Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0774 Ceratophyllum demersum HOM05D003389 ORTHO05D003917 1.1e-60 236.5 120 100.0
CDE04G0877 Ceratophyllum demersum HOM05D003389 ORTHO05D003917 1.2e-56 223.0 119 96.6
Nn6g34315 Nelumbo nucifera HOM05D003389 ORTHO05D003917 2.8e-45 185.3 120 80.0
Dinv37703 Davidia involucrata HOM05D003389 ORTHO05D003917 1.8e-44 182.6 118 76.3
Peaxi162Scf00620g00617 Petunia axillaris HOM05D003389 ORTHO05D003917 2.4e-44 182.2 116 76.7
CSS0021110 Camellia sinensis var. sinensis HOM05D003389 ORTHO05D003917 3.1e-44 181.8 118 74.6
Nitab4.5_0008362g0010 Nicotiana tabacum HOM05D003389 ORTHO05D003917 4.1e-44 181.4 117 76.1
CAN.G981.56 Capsicum annuum HOM05D003389 ORTHO05D003917 6.9e-44 180.6 113 77.0
Cc08_g13790 Coffea canephora HOM05D003389 ORTHO05D003917 6.9e-44 180.6 109 79.8
Dinv39033 Davidia involucrata HOM05D003389 ORTHO05D003917 6.9e-44 180.6 119 76.5
Nn1g01292 Nelumbo nucifera HOM05D003389 ORTHO05D003917 6.9e-44 180.6 118 76.3
Sopen08g028470 Solanum pennellii HOM05D003389 ORTHO05D003917 1.2e-43 179.9 119 76.5
Duzib068G0926 Durio zibethinus HOM05D003389 ORTHO05D003917 2.0e-43 179.1 117 73.5
Lsat_1_v5_gn_6_10400 Lactuca sativa HOM05D003389 ORTHO05D003917 2.6e-43 178.7 115 77.4
PGSC0003DMG400022735 Solanum tuberosum HOM05D003389 ORTHO05D003917 3.4e-43 178.3 119 75.6
TWI15G1193 Tripterygium wilfordii HOM05D003389 ORTHO05D003917 4.5e-43 177.9 112 76.8
Gohir.A08G177400 Gossypium hirsutum HOM05D003389 ORTHO05D003917 5.9e-43 177.6 117 73.5
MBI11_g05095_MAGBIO Magnolia biondii HOM05D003389 ORTHO05D003917 7.7e-43 177.2 117 76.9
GSVIVG01019881001 Vitis vinifera HOM05D003389 ORTHO05D003917 7.7e-43 177.2 116 75.0
arahy.Tifrunner.gnm1.ann1.18T4MA Arachis hypogaea HOM05D003389 ORTHO05D003917 1.0e-42 176.8 109 79.8
arahy.Tifrunner.gnm1.ann1.HGX6IC Arachis hypogaea HOM05D003389 ORTHO05D003917 1.0e-42 176.8 109 79.8
Potri.001G112300 Populus trichocarpa HOM05D003389 ORTHO05D003917 1.0e-42 176.8 113 77.9
Gohir.D08G195800 Gossypium hirsutum HOM05D003389 ORTHO05D003917 1.3e-42 176.4 117 72.6
Gorai.004G206500 Gossypium raimondii HOM05D003389 ORTHO05D003917 1.3e-42 176.4 117 72.6
HanXRQChr11g0336621 Helianthus annuus HOM05D003389 ORTHO05D003917 1.3e-42 176.4 109 78.9
Manes.02G030300 Manihot esculenta HOM05D003389 ORTHO05D003917 1.3e-42 176.4 126 70.6
Phvul.002G153200 Phaseolus vulgaris HOM05D003389 ORTHO05D003917 1.3e-42 176.4 109 78.0
VMungo1215G1985 Vigna mungo HOM05D003389 ORTHO05D003917 1.3e-42 176.4 111 76.6
