Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0861 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 1.4e-09 66.2 29 100.0
CDE01G0499 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 2.5e-08 62.0 29 93.1
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 2.5e-08 62.0 29 93.1
Cfa006771 Carpinus fangiana HOM05D005826 ORTHO05D004357 3.3e-08 61.6 29 89.7
Haze_03986 Corylus avellana HOM05D005826 ORTHO05D004357 3.3e-08 61.6 29 89.7
Ciclev10012662m.g Citrus clementina HOM05D005826 ORTHO05D004357 4.3e-08 61.2 29 93.1
Cc02_g35870 Coffea canephora HOM05D005826 ORTHO05D004357 4.3e-08 61.2 29 93.1
PSO210G7107 Papaver somniferum HOM05D005826 ORTHO05D004357 4.3e-08 61.2 29 89.7
PSO761G0619 Papaver somniferum HOM05D005826 ORTHO05D004357 4.3e-08 61.2 29 89.7
Potri.005G002700 Populus trichocarpa HOM05D005826 ORTHO05D004357 4.3e-08 61.2 29 93.1
Sabra05G0000100 Salix brachista HOM05D005826 ORTHO05D004357 4.3e-08 61.2 29 93.1
Sabra05G0014200 Salix brachista HOM05D005826 ORTHO05D004357 4.3e-08 61.2 29 93.1
Sabra13G0001500 Salix brachista HOM05D005826 ORTHO05D004357 4.3e-08 61.2 29 93.1
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 4.3e-08 61.2 29 93.1
Cpa.g.sc48.51 Carica papaya HOM05D005826 ORTHO05D004357 5.7e-08 60.8 29 89.7
CsaV3_1G038040 Cucumis sativus L. HOM05D005826 ORTHO05D004357 5.7e-08 60.8 29 89.7
Manes.08G107500 Manihot esculenta HOM05D005826 ORTHO05D004357 5.7e-08 60.8 29 89.7
RcHm_v2.0_Chr3g0458551 Rosa chinensis HOM05D005826 ORTHO05D004357 5.7e-08 60.8 29 89.7
Sed0027683 Sechium edule HOM05D005826 ORTHO05D004357 5.7e-08 60.8 29 89.7
SEGI_10560 Sequoiadendron giganteum HOM05D005826 ORTHO05D004357 5.7e-08 60.8 29 89.7
EL10Ac4g09561 Beta vulgaris HOM05D005826 ORTHO05D004357 7.4e-08 60.5 29 89.7
Medtr7g111520 Medicago truncatula HOM05D005826 ORTHO05D004357 7.4e-08 60.5 29 86.2
Nn3g21953 Nelumbo nucifera HOM05D005826 ORTHO05D004357 7.4e-08 60.5 29 89.7
TAR636G1621 Trochodendron aralioides HOM05D005826 ORTHO05D004357 7.4e-08 60.5 29 89.7
HPP92_006322 Vanilla planifolia HOM05D005826 ORTHO05D004357 7.4e-08 60.5 29 89.7
HPP92_027884 Vanilla planifolia HOM05D005826 ORTHO05D004357 7.4e-08 60.5 29 89.7
Atru.chr12.1539 Acer truncatum HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
Ah.06g190730 Amaranthus hybridus HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
CAN.G1248.16 Capsicum annuum HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
CiPaw.07G036400 Carya illinoinensis HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
ClCG03G017880 Citrullus lanatus HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
MELO3C015241.2 Cucumis melo HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
MELO3C021663.2 Cucumis melo HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
Dinv24515 Davidia involucrata HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
Glyma.03G228100 Glycine max HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
Glyma.19G225400 Glycine max HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
Gohir.A13G177700 Gossypium hirsutum HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
Gohir.D13G184300 Gossypium hirsutum HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
Gorai.013G210000 Gossypium raimondii HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
Peaxi162Scf00194g00018 Petunia axillaris HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
QL03p011008 Quercus lobata HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
Hund21832 Selenicereus undatus HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
GSVIVG01031331001 Vitis vinifera HOM05D005826 ORTHO05D004357 9.7e-08 60.1 29 89.7
ATR0796G273 Amborella trichopoda HOM05D005826 ORTHO05D004357 1.3e-07 59.7 29 89.7
CANSAT54G1651 Cannabis sativa HOM05D005826 ORTHO05D004357 1.3e-07 59.7 29 86.2
FvH4_6g08510 Fragaria vesca HOM05D005826 ORTHO05D004357 1.3e-07 59.7 29 86.2
FAN02G3127 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.3e-07 59.7 29 86.2
FAN05G0435 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.3e-07 59.7 29 86.2
FAN09G2233 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.3e-07 59.7 29 86.2
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.3e-07 59.7 29 86.2
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 1.3e-07 59.7 29 86.2
