Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.4e-142 509.6 254 100.0
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 5.1e-129 464.5 250 92.8
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 8.8e-97 357.5 242 74.0
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 7.4e-96 354.4 248 72.2
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 2.2e-95 352.8 244 72.5
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 2.2e-95 352.8 246 70.3
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 2.8e-95 352.4 248 71.4
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 2.8e-95 352.4 250 73.2
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 2.8e-95 352.4 243 73.3
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 4.8e-95 351.7 246 74.0
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 4.8e-95 351.7 247 72.1
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 8.2e-95 350.9 247 72.9
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 1.1e-94 350.5 249 71.5
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 1.1e-94 350.5 245 71.4
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 3.1e-94 349.0 247 69.6
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 3.1e-94 349.0 246 69.9
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 4.1e-94 348.6 252 69.8
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 4.1e-94 348.6 246 70.3
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 5.3e-94 348.2 245 71.4
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 5.3e-94 348.2 246 71.1
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 5.3e-94 348.2 249 71.9
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 6.9e-94 347.8 249 69.1
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 6.9e-94 347.8 246 70.3
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 6.9e-94 347.8 246 71.1
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 9.1e-94 347.4 245 72.7
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 1.5e-93 346.7 247 69.2
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 2.0e-93 346.3 247 71.7
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 2.0e-93 346.3 245 71.0
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.6e-93 345.9 246 69.5
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 3.4e-93 345.5 250 69.2
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 3.4e-93 345.5 246 69.1
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 3.4e-93 345.5 242 72.7
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 5.9e-93 344.7 250 71.2
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 5.9e-93 344.7 245 69.4
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 7.7e-93 344.4 246 71.1
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 1.0e-92 344.0 251 68.9
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 1.0e-92 344.0 245 69.8
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 1.0e-92 344.0 245 70.2
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 1.3e-92 343.6 245 71.0
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 1.3e-92 343.6 245 69.8
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 1.3e-92 343.6 250 67.6
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 2.2e-92 342.8 244 71.3
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 2.2e-92 342.8 246 70.3
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 3.8e-92 342.0 245 70.2
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 3.8e-92 342.0 253 68.4
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 3.8e-92 342.0 245 69.4
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 5.0e-92 341.7 250 69.2
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 5.0e-92 341.7 253 68.4
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 6.5e-92 341.3 244 69.3
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 6.5e-92 341.3 251 69.7
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 6.5e-92 341.3 253 66.8
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 6.5e-92 341.3 245 69.4
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 6.5e-92 341.3 245 70.2
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 8.5e-92 340.9 245 69.4
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 8.5e-92 340.9 252 67.1
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 1.1e-91 340.5 244 68.9
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 1.1e-91 340.5 248 68.1
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 1.9e-91 339.7 248 69.8
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 2.5e-91 339.3 250 68.4
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 3.2e-91 339.0 250 66.0
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 3.2e-91 339.0 252 69.4
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 5.5e-91 338.2 245 69.4
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 7.2e-91 337.8 245 69.8
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 1.2e-90 337.0 249 69.1
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 2.7e-90 335.9 256 68.4
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 2.7e-90 335.9 245 66.5
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 2.7e-90 335.9 246 69.1
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 3.6e-90 335.5 245 66.9
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 4.7e-90 335.1 247 67.6
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 4.7e-90 335.1 248 66.5
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 6.1e-90 334.7 243 69.1
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 6.1e-90 334.7 250 67.6
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 1.4e-89 333.6 255 67.8
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 1.4e-89 333.6 246 67.5
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 1.4e-89 333.6 249 68.3
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 2.3e-89 332.8 246 67.1
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 3.0e-89 332.4 244 69.7
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 3.0e-89 332.4 251 68.5
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 5.1e-89 331.6 245 66.1
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 5.1e-89 331.6 247 67.2
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 8.8e-89 330.9 245 66.9
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 1.1e-88 330.5 247 66.8
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 7.4e-88 327.8 249 67.5
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 7.4e-88 327.8 245 65.7
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 7.4e-88 327.8 249 67.1
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 1.3e-87 327.0 241 68.9
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 2.8e-87 325.9 245 64.9
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 2.8e-87 325.9 285 62.1
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 3.7e-87 325.5 245 64.9
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 3.7e-87 325.5 245 64.9
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 8.2e-87 324.3 243 68.3
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 2.4e-86 322.8 249 66.3
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 7.0e-86 321.2 248 61.7
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 1.2e-85 320.5 248 64.1
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 1.2e-85 320.5 248 64.1
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 1.3e-84 317.0 241 68.5
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 5.0e-84 315.1 245 62.9
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 5.0e-84 315.1 245 62.9
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 5.0e-84 315.1 245 62.9
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 5.5e-83 311.6 249 63.9
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 4.7e-82 308.5 254 62.6
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 4.7e-82 308.5 246 61.4
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 6.7e-81 304.7 246 61.4
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 1.0e-76 290.8 245 62.0
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 2.2e-76 289.7 216 65.3
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 7.5e-72 274.6 214 64.5
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 7.0e-70 268.1 248 59.3
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 4.2e-67 258.8 248 54.0
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 2.7e-66 256.1 247 54.3
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 6.3e-63 245.0 247 55.1
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 4.5e-61 238.8 188 63.3
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 3.8e-60 235.7 245 49.8
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 1.0e-57 227.6 241 52.7
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 2.0e-56 223.4 122 86.1
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 2.9e-55 219.5 255 49.0
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 1.4e-54 217.2 122 82.0
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 3.5e-53 212.6 256 49.6
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 4.3e-51 205.7 119 82.4
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 1.6e-50 203.8 185 53.5
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 3.6e-50 202.6 204 53.9
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 4.7e-50 202.2 161 61.5
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 4.9e-47 192.2 200 45.5
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 6.0e-45 185.3 238 43.7
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 8.6e-44 181.4 111 76.6
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 8.1e-42 174.9 134 69.4
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 7.1e-38 161.8 183 45.4
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 4.6e-37 159.1 89 83.1
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 1.3e-28 131.0 83 71.1
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 1.1e-25 121.3 76 72.4
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 3.4e-24 116.3 188 37.8
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 8.7e-20 101.7 61 82.0
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 2.9e-15 86.7 73 61.6
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 7.9e-13 78.6 99 43.4


User provided reference genes

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