Cpa.g.sc29.33 Carica papaya HOM05D003389 ORTHO05D003917 1.7e-42 176.0 117 73.5
ECA233G2019 Erigeron canadensis HOM05D003389 ORTHO05D003917 1.7e-42 176.0 116 75.0
Sabra01G0085800 Salix brachista HOM05D003389 ORTHO05D003917 1.7e-42 176.0 113 77.0
Duzib084G0706 Durio zibethinus HOM05D003389 ORTHO05D003917 2.2e-42 175.6 117 71.8
Glyma.01G214700 Glycine max HOM05D003389 ORTHO05D003917 2.2e-42 175.6 109 78.0
TWI81G0612 Tripterygium wilfordii HOM05D003389 ORTHO05D003917 2.9e-42 175.3 109 78.0
Lalb_Chr09g0324691 Lupinus albus HOM05D003389 ORTHO05D003917 3.8e-42 174.9 109 76.1
Oeu001902.1 Olea europaea HOM05D003389 ORTHO05D003917 3.8e-42 174.9 117 73.5
Migut.E01161 Erythranthe guttata HOM05D003389 ORTHO05D003917 5.0e-42 174.5 118 72.9
PGR031G2775 Punica granatum HOM05D003389 ORTHO05D003917 5.0e-42 174.5 109 76.1
CiPaw.12G100200 Carya illinoinensis HOM05D003389 ORTHO05D003917 6.5e-42 174.1 117 71.8
TAR636G1874 Trochodendron aralioides HOM05D003389 ORTHO05D003917 6.5e-42 174.1 120 73.3
Manes.01G069600 Manihot esculenta HOM05D003389 ORTHO05D003917 8.5e-42 173.7 126 70.6
Psat2g181120 Pisum sativum HOM05D003389 ORTHO05D003917 8.5e-42 173.7 109 78.0
Glyma.11G027200 Glycine max HOM05D003389 ORTHO05D003917 1.1e-41 173.3 109 77.1
Potri.003G119800 Populus trichocarpa HOM05D003389 ORTHO05D003917 1.1e-41 173.3 109 78.9
Sabra03G0084000 Salix brachista HOM05D003389 ORTHO05D003917 1.1e-41 173.3 113 76.1
Gohir.A09G193500 Gossypium hirsutum HOM05D003389 ORTHO05D003917 1.4e-41 172.9 117 71.8
Gorai.006G210500 Gossypium raimondii HOM05D003389 ORTHO05D003917 1.4e-41 172.9 117 71.8
Lj2g0004762 Lotus japonicus HOM05D003389 ORTHO05D003917 1.4e-41 172.9 109 78.0
Sc07g0009480 Simmondsia chinensis HOM05D003389 ORTHO05D003917 1.4e-41 172.9 107 79.4
Thecc.03G268500 Theobroma cacao HOM05D003389 ORTHO05D003917 1.4e-41 172.9 114 73.7
CANSAT21G1884 Cannabis sativa HOM05D003389 ORTHO05D003917 1.9e-41 172.6 109 76.1
Cfa012079 Carpinus fangiana HOM05D003389 ORTHO05D003917 1.9e-41 172.6 118 71.2
Duzib205G0992 Durio zibethinus HOM05D003389 ORTHO05D003917 1.9e-41 172.6 109 77.1
Gohir.D09G187700 Gossypium hirsutum HOM05D003389 ORTHO05D003917 1.9e-41 172.6 117 70.9
THA.LOC104814202 Tarenaya hassleriana HOM05D003389 ORTHO05D003917 1.9e-41 172.6 117 72.6
HPP92_022000 Vanilla planifolia HOM05D003389 ORTHO05D003917 1.9e-41 172.6 118 73.7
Atru.chr9.1507 Acer truncatum HOM05D003389 ORTHO05D003917 2.5e-41 172.2 119 72.3