TPR.G1630 Trifolium pratense HOM05D005826 ORTHO05D004357 1.3e-07 59.7 29 86.2
Hma1.2p1_0052F.1_g030390 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 1.7e-07 59.3 29 86.2
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 1.7e-07 59.3 29 86.2
MD12G1199800 Malus domestica HOM05D005826 ORTHO05D004357 1.7e-07 59.3 29 89.7
Prupe.6G304400 Prunus persica HOM05D005826 ORTHO05D004357 1.7e-07 59.3 29 89.7
Sc09g0002410 Simmondsia chinensis HOM05D005826 ORTHO05D004357 1.7e-07 59.3 29 89.7
Actinidia17738 Actinidia chinensis HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
MSTRG.27910 Avicennia marina HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 89.7
DCAR_006590 Daucus carota HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
Dinv30950 Davidia involucrata HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
Lj1g0011738 Lotus japonicus HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
MBI06_g28828_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
Nitab4.5_0002516g0020 Nicotiana tabacum HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
Nitab4.5_0005662g0030 Nicotiana tabacum HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
Solyc01g101250.3 Solanum lycopersicum HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
Sopen01g044700 Solanum pennellii HOM05D005826 ORTHO05D004357 2.2e-07 58.9 29 86.2
Aqoxy2G02470 Aquilegia oxysepala HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 82.8
CSS0017545 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 89.7
CSS0045001 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 89.7
AUR62000478 Chenopodium quinoa HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
AUR62006820 Chenopodium quinoa HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
Ca_09273_v3 Cicer arietinum L. HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
Lalb_Chr18g0046231 Lupinus albus HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
Phvul.001G222000 Phaseolus vulgaris HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
Rhsim11G0105000 Rhododendron simsii HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
vmacro01667 Vaccinium macrocarpon HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
VMungo1383G1915 Vigna mungo HOM05D005826 ORTHO05D004357 3.7e-07 58.2 29 86.2
Manes.09G181300 Manihot esculenta HOM05D005826 ORTHO05D004357 4.8e-07 57.8 29 86.2
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 4.8e-07 57.8 29 86.2
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 6.3e-07 57.4 29 86.2
ECA240G4745 Erigeron canadensis HOM05D005826 ORTHO05D004357 8.2e-07 57.0 29 86.2
HanXRQChr09g0247941 Helianthus annuus HOM05D005826 ORTHO05D004357 8.2e-07 57.0 29 86.2
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 8.2e-07 57.0 29 82.8
Mapoly0026s0010 Marchantia polymorpha HOM05D005826 ORTHO05D004357 8.2e-07 57.0 29 86.2
Os04g0115400 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 1.1e-06 56.6 29 86.2
Pp3c20_6860 Physcomitrium patens HOM05D005826 ORTHO05D004357 1.1e-06 56.6 29 79.3
Migut.N00974 Erythranthe guttata HOM05D005826 ORTHO05D004357 1.4e-06 56.2 29 79.3
Eucgr.B01823 Eucalyptus grandis HOM05D005826 ORTHO05D004357 1.4e-06 56.2 29 82.8
Lsat_1_v5_gn_7_64900 Lactuca sativa HOM05D005826 ORTHO05D004357 1.4e-06 56.2 29 86.2
MBI12_g27791_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 1.4e-06 56.2 29 82.8
unitig_26.g9561 Utricularia gibba HOM05D005826 ORTHO05D005018 1.4e-06 56.2 29 86.2
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 3.1e-06 55.1 29 82.8
AT5G26610 Arabidopsis thaliana HOM05D005826 ORTHO05D004357 3.1e-06 55.1 29 82.8
BcaC04g23633 Brassica carinata HOM05D005826 ORTHO05D004357 3.1e-06 55.1 29 82.8
A09p05710 Brassica napus HOM05D005826 ORTHO05D004357 3.1e-06 55.1 29 82.8
C09p06300 Brassica napus HOM05D005826 ORTHO05D004357 3.1e-06 55.1 29 82.8
BolC9t53550H Brassica oleracea HOM05D005826 ORTHO05D004357 3.1e-06 55.1 29 82.8
BraA09t36211Z Brassica rapa HOM05D005826 ORTHO05D004357 3.1e-06 55.1 29 82.8
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 3.1e-06 55.1 29 82.8
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 3.1e-06 55.1 29 82.8
Aa31LG11G9920 Aethionema arabicum HOM05D005826 ORTHO05D004357 4.1e-06 54.7 29 82.8
PGR083G1613 Punica granatum HOM05D005826 ORTHO05D004357 4.1e-06 54.7 29 79.3


User provided reference genes

Program Settings