Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 1.7e-134 482.6 233 100.0
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 4.3e-66 255.4 233 53.2
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 9.9e-63 244.2 225 53.3
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 7.4e-58 228.0 217 49.3
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 9.6e-58 227.6 220 50.5
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 2.8e-57 226.1 224 48.2
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.4e-56 223.8 221 49.8
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.8e-56 223.4 217 45.6
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 4.0e-56 222.2 225 46.7
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 1.2e-55 220.7 221 49.3
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 2.0e-55 219.9 222 50.0
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 2.6e-55 219.5 218 47.7
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 5.8e-55 218.4 221 48.0
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 6.4e-54 214.9 218 46.3
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 3.2e-53 212.6 226 47.8
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 5.5e-53 211.8 222 45.5
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 7.1e-53 211.5 221 46.6
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 7.1e-53 211.5 221 46.2
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 9.3e-53 211.1 219 47.0
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 9.3e-53 211.1 221 46.6
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 2.7e-52 209.5 221 46.2
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 4.6e-52 208.8 231 44.6
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 4.6e-52 208.8 224 44.2
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 6.0e-52 208.4 219 49.3
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 7.9e-52 208.0 216 46.3
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 1.3e-51 207.2 232 45.3
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 3.0e-51 206.1 227 47.6
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 3.9e-51 205.7 232 42.7
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.9e-51 205.7 227 47.1
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 3.9e-51 205.7 222 44.6
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 5.1e-51 205.3 220 48.2
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 5.1e-51 205.3 224 46.0
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 6.7e-51 204.9 219 49.3
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 8.7e-51 204.5 219 48.9
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 8.7e-51 204.5 220 48.2
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.1e-50 204.1 229 46.7
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 3.3e-50 202.6 220 45.9
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 3.3e-50 202.6 222 44.6
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 7.4e-50 201.4 228 45.6
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 1.3e-49 200.7 232 44.0
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 3.7e-49 199.1 221 45.7
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 4.8e-49 198.7 233 43.8
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 6.2e-49 198.4 215 45.6
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 8.2e-49 198.0 224 44.2
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 1.4e-48 197.2 228 43.9
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 2.4e-48 196.4 215 46.0
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 6.9e-48 194.9 229 43.2
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 1.2e-47 194.1 207 44.9
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 1.5e-47 193.7 236 41.9
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 5.8e-47 191.8 227 43.2
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 5.8e-47 191.8 210 46.2
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 7.6e-47 191.4 227 42.7
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 7.6e-47 191.4 228 43.4
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 1.7e-46 190.3 225 41.8
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.7e-46 190.3 201 48.3
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 3.8e-46 189.1 240 41.7
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 3.8e-46 189.1 217 44.2
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.4e-45 187.2 222 41.0
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 4.2e-45 185.7 227 40.1
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 7.1e-45 184.9 229 41.5
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 7.1e-45 184.9 232 41.8
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.2e-44 184.1 221 42.5
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 3.5e-44 182.6 219 41.6
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 4.6e-44 182.2 216 41.7
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 1.0e-43 181.0 213 43.2
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.8e-43 180.3 232 42.7
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 3.0e-43 179.5 226 41.6
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.9e-43 179.1 217 41.5
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 1.5e-42 177.2 157 56.1
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 1.5e-42 177.2 217 40.6
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 1.3e-41 174.1 226 42.5
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 1.3e-41 174.1 212 42.9
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.3e-41 174.1 224 39.7
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 2.2e-41 173.3 175 42.9
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 5.9e-39 165.2 207 43.5
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 1.0e-38 164.5 221 39.8
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 2.9e-38 162.9 221 39.4
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 2.9e-38 162.9 240 39.6
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 6.5e-38 161.8 228 41.2
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 4.2e-37 159.1 238 40.3
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.4e-32 144.1 168 41.1
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 1.8e-32 143.7 161 43.5
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 1.0e-27 127.9 170 39.4
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 3.8e-22 109.4 147 40.8
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.4e-21 107.5 137 41.6
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 1.9e-21 107.1 162 37.7
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.3e-17 94.4 96 45.8
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 1.1e-16 91.3 171 30.4
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.1e-16 89.7 93 41.9
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 4.2e-13 79.3 71 50.7
SEGI_07596 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 5.5e-13 79.0 210 27.6
SEGI_23668 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 2.3e-11 73.6 213 26.8
SEGI_20716 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 1.7e-09 67.4 188 27.1
SEGI_16642 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 2.2e-09 67.0 123 34.1
SEGI_17039 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 8.2e-09 65.1 120 30.8
SEGI_24243 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 8.2e-09 65.1 210 25.2
SEGI_17763 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 5.3e-08 62.4 213 25.4
SEGI_12105 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 7.0e-08 62.0 123 31.7
SEGI_23256 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 1.0e-06 58.2 118 29.7
SEGI_25170 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 1.3e-06 57.8 129 31.0


User provided reference genes

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