MD04G1069900 Malus domestica HOM05D003389 ORTHO05D003917 2.5e-41 172.2 111 73.9
Actinidia05234 Actinidia chinensis HOM05D003389 ORTHO05D003917 3.2e-41 171.8 118 73.7
Ciclev10019075m.g Citrus clementina HOM05D003389 ORTHO05D003917 3.2e-41 171.8 117 71.8
RcHm_v2.0_Chr7g0199771 Rosa chinensis HOM05D003389 ORTHO05D003917 3.2e-41 171.8 111 73.9
Sed0023838 Sechium edule HOM05D003389 ORTHO05D003917 3.2e-41 171.8 109 77.1
CsaV3_5G003350 Cucumis sativus L. HOM05D003389 ORTHO05D003917 4.2e-41 171.4 108 77.8
Gorai.007G022100 Gossypium raimondii HOM05D003389 ORTHO05D003917 5.5e-41 171.0 109 77.1
Sed0009929 Sechium edule HOM05D003389 ORTHO05D003917 5.5e-41 171.0 109 76.1
SGA_v2.0_scaffold144G35980 Striga asiatica HOM05D003389 ORTHO05D003917 5.5e-41 171.0 113 74.3
FvH4_5g01250 Fragaria vesca HOM05D003389 ORTHO05D003917 7.2e-41 170.6 111 73.9
FAN04G3242 Fragaria x ananassa HOM05D003389 ORTHO05D003917 7.2e-41 170.6 111 73.9
FAN08G2451 Fragaria x ananassa HOM05D003389 ORTHO05D003917 7.2e-41 170.6 111 73.9
FAN13G0159 Fragaria x ananassa HOM05D003389 ORTHO05D003917 7.2e-41 170.6 111 73.9
QL12p016621 Quercus lobata HOM05D003389 ORTHO05D003917 7.2e-41 170.6 109 75.2
THA.LOC104806361 Tarenaya hassleriana HOM05D003389 ORTHO05D003917 7.2e-41 170.6 117 70.9
EL10Ac5g12710 Beta vulgaris HOM05D003389 ORTHO05D003917 9.4e-41 170.2 121 69.4
Ca_06667_v3 Cicer arietinum L. HOM05D003389 ORTHO05D003917 9.4e-41 170.2 107 77.6
FAN18G0817 Fragaria x ananassa HOM05D003389 ORTHO05D003917 9.4e-41 170.2 111 73.0
Medtr5g011090 Medicago truncatula HOM05D003389 ORTHO05D003917 1.2e-40 169.9 110 78.2
SalBow6G3358 Salvia bowleyana HOM05D003389 ORTHO05D003917 1.2e-40 169.9 118 72.9
PSO478G1498 Papaver somniferum HOM05D003389 ORTHO05D003917 1.6e-40 169.5 121 71.1
PSO782G1906 Papaver somniferum HOM05D003389 ORTHO05D003917 1.6e-40 169.5 121 71.1
Gohir.D11G020800 Gossypium hirsutum HOM05D003389 ORTHO05D003917 2.1e-40 169.1 109 76.1
Gohir.A11G021100 Gossypium hirsutum HOM05D003389 ORTHO05D003917 2.7e-40 168.7 109 76.1
ECA240G1577 Erigeron canadensis HOM05D003389 ORTHO05D003917 3.6e-40 168.3 117 69.2
SGA_v2.0_scaffold286G47125 Striga asiatica HOM05D003389 ORTHO05D003917 3.6e-40 168.3 117 69.2
Aqoxy5G03952 Aquilegia oxysepala HOM05D003389 ORTHO05D003917 4.7e-40 167.9 122 69.7
Prupe.5G088000 Prunus persica HOM05D003389 ORTHO05D003917 7.9e-40 167.2 109 72.5
Ah.12g057800 Amaranthus hybridus HOM05D003389 ORTHO05D003917 1.0e-39 166.8 110 74.5
