Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0898 Ceratophyllum demersum HOM05D002790 ORTHO05D003033 1.3e-42 176.0 91 100.0
CDE04G0586 Ceratophyllum demersum HOM05D002790 ORTHO05D003033 1.9e-14 82.4 46 89.1
Glyma.04G027100 Glycine max HOM05D002790 ORTHO05D003033 9.4e-09 63.5 53 58.5
TAR381G1499 Trochodendron aralioides HOM05D002790 ORTHO05D003033 9.4e-09 63.5 54 57.4
TAR628G0961 Trochodendron aralioides HOM05D002790 ORTHO05D003033 9.4e-09 63.5 54 53.7
Nn8g39421 Nelumbo nucifera HOM05D002790 ORTHO05D003033 2.7e-08 62.0 54 51.9
Lj1g0014383 Lotus japonicus HOM05D002790 ORTHO05D003033 7.9e-08 60.5 54 51.9
Ciclev10024938m.g Citrus clementina HOM05D002790 ORTHO05D003033 1.0e-07 60.1 53 52.8
CSS0020058 Camellia sinensis var. sinensis HOM05D002790 ORTHO05D003033 1.4e-07 59.7 53 56.6
Lalb_Chr11g0062081 Lupinus albus HOM05D002790 ORTHO05D003033 1.4e-07 59.7 54 48.1
MBI05_g05430_MAGBIO Magnolia biondii HOM05D002790 ORTHO05D003033 1.4e-07 59.7 53 56.6
Phvul.009G014000 Phaseolus vulgaris HOM05D002790 ORTHO05D003033 1.4e-07 59.7 53 54.7
Lalb_Chr23g0266311 Lupinus albus HOM05D002790 ORTHO05D003033 1.8e-07 59.3 54 50.0
arahy.Tifrunner.gnm1.ann1.6PK8GH Arachis hypogaea HOM05D002790 ORTHO05D003033 2.3e-07 58.9 54 50.0
VMungo1309G1755 Vigna mungo HOM05D002790 ORTHO05D003033 2.3e-07 58.9 53 54.7
Duzib093G0905 Durio zibethinus HOM05D002790 ORTHO05D003033 3.0e-07 58.5 54 53.7
PSO210G2567 Papaver somniferum HOM05D002790 ORTHO05D003033 3.0e-07 58.5 53 54.7
PSO541G0723 Papaver somniferum HOM05D002790 ORTHO05D003033 3.0e-07 58.5 53 50.9
PSO675G9200 Papaver somniferum HOM05D002790 ORTHO05D003033 3.0e-07 58.5 53 50.9
TAR625G0910 Trochodendron aralioides HOM05D002790 ORTHO05D003033 3.0e-07 58.5 54 51.9
arahy.Tifrunner.gnm1.ann1.ZAY3TB Arachis hypogaea HOM05D002790 ORTHO05D003033 3.9e-07 58.2 54 50.0
Dinv33594 Davidia involucrata HOM05D002790 ORTHO05D003033 3.9e-07 58.2 53 56.6
PSO210G6806 Papaver somniferum HOM05D002790 ORTHO05D003033 3.9e-07 58.2 53 54.7
ATR0681G178 Amborella trichopoda HOM05D002790 ORTHO05D003033 5.1e-07 57.8 46 60.9
arahy.Tifrunner.gnm1.ann1.JCP29K Arachis hypogaea HOM05D002790 ORTHO05D003033 5.1e-07 57.8 54 48.1
arahy.Tifrunner.gnm1.ann1.NZLE3F Arachis hypogaea HOM05D002790 ORTHO05D003033 5.1e-07 57.8 54 48.1
Hund17214 Selenicereus undatus HOM05D002790 ORTHO05D003033 5.1e-07 57.8 45 62.2
Rhsim08G0036300 Rhododendron simsii HOM05D002790 ORTHO05D003033 6.7e-07 57.4 53 52.8
Duzib264G1123 Durio zibethinus HOM05D002790 ORTHO05D003033 8.8e-07 57.0 53 54.7
SalBow8G5479 Salvia bowleyana HOM05D002790 ORTHO05D003033 8.8e-07 57.0 53 52.8
Aqoxy6G02414 Aquilegia oxysepala HOM05D002790 ORTHO05D003033 1.1e-06 56.6 54 50.0
RcHm_v2.0_Chr6g0302071 Rosa chinensis HOM05D002790 ORTHO05D003033 1.1e-06 56.6 46 58.7
vmacro22101 Vaccinium macrocarpon HOM05D002790 ORTHO05D003033 1.1e-06 56.6 53 50.9
FvH4_2g38980 Fragaria vesca HOM05D002790 ORTHO05D003033 1.5e-06 56.2 46 60.9
Lsat_1_v5_gn_2_78280 Lactuca sativa HOM05D002790 ORTHO05D003033 1.5e-06 56.2 54 53.7
Lj4C213G3 Lonicera japonica HOM05D002790 ORTHO05D003033 1.5e-06 56.2 45 64.4
