Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0902 Ceratophyllum demersum HOM05D000797 ORTHO05D043918 6.7e-79 297.4 159 100.0
CDE01G0587 Ceratophyllum demersum HOM05D000797 ORTHO05D007935 9.2e-44 180.6 304 42.8
Nn6g35097 Nelumbo nucifera HOM05D000797 ORTHO05D007935 1.3e-18 97.1 109 50.5
MBI01_g41123_MAGBIO Magnolia biondii HOM05D000797 ORTHO05D007935 3.3e-17 92.4 94 54.3
COL.COLO4_08133 Corchorus olitorius HOM05D000797 ORTHO05D007935 5.6e-17 91.7 113 49.6
Duzib128G0990 Durio zibethinus HOM05D000797 ORTHO05D007935 9.6e-17 90.9 114 51.8
Thecc.10G094600 Theobroma cacao HOM05D000797 ORTHO05D007935 9.6e-17 90.9 115 51.3
Gorai.011G233300 Gossypium raimondii HOM05D000797 ORTHO05D007935 4.8e-16 88.6 114 50.0
Hund22305 Selenicereus undatus HOM05D000797 ORTHO05D007935 8.1e-16 87.8 111 48.6
Sc20g0001380 Simmondsia chinensis HOM05D000797 ORTHO05D007935 1.1e-15 87.4 91 53.8
Cc02_g10360 Coffea canephora HOM05D000797 ORTHO05D007935 2.4e-15 86.3 111 49.5
TAR623G0595 Trochodendron aralioides HOM05D000797 ORTHO05D007935 4.0e-15 85.5 122 47.5
Gohir.A10G199600 Gossypium hirsutum HOM05D000797 ORTHO05D007935 5.3e-15 85.1 114 48.2
Actinidia18563 Actinidia chinensis HOM05D000797 ORTHO05D007935 6.9e-15 84.7 95 49.5
Gohir.D10G207600 Gossypium hirsutum HOM05D000797 ORTHO05D007935 1.5e-14 83.6 114 49.1
TAR369G0417 Trochodendron aralioides HOM05D000797 ORTHO05D007935 1.5e-14 83.6 110 45.5
EL10Ac2g02656 Beta vulgaris HOM05D000797 ORTHO05D007935 2.0e-14 83.2 113 42.5
Atru.chr12.945 Acer truncatum HOM05D000797 ORTHO05D007935 2.6e-14 82.8 111 47.7
Cpa.g.sc128.57 Carica papaya HOM05D000797 ORTHO05D007935 2.6e-14 82.8 100 46.0
MSTRG.27515 Avicennia marina HOM05D000797 ORTHO05D007935 5.8e-14 81.6 94 48.9
Aqoxy116s002 Aquilegia oxysepala HOM05D000797 ORTHO05D007935 7.6e-14 81.3 117 43.6
Aqoxy1G00989 Aquilegia oxysepala HOM05D000797 ORTHO05D007935 7.6e-14 81.3 117 43.6
Migut.F00923 Erythranthe guttata HOM05D000797 ORTHO05D007935 9.9e-14 80.9 95 50.5
Cfa011204 Carpinus fangiana HOM05D000797 ORTHO05D007935 1.3e-13 80.5 105 47.6
Rhsim03G0110300 Rhododendron simsii HOM05D000797 ORTHO05D007935 1.3e-13 80.5 109 45.0
PSO063G3445 Papaver somniferum HOM05D000797 ORTHO05D007935 1.7e-13 80.1 129 42.6
PSO339G3040 Papaver somniferum HOM05D000797 ORTHO05D007935 1.7e-13 80.1 129 42.6
ClCG08G008000 Citrullus lanatus HOM05D000797 ORTHO05D007935 2.2e-13 79.7 107 45.8
SGA_v2.0_scaffold62G21356 Striga asiatica HOM05D000797 ORTHO05D007935 2.2e-13 79.7 109 45.0
ATR0820G060 Amborella trichopoda HOM05D000797 ORTHO05D007935 2.9e-13 79.3 101 48.5
Manes.10G054100 Manihot esculenta HOM05D000797 ORTHO05D007935 3.8e-13 79.0 116 42.2
AUR62037785 Chenopodium quinoa HOM05D000797 ORTHO05D007935 4.9e-13 78.6 90 52.2
Haze_02640 Corylus avellana HOM05D000797 ORTHO05D007935 4.9e-13 78.6 105 46.7
Nitab4.5_0003408g0130 Nicotiana tabacum HOM05D000797 ORTHO05D007935 4.9e-13 78.6 96 49.0
DCAR_006377 Daucus carota HOM05D000797 ORTHO05D007935 6.4e-13 78.2 113 46.9
Zm00001eb061570 Zea mays HOM05D000797 ORTHO05D007935 6.4e-13 78.2 91 53.8
Dinv31283 Davidia involucrata HOM05D000797 ORTHO05D007935 8.4e-13 77.8 97 48.5
