
FAN10G3655 Fragaria x ananassa HOM05D005840 ORTHO05D007144 4.9e-64 249.2 251 54.6
Gorai.004G125300 Gossypium raimondii HOM05D005840 ORTHO05D007144 4.9e-64 249.2 212 60.8
Aqoxy6G02459 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 8.4e-64 248.4 222 61.7
Aqoxy6G02489 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 8.4e-64 248.4 222 61.7
AUR62005991 Chenopodium quinoa HOM05D005840 ORTHO05D007144 1.1e-63 248.1 209 60.8
AUR62028079 Chenopodium quinoa HOM05D005840 ORTHO05D007144 1.1e-63 248.1 210 60.0
MELO3C005919.2 Cucumis melo HOM05D005840 ORTHO05D007144 1.1e-63 248.1 267 51.3
Lsat_1_v5_gn_2_135020 Lactuca sativa HOM05D005840 ORTHO05D007144 1.1e-63 248.1 238 55.9
BcaNung01236 Brassica carinata HOM05D005840 ORTHO05D007144 1.4e-63 247.7 205 58.0
A06p35290 Brassica napus HOM05D005840 ORTHO05D007144 1.4e-63 247.7 204 59.8
EL10Ac3g05171 Beta vulgaris HOM05D005840 ORTHO05D007144 1.9e-63 247.3 211 61.1
Medtr3g092810 Medicago truncatula HOM05D005840 ORTHO05D007144 1.9e-63 247.3 263 52.1
Ca_16781_v3 Cicer arietinum L. HOM05D005840 ORTHO05D007144 2.4e-63 246.9 251 52.6
FAN10G0422 Fragaria x ananassa HOM05D005840 ORTHO05D007144 4.1e-63 246.1 254 53.1
Lalb_Chr23g0271941 Lupinus albus HOM05D005840 ORTHO05D007144 4.1e-63 246.1 271 52.0
MD07G1299300 Malus domestica HOM05D005840 ORTHO05D007144 5.4e-63 245.7 203 60.6
BcaB04g19821 Brassica carinata HOM05D005840 ORTHO05D007144 7.1e-63 245.4 202 58.9
C07p43220 Brassica napus HOM05D005840 ORTHO05D007144 7.1e-63 245.4 202 58.9
Lalb_Chr08g0239571 Lupinus albus HOM05D005840 ORTHO05D007144 7.1e-63 245.4 267 51.3
DCAR_008987 Daucus carota HOM05D005840 ORTHO05D007144 9.2e-63 245.0 216 57.9
FvH4_7g32940 Fragaria vesca HOM05D005840 ORTHO05D007144 9.2e-63 245.0 244 54.1
BraA06t26455Z Brassica rapa HOM05D005840 ORTHO05D007144 1.6e-62 244.2 218 57.8
Glyma.04G228100 Glycine max HOM05D005840 ORTHO05D007144 1.6e-62 244.2 213 57.7
MD01G1228500 Malus domestica HOM05D005840 ORTHO05D007144 1.6e-62 244.2 202 60.4
RcHm_v2.0_Chr1g0382901 Rosa chinensis HOM05D005840 ORTHO05D007144 1.6e-62 244.2 266 50.0
Glyma.06G136800 Glycine max HOM05D005840 ORTHO05D007144 2.1e-62 243.8 211 57.3
Lj1g0001826 Lotus japonicus HOM05D005840 ORTHO05D007144 2.7e-62 243.4 262 51.1
FAN03G2485 Fragaria x ananassa HOM05D005840 ORTHO05D007144 7.8e-62 241.9 237 54.9
Sc19g0000580 Simmondsia chinensis HOM05D005840 ORTHO05D007144 2.3e-61 240.4 210 59.0
unitig_37.g11995 Utricularia gibba HOM05D005840 ORTHO05D007144 3.0e-61 240.0 213 56.3
ECA232G4892 Erigeron canadensis HOM05D005840 ORTHO05D007144 1.5e-60 237.7 207 59.9
Sed0025728 Sechium edule HOM05D005840 ORTHO05D007144 1.2e-59 234.6 207 57.5