MD15G1019100 Malus domestica HOM05D002790 ORTHO05D003033 1.5e-06 56.2 46 58.7
MD15G1250100 Malus domestica HOM05D002790 ORTHO05D003033 1.5e-06 56.2 54 53.7
Solyc02g084620.3 Solanum lycopersicum HOM05D002790 ORTHO05D003033 1.5e-06 56.2 53 50.9
Sopen02g029290 Solanum pennellii HOM05D002790 ORTHO05D003033 1.5e-06 56.2 53 50.9
Thecc.01G024500 Theobroma cacao HOM05D002790 ORTHO05D003033 1.5e-06 56.2 54 51.9
Actinidia22497 Actinidia chinensis HOM05D002790 ORTHO05D003033 2.0e-06 55.8 54 48.1
MELO3C018687.2 Cucumis melo HOM05D002790 ORTHO05D003033 2.0e-06 55.8 54 48.1
CsaV3_7G006050 Cucumis sativus L. HOM05D002790 ORTHO05D003033 2.0e-06 55.8 54 48.1
Gohir.A11G178700 Gossypium hirsutum HOM05D002790 ORTHO05D003033 2.0e-06 55.8 53 54.7
Thecc.08G037000 Theobroma cacao HOM05D002790 ORTHO05D003033 2.0e-06 55.8 54 48.1
CAN.G358.10 Capsicum annuum HOM05D002790 ORTHO05D003033 2.6e-06 55.5 53 49.1
Cc07_g10320 Coffea canephora HOM05D002790 ORTHO05D003033 2.6e-06 55.5 53 52.8
Duzib116G0605 Durio zibethinus HOM05D002790 ORTHO05D003033 2.6e-06 55.5 54 51.9
Glyma.06G027100 Glycine max HOM05D002790 ORTHO05D003033 2.6e-06 55.5 49 53.1
Sed0020301 Sechium edule HOM05D002790 ORTHO05D003033 2.6e-06 55.5 54 48.1
EL10Ac1g00562 Beta vulgaris HOM05D002790 ORTHO05D003033 3.3e-06 55.1 63 46.0
CANSAT01G1241 Cannabis sativa HOM05D002790 ORTHO05D003033 3.3e-06 55.1 53 54.7
Duzib147G0927 Durio zibethinus HOM05D002790 ORTHO05D003033 3.3e-06 55.1 53 54.7
Actinidia15385 Actinidia chinensis HOM05D002790 ORTHO05D003033 4.4e-06 54.7 54 48.1
Aqoxy6G02819 Aquilegia oxysepala HOM05D002790 ORTHO05D003033 4.4e-06 54.7 54 50.0
Dinv31807 Davidia involucrata HOM05D002790 ORTHO05D003033 4.4e-06 54.7 53 50.9
Migut.H02489 Erythranthe guttata HOM05D002790 ORTHO05D003033 4.4e-06 54.7 53 50.9
FAN20G0808 Fragaria x ananassa HOM05D002790 ORTHO05D003033 4.4e-06 54.7 46 58.7
Gohir.D11G186300 Gossypium hirsutum HOM05D002790 ORTHO05D003033 4.4e-06 54.7 53 54.7
Gorai.007G198000 Gossypium raimondii HOM05D002790 ORTHO05D003033 4.4e-06 54.7 53 54.7
Oeu035322.1 Olea europaea HOM05D002790 ORTHO05D003033 4.4e-06 54.7 53 49.1
Prupe.1G371200 Prunus persica HOM05D002790 ORTHO05D003033 4.4e-06 54.7 54 51.9
Cfa006932 Carpinus fangiana HOM05D002790 ORTHO05D003033 5.7e-06 54.3 53 49.1
Medtr3g113050 Medicago truncatula HOM05D002790 ORTHO05D003033 5.7e-06 54.3 51 54.9
Sabra07G0014200 Salix brachista HOM05D002790 ORTHO05D003033 5.7e-06 54.3 53 50.9
Haze_03818 Corylus avellana HOM05D002790 ORTHO05D003033 7.4e-06 53.9 53 49.1
FAN15G2556 Fragaria x ananassa HOM05D002790 ORTHO05D003033 7.4e-06 53.9 46 58.7
TPR.G31200 Trifolium pratense HOM05D002790 ORTHO05D003033 7.4e-06 53.9 51 52.9
TWI09G1198 Tripterygium wilfordii HOM05D002790 ORTHO05D003033 7.4e-06 53.9 49 49.0
ClCG09G013610 Citrullus lanatus HOM05D002790 ORTHO05D003033 9.7e-06 53.5 54 46.3
Dinv39481 Davidia involucrata HOM05D002790 ORTHO05D003033 9.7e-06 53.5 54 48.1
Peaxi162Scf00083g01811 Petunia axillaris HOM05D002790 ORTHO05D003033 9.7e-06 53.5 53 45.3
Psat5g013920 Pisum sativum HOM05D002790 ORTHO05D003033 9.7e-06 53.5 58 46.6


User provided reference genes

Program Settings