MD07G1166600 Malus domestica HOM05D000797 ORTHO05D007935 8.4e-13 77.8 94 47.9
QL04p040516 Quercus lobata HOM05D000797 ORTHO05D007935 8.4e-13 77.8 102 51.0
Sopen11g003580 Solanum pennellii HOM05D000797 ORTHO05D007935 1.1e-12 77.4 96 47.9
Hma1.2p1_0361F.1_g136000 Hydrangea macrophylla HOM05D000797 ORTHO05D007935 1.4e-12 77.0 96 46.9
arahy.Tifrunner.gnm1.ann1.C4411R Arachis hypogaea HOM05D000797 ORTHO05D031529 1.9e-12 76.6 98 40.8
arahy.Tifrunner.gnm1.ann1.PI69HT Arachis hypogaea HOM05D000797 ORTHO05D007935 1.9e-12 76.6 94 42.6
CANSAT56G1402 Cannabis sativa HOM05D000797 ORTHO05D007935 1.9e-12 76.6 111 47.7
Solyc11g007720.2 Solanum lycopersicum HOM05D000797 ORTHO05D007935 1.9e-12 76.6 96 47.9
GSVIVG01034677001 Vitis vinifera HOM05D000797 ORTHO05D007935 1.9e-12 76.6 113 43.4
arahy.Tifrunner.gnm1.ann1.G31VK2 Arachis hypogaea HOM05D000797 ORTHO05D031529 2.4e-12 76.3 98 41.8
Sabra08G0018700 Salix brachista HOM05D000797 ORTHO05D007935 2.4e-12 76.3 99 51.5
arahy.Tifrunner.gnm1.ann1.4X1WS6 Arachis hypogaea HOM05D000797 ORTHO05D007935 3.2e-12 75.9 94 42.6
MELO3C019872.2 Cucumis melo HOM05D000797 ORTHO05D007935 3.2e-12 75.9 90 50.0
Nitab4.5_0000593g0070 Nicotiana tabacum HOM05D000797 ORTHO05D007935 3.2e-12 75.9 96 47.9
AUR62042228 Chenopodium quinoa HOM05D000797 ORTHO05D007935 4.2e-12 75.5 114 46.5
Lj3A934G29 Lonicera japonica HOM05D000797 ORTHO05D007935 4.2e-12 75.5 109 43.1
PGR044G1783 Punica granatum HOM05D000797 ORTHO05D007935 4.2e-12 75.5 94 46.8
Ciclev10030940m.g Citrus clementina HOM05D000797 ORTHO05D007935 5.4e-12 75.1 95 51.6
Potri.008G027400 Populus trichocarpa HOM05D000797 ORTHO05D007935 5.4e-12 75.1 103 49.5
CAN.G135.53 Capsicum annuum HOM05D000797 ORTHO05D007935 7.1e-12 74.7 99 46.5
Eucgr.J01028 Eucalyptus grandis HOM05D000797 ORTHO05D007935 7.1e-12 74.7 96 49.0
SalBow4G0837 Salvia bowleyana HOM05D000797 ORTHO05D007935 9.3e-12 74.3 115 43.5
HPP92_017899 Vanilla planifolia HOM05D000797 ORTHO05D007935 1.2e-11 73.9 109 45.0
Ah.05g167870 Amaranthus hybridus HOM05D000797 ORTHO05D007935 1.6e-11 73.6 118 44.1
arahy.Tifrunner.gnm1.ann1.6UA35R Arachis hypogaea HOM05D000797 ORTHO05D031529 1.6e-11 73.6 98 39.8
Peaxi162Scf00398g00717 Petunia axillaris HOM05D000797 ORTHO05D007935 1.6e-11 73.6 96 50.0
Prupe.2G204600 Prunus persica HOM05D000797 ORTHO05D007935 1.6e-11 73.6 94 50.0
BcaB02g08583 Brassica carinata HOM05D000797 ORTHO05D007935 2.1e-11 73.2 93 44.1
Ciclev10033754m.g Citrus clementina HOM05D000797 ORTHO05D007935 2.1e-11 73.2 96 45.8
CsaV3_2G032870 Cucumis sativus L. HOM05D000797 ORTHO05D007935 2.1e-11 73.2 90 50.0
HPP92_017904 Vanilla planifolia HOM05D000797 ORTHO05D007935 2.1e-11 73.2 109 45.0
A04p07150 Brassica napus HOM05D000797 ORTHO05D007935 2.7e-11 72.8 93 44.1
BraA04t16411Z Brassica rapa HOM05D000797 ORTHO05D007935 2.7e-11 72.8 93 44.1
Sed0000215 Sechium edule HOM05D000797 ORTHO05D007935 4.6e-11 72.0 90 48.9
BcaC02g09272 Brassica carinata HOM05D000797 ORTHO05D007935 6.0e-11 71.6 113 40.7
C04p40740 Brassica napus HOM05D000797 ORTHO05D007935 6.0e-11 71.6 113 40.7
BolC4t25657H Brassica oleracea HOM05D000797 ORTHO05D007935 6.0e-11 71.6 113 40.7
