Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0753 Ceratophyllum demersum HOM05D005354 ORTHO05D006315 1.8e-51 205.7 110 100.0
CDE04G0953 Ceratophyllum demersum