Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.6e-103 379.4 192 100.0
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 9.4e-43 177.6 192 57.8
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.4e-22 110.5 191 39.3
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 7.0e-22 108.2 73 71.2
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 7.0e-22 108.2 73 74.0
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.2e-21 107.5 71 74.6
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.2e-21 107.5 193 41.5
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 2.0e-21 106.7 73 72.6
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.0e-20 104.4 191 40.3
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 1.7e-20 103.6 73 71.2
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 2.3e-20 103.2 73 69.9
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.3e-20 103.2 68 76.5
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 5.0e-20 102.1 71 70.4
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 6.6e-20 101.7 68 75.0
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 6.6e-20 101.7 68 75.0
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 6.6e-20 101.7 73 69.9
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 6.6e-20 101.7 192 39.1
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.1e-19 100.9 71 70.4
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 1.1e-19 100.9 73 67.1
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.5e-19 100.5 69 71.0
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.5e-19 100.5 73 67.1
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.9e-19 100.1 71 70.4
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.9e-19 100.1 70 67.1
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.5e-19 99.8 69 69.6
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.3e-19 99.4 73 71.2
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 4.2e-19 99.0 125 46.4
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 5.5e-19 98.6 73 64.4
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 7.2e-19 98.2 72 68.1
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 9.5e-19 97.8 73 64.4
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 1.2e-18 97.4 193 39.9
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 2.1e-18 96.7 170 38.8
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 2.1e-18 96.7 170 38.8
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 2.1e-18 96.7 67 70.1
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.1e-18 96.7 73 69.9
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.8e-18 96.3 73 65.8
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.8e-18 96.3 73 68.5
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 2.8e-18 96.3 73 68.5
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.8e-18 96.3 73 68.5
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 3.6e-18 95.9 73 65.8
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 3.6e-18 95.9 73 65.8
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.6e-18 95.9 73 68.5
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 3.6e-18 95.9 71 66.2
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.7e-18 95.5 73 69.9
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 6.1e-18 95.1 83 59.0
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 6.1e-18 95.1 83 59.0
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 6.1e-18 95.1 83 59.0
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 6.1e-18 95.1 173 37.0
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 8.0e-18 94.7 83 57.8
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 8.0e-18 94.7 73 63.0
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 8.0e-18 94.7 66 71.2
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 8.0e-18 94.7 73 65.8
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 8.0e-18 94.7 73 68.5
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 8.0e-18 94.7 73 68.5
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.0e-17 94.4 73 65.8
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 1.4e-17 94.0 73 63.0
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-17 94.0 73 63.0
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-17 94.0 73 63.0
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.4e-17 94.0 195 37.9
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.4e-17 94.0 73 61.6
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.8e-17 93.6 83 59.0
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.8e-17 93.6 83 59.0
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 1.8e-17 93.6 73 63.0
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 2.3e-17 93.2 71 63.4
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 2.3e-17 93.2 71 63.4
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 2.3e-17 93.2 71 63.4
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.3e-17 93.2 71 63.4
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.3e-17 93.2 71 63.4
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 2.3e-17 93.2 71 63.4
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.3e-17 93.2 73 65.8
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.3e-17 93.2 180 39.4
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.3e-17 93.2 180 39.4
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 3.0e-17 92.8 72 66.7
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 4.0e-17 92.4 73 63.0
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 4.0e-17 92.4 70 67.1
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 4.0e-17 92.4 71 66.2
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 4.0e-17 92.4 70 68.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 5.2e-17 92.0 72 63.9
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 5.2e-17 92.0 66 69.7
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 5.2e-17 92.0 66 69.7
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 5.2e-17 92.0 73 65.8
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 6.8e-17 91.7 70 67.1
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 6.8e-17 91.7 66 69.7
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 8.9e-17 91.3 69 68.1
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 8.9e-17 91.3 71 64.8
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 8.9e-17 91.3 73 58.9
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.2e-16 90.9 179 37.4
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 1.5e-16 90.5 73 63.0
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.5e-16 90.5 70 65.7
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 2.0e-16 90.1 71 64.8
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 2.0e-16 90.1 71 64.8
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.6e-16 89.7 66 68.2
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 2.6e-16 89.7 68 64.7
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 4.4e-16 89.0 62 72.6
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 4.4e-16 89.0 183 37.7
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 5.7e-16 88.6 67 64.2
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.7e-16 88.6 69 62.3
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 5.7e-16 88.6 71 63.4
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 5.7e-16 88.6 73 58.9
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 7.5e-16 88.2 70 64.3
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 7.5e-16 88.2 69 63.8
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 9.8e-16 87.8 69 65.2
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.3e-15 87.4 69 63.8
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.7e-15 87.0 68 64.7
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.2e-15 86.7 67 62.7
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 2.2e-15 86.7 70 64.3
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.8e-15 86.3 70 64.3
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 4.9e-15 85.5 68 64.7
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 6.3e-15 85.1 70 61.4
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 6.3e-15 85.1 67 58.2
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.1e-14 84.3 70 65.7
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.4e-14 84.0 71 56.3
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.8e-14 83.6 69 59.4
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.1e-14 82.8 67 61.2
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.0e-12 77.8 72 52.8
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 2.9e-12 76.3 69 52.2
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 3.3e-11 72.8 67 53.7
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 9.5e-11 71.2 207 28.5
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 2.8e-10 69.7 81 50.6
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.4e-09 67.4 49 65.3
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 8.9e-09 64.7 73 50.7
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 2.0e-08 63.5 67 44.8
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 3.4e-08 62.8 72 43.1
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 3.7e-07 59.3 42 61.9
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 3.7e-07 59.3 42 61.9


User provided reference genes

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