FAN01G0483 Fragaria x ananassa HOM05D000797 ORTHO05D007935 7.9e-11 71.2 110 42.7
FvH4_7g18300 Fragaria vesca HOM05D000797 ORTHO05D007935 1.0e-10 70.9 110 44.5
FAN06G0640 Fragaria x ananassa HOM05D000797 ORTHO05D007935 1.0e-10 70.9 110 44.5
FAN06G2988 Fragaria x ananassa HOM05D000797 ORTHO05D007935 1.0e-10 70.9 110 44.5
TWI63G0563 Tripterygium wilfordii HOM05D000797 ORTHO05D007935 1.0e-10 70.9 94 45.7
Duzib106G1442 Durio zibethinus HOM05D000797 ORTHO05D043918 1.3e-10 70.5 81 55.6
HanXRQChr05g0147541 Helianthus annuus HOM05D000797 ORTHO05D007935 1.3e-10 70.5 107 42.1
RcHm_v2.0_Chr1g0361921 Rosa chinensis HOM05D000797 ORTHO05D007935 1.3e-10 70.5 114 41.2
Aa31LG10G7300 Aethionema arabicum HOM05D000797 ORTHO05D007935 1.7e-10 70.1 114 38.6
FAN03G1164 Fragaria x ananassa HOM05D000797 ORTHO05D007935 1.7e-10 70.1 110 42.7
FAN10G1566 Fragaria x ananassa HOM05D000797 ORTHO05D007935 2.3e-10 69.7 111 44.1
FAN10G1800 Fragaria x ananassa HOM05D000797 ORTHO05D007935 2.3e-10 69.7 110 41.8
Lsat_1_v5_gn_0_10961 Lactuca sativa HOM05D000797 ORTHO05D007935 2.3e-10 69.7 99 43.4
Lj5g0021294 Lotus japonicus HOM05D000797 ORTHO05D007935 3.0e-10 69.3 101 40.6
MD01G1099700 Malus domestica HOM05D000797 ORTHO05D007935 5.1e-10 68.6 110 41.8
Medtr1g091037 Medicago truncatula HOM05D000797 ORTHO05D007935 5.1e-10 68.6 90 43.3
THA.LOC104823502 Tarenaya hassleriana HOM05D000797 ORTHO05D007935 6.6e-10 68.2 95 44.2
Thhalv10010192m.g Eutrema salsugineum HOM05D000797 ORTHO05D007935 1.1e-09 67.4 93 40.9
Lalb_Chr02g0151271 Lupinus albus HOM05D000797 ORTHO05D007935 1.5e-09 67.0 90 44.4
Glyma.20G189500 Glycine max HOM05D000797 ORTHO05D007935 2.5e-09 66.2 91 44.0
Glyma.10G201000 Glycine max HOM05D000797 ORTHO05D007935 4.3e-09 65.5 124 33.1
Lalb_Chr21g0313141 Lupinus albus HOM05D000797 ORTHO05D007935 4.3e-09 65.5 116 40.5
TPR.G2508 Trifolium pratense HOM05D000797 ORTHO05D007935 5.6e-09 65.1 90 41.1
VMungo0720G2230 Vigna mungo HOM05D000797 ORTHO05D007935 5.6e-09 65.1 98 40.8
CSS0023302 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D007935 7.3e-09 64.7 96 42.7
Sp5g10070 Schrenkiella parvula HOM05D000797 ORTHO05D007935 7.3e-09 64.7 113 38.1
Psat0ss6591g0080 Pisum sativum HOM05D000797 ORTHO05D007935 1.3e-08 63.9 112 39.3
CiPaw.13G035200 Carya illinoinensis HOM05D000797 ORTHO05D007935 1.6e-08 63.5 103 45.6
Os06g0499900 Oryza sativa ssp. japonica HOM05D000797 ORTHO05D007935 1.6e-08 63.5 91 47.3
CARHR161960 Cardamine hirsuta HOM05D000797 ORTHO05D007935 2.1e-08 63.2 117 39.3
Ca_10480_v3 Cicer arietinum L. HOM05D000797 ORTHO05D007935 2.8e-08 62.8 90 40.0
Phvul.007G106200 Phaseolus vulgaris HOM05D000797 ORTHO05D007935 8.1e-08 61.2 91 41.8
ECA232G1949 Erigeron canadensis HOM05D000797 ORTHO05D007935 4.0e-07 58.9 99 40.4
Carub.0005s1856 Capsella rubella HOM05D000797 ORTHO05D007935 1.5e-06 57.0 93 37.6
AT3G52200 Arabidopsis thaliana HOM05D000797 ORTHO05D007935 2.6e-06 56.2 93 38.7
vmacro07212 Vaccinium macrocarpon HOM05D000797 ORTHO05D007935 5.8e-06 55.1 38 71.1


User provided reference genes

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