Carub.0006s3095 Capsella rubella HOM05D003389 ORTHO05D003917 1.0e-39 166.8 109 74.3
AT4G11860 Arabidopsis thaliana HOM05D003389 ORTHO05D003917 1.4e-39 166.4 109 73.4
CARHR254440 Cardamine hirsuta HOM05D003389 ORTHO05D003917 1.8e-39 166.0 114 69.3
CiPaw.11G142600 Carya illinoinensis HOM05D003389 ORTHO05D003917 1.8e-39 166.0 117 67.5
MD06G1071400 Malus domestica HOM05D003389 ORTHO05D003917 1.8e-39 166.0 111 71.2
Hund11535 Selenicereus undatus HOM05D003389 ORTHO05D003917 1.8e-39 166.0 107 76.6
AUR62017315 Chenopodium quinoa HOM05D003389 ORTHO05D003917 3.0e-39 165.2 110 74.5
Aa31LG9G10590 Aethionema arabicum HOM05D003389 ORTHO05D003917 6.7e-39 164.1 108 74.1
Thhalv10028490m.g Eutrema salsugineum HOM05D003389 ORTHO05D003917 1.1e-38 163.3 109 73.4
AUR62010575 Chenopodium quinoa HOM05D003389 ORTHO05D003917 1.5e-38 162.9 110 73.6
Sp6g05610 Schrenkiella parvula HOM05D003389 ORTHO05D003917 2.0e-38 162.5 117 69.2
A09p27250 Brassica napus HOM05D003389 ORTHO05D003917 2.6e-38 162.2 120 68.3
ATR0661G488 Amborella trichopoda HOM05D003389 ORTHO05D003917 3.3e-38 161.8 116 66.4
Os06g0712400 Oryza sativa ssp. japonica HOM05D003389 ORTHO05D003917 3.3e-38 161.8 108 72.2
BraA09t38293Z Brassica rapa HOM05D003389 ORTHO05D003917 4.4e-38 161.4 119 68.9
Hund14708 Selenicereus undatus HOM05D003389 ORTHO05D003917 5.7e-38 161.0 122 65.6
SalBow1G6995 Salvia bowleyana HOM05D003262 ORTHO05D003917 9.7e-38 160.2 117 65.8
unitig_699.g19759 Utricularia gibba HOM05D003389 ORTHO05D003917 1.3e-37 159.8 117 67.5
BcaB01g01683 Brassica carinata HOM05D003389 ORTHO05D003917 1.7e-37 159.5 109 71.6
BcaC04g21168 Brassica carinata HOM05D003389 ORTHO05D003917 2.8e-37 158.7 109 70.6
C09p34580 Brassica napus HOM05D003389 ORTHO05D003917 2.8e-37 158.7 109 70.6
BolC9t56305H Brassica oleracea HOM05D003389 ORTHO05D003917 2.8e-37 158.7 109 70.6
Zm00001eb227790 Zea mays HOM05D003389 ORTHO05D003917 3.7e-37 158.3 108 73.1
Mapoly0108s0010 Marchantia polymorpha HOM05D003389 ORTHO05D003917 6.3e-37 157.5 117 65.0
SEGI_34401 Sequoiadendron giganteum HOM05D003389 ORTHO05D003917 6.3e-37 157.5 117 67.5
Lsat_1_v5_gn_6_79100 Lactuca sativa HOM05D003389 ORTHO05D003917 5.3e-36 154.5 125 64.0
AagrBONN_evm.TU.Sc2ySwM_228.3893 Anthoceros agrestis HOM05D003389 ORTHO05D003917 9.1e-36 153.7 117 62.4
SMO367G0360 Selaginella moellendorffii HOM05D003389 ORTHO05D003917 3.5e-35 151.8 106 70.8
SHI13491 Sapria himalayana HOM05D003389 ORTHO05D003917 3.8e-34 148.3 109 66.1