FAN01G0139 Fragaria x ananassa HOM05D005840 ORTHO05D007144 2.8e-59 233.4 236 54.7
Actinidia08699 Actinidia chinensis HOM05D005840 ORTHO05D007144 2.4e-58 230.3 209 54.5
HPP92_022381 Vanilla planifolia HOM05D005840 ORTHO05D007144 2.2e-56 223.8 210 57.1
ATR0661G235 Amborella trichopoda HOM05D005840 ORTHO05D007144 3.8e-56 223.0 201 56.2
vmacro06444 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 4.9e-56 222.6 259 47.5
vmacro22785 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 6.4e-56 222.2 299 44.1
SEGI_38224 Sequoiadendron giganteum HOM05D005840 ORTHO05D007144 1.9e-55 220.7 271 46.5
unitig_0.g2444 Utricularia gibba HOM05D005840 ORTHO05D007144 4.2e-55 219.5 201 56.7
unitig_92.g28240 Utricularia gibba HOM05D005840 ORTHO05D007144 2.1e-54 217.2 202 55.9
SHI02291 Sapria himalayana HOM05D005840 ORTHO05D007144 1.1e-50 204.9 202 53.0
Cc11_g13290 Coffea canephora HOM05D005840 ORTHO05D007144 1.0e-45 188.3 146 63.7
BcaB04g19819 Brassica carinata HOM05D005840 ORTHO05D007144 8.7e-45 185.3 181 55.8
Mapoly0031s0111 Marchantia polymorpha HOM05D005840 ORTHO05D007144 1.9e-44 184.1 208 48.6
COL.COLO4_12096 Corchorus olitorius HOM05D005840 ORTHO05D007144 1.1e-42 178.3 170 56.5
Pp3c3_29470 Physcomitrium patens HOM05D005840 ORTHO05D007144 4.0e-42 176.4 235 43.0
SMO140G0013 Selaginella moellendorffii HOM05D005840 ORTHO05D007144 9.0e-42 175.3 211 46.0
Os06g0712200 Oryza sativa ssp. japonica HOM05D005840 ORTHO05D007144 1.6e-38 164.5 230 44.8
COL.COLO4_35601 Corchorus olitorius HOM05D005840 ORTHO05D007144 2.7e-38 163.7 208 44.7
Zm00001eb272540 Zea mays HOM05D005840 ORTHO05D007144 2.7e-38 163.7 207 49.3
CBR_g20004 Chara braunii HOM05D005840 ORTHO05D007144 1.9e-36 157.5 168 50.6
BcaNung02020 Brassica carinata HOM05D005840 ORTHO05D007144 3.0e-29 133.7 189 43.4
BcaB04g19822 Brassica carinata HOM05D005840 ORTHO05D007144 2.8e-27 127.1 112 60.7
Duzib114G0266 Durio zibethinus HOM05D005840 ORTHO05D007144 1.1e-23 115.2 133 48.9
Gohir.D08G116401 Gossypium hirsutum HOM05D005840 ORTHO05D007144 1.6e-22 111.3 107 57.9
Cre01.g012300 Chlamydomonas reinhardtii HOM05D005840 ORTHO05D007144 4.1e-18 96.7 145 40.7
SalBow4G0698 Salvia bowleyana HOM05D001856 ORTHO05D007144 4.5e-17 93.2 60 63.3
MCO06G087 Micromonas commoda HOM05D005840 ORTHO05D007144 4.2e-15 86.7 206 33.5
SalBow6G2140 Salvia bowleyana HOM05D005840 ORTHO05D007144 1.2e-14 85.1 50 68.0
CAN.G2.4 Capsicum annuum HOM05D005840 ORTHO05D007144 2.5e-12 77.4 78 50.0
Potri.010G149800 Populus trichocarpa HOM05D005840 ORTHO05D007144 7.4e-12 75.9 56 62.5
COL.COLO4_35602 Corchorus olitorius HOM05D005840 ORTHO05D007144 9.7e-12 75.5 105 40.0


User provided reference genes

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