CSS0044016 Camellia sinensis var. sinensis HOM05D003389 ORTHO05D003917 5.5e-33 144.4 118 64.4
Pp3c12_2860 Physcomitrium patens HOM05D003389 ORTHO05D003917 2.3e-31 139.0 117 59.0
Pp3c17_3230 Physcomitrium patens HOM05D003389 ORTHO05D003917 3.9e-31 138.3 104 64.4
Eucgr.D01936 Eucalyptus grandis HOM05D003389 ORTHO05D003917 2.0e-30 136.0 117 57.3
RcHm_v2.0_Chr1g0379891 Rosa chinensis HOM05D003389 ORTHO05D003917 7.4e-30 134.0 111 62.2
Hma1.2p1_0138F.1_g062730 Hydrangea macrophylla HOM05D003389 ORTHO05D003917 9.7e-30 133.7 118 61.9
Actinidia14499 Actinidia chinensis HOM05D003389 ORTHO05D003917 5.9e-27 124.4 81 74.1
Lj2C201G3 Lonicera japonica HOM05D003389 ORTHO05D003917 2.5e-25 119.0 76 77.6
Nitab4.5_0001714g0090 Nicotiana tabacum HOM05D003389 ORTHO05D003917 7.2e-25 117.5 80 78.8
COL.COLO4_23793 Corchorus olitorius HOM05D003389 ORTHO05D003917 1.6e-24 116.3 75 77.3
A01p14230 Brassica napus HOM05D003389 ORTHO05D003917 2.1e-24 115.9 109 55.0
Lj2C200G2 Lonicera japonica HOM05D003389 ORTHO05D003917 2.1e-24 115.9 75 78.7
Glyma.04G257602 Glycine max HOM05D003389 ORTHO05D003917 2.7e-24 115.5 75 78.7
TPR.G19581 Trifolium pratense HOM05D003389 ORTHO05D003917 2.7e-24 115.5 76 71.1
BraA01t01370Z Brassica rapa HOM05D003389 ORTHO05D003917 8.0e-24 114.0 109 53.2
Glyma.03G264902 Glycine max HOM05D003389 ORTHO05D003917 8.0e-24 114.0 75 77.3
Aa31LG6G5010 Aethionema arabicum HOM05D003389 ORTHO05D003917 1.4e-23 113.2 109 56.0
C01p17500 Brassica napus HOM05D003389 ORTHO05D003917 1.8e-23 112.8 107 56.1
Sp7g21050 Schrenkiella parvula HOM05D003389 ORTHO05D003917 3.0e-23 112.1 109 53.2
TAR636G0614 Trochodendron aralioides HOM05D003389 ORTHO05D003917 3.0e-23 112.1 75 74.7
Thhalv10027519m.g Eutrema salsugineum HOM05D003389 ORTHO05D003917 6.7e-23 110.9 115 51.3
vmacro00214 Vaccinium macrocarpon HOM05D003389 ORTHO05D003917 1.5e-22 109.8 94 63.8
BcaC09g51049 Brassica carinata HOM05D003389 ORTHO05D003917 2.2e-21 105.9 109 53.2
ClCG01G003270 Citrullus lanatus HOM05D003389 ORTHO05D003917 2.2e-21 105.9 71 73.2
Rhsim11G0008100 Rhododendron simsii HOM05D003389 ORTHO05D003917 2.8e-21 105.5 93 65.6
BolC1t01690H Brassica oleracea HOM05D003389 ORTHO05D003917 3.7e-21 105.1 110 52.7
DCAR_008431 Daucus carota HOM05D003389 ORTHO05D003917 3.7e-21 105.1 79 72.2
MELO3C005619.2 Cucumis melo HOM05D003389 ORTHO05D003917 6.3e-21 104.4 66 77.3
Haze_08980 Corylus avellana HOM05D003389 ORTHO05D003917 8.3e-21 104.0 105 55.2
Migut.A00905 Erythranthe guttata HOM05D003389 ORTHO05D003917 8.3e-21 104.0 155 41.3
BcaNung01008 Brassica carinata HOM05D003389 ORTHO05D003917 2.4e-20 102.4 115 48.7
Migut.A00906 Erythranthe guttata HOM05D003389 ORTHO05D003917 7.0e-20 100.9 117 47.9
HanXRQChr02g0043491 Helianthus annuus HOM05D003389 ORTHO05D003917 1.3e-18 96.7 119 43.7
MCO06G239 Micromonas commoda HOM05D003389 ORTHO05D003917 1.5e-17 93.2 133 42.1
BraA03t14599Z Brassica rapa HOM05D003389 ORTHO05D003917 2.5e-17 92.4 108 46.3
BraA03t14615Z Brassica rapa HOM05D003389 ORTHO05D003917 2.5e-17 92.4 108 46.3
FAN09G4798 Fragaria x ananassa HOM05D003389 ORTHO05D003917 7.2e-17 90.9 107 49.5
Cre06.g304850 Chlamydomonas reinhardtii HOM05D003389 ORTHO05D003917 1.0e-15 87.0 113 46.0
AL7G30560 Arabidopsis lyrata HOM05D003389 ORTHO05D003917 8.8e-15 84.0 107 43.0
Eucgr.D01938 Eucalyptus grandis HOM05D003389 ORTHO05D003917 1.2e-14 83.6 53 75.5
PRCOL_00006333 Prasinoderma coloniale HOM05D003389 ORTHO05D003917 1.2e-14 83.6 111 44.1
TPR.G14842 Trifolium pratense HOM05D003389 ORTHO05D003917 1.5e-14 83.2 51 80.4
AT4G22960 Arabidopsis thaliana HOM05D003389 ORTHO05D003917 2.8e-13 79.0 119 38.7
TAR636G3266 Trochodendron aralioides HOM05D003389 ORTHO05D003917 6.3e-13 77.8 118 46.6
PSO302G0081 Papaver somniferum HOM05D003389 ORTHO05D003917 1.8e-12 76.3 109 38.5
PSO170G2389 Papaver somniferum HOM05D003389 ORTHO05D003917 3.1e-12 75.5 109 38.5
BcaB01g02667 Brassica carinata HOM05D003389 ORTHO05D003917 1.6e-11 73.2 81 51.9
HanXRQChr02g0043501 Helianthus annuus HOM05D003389 ORTHO05D003917 2.0e-11 72.8 119 35.3
CBR_g38139 Chara braunii HOM05D003389 ORTHO05D003917 7.7e-11 70.9 71 54.9
FAN09G1540 Fragaria x ananassa HOM05D003389 ORTHO05D003917 2.3e-10 69.3 127 39.4
Lj8A241G19 Lonicera japonica HOM05D003389 ORTHO05D003917 3.8e-10 68.6 90 51.1
Eucgr.D01937 Eucalyptus grandis HOM05D003389 ORTHO05D003917 5.0e-10 68.2 73 46.6
Zm00001eb033290 Zea mays HOM05D003389 ORTHO05D003917 1.5e-09 66.6 118 33.9
Carub.0007s1831 Capsella rubella HOM05D003389 ORTHO05D003917 7.2e-09 64.3 93 35.5
MELO3C003304.2 Cucumis melo HOM05D003389 ORTHO05D003917 5.2e-07 58.2 55 54.5
COL.COLO4_11055 Corchorus olitorius HOM05D003389 ORTHO05D003917 2.0e-06 56.2 33 72.7
MBI04_g06622_MAGBIO Magnolia biondii HOM05D003389 ORTHO05D003917 2.6e-06 55.8 61 49.2
SGA_v2.0_scaffold555G52910 Striga asiatica HOM05D024566 ORTHO05D020930 5.7e-06 54.7 100 39.0


User provided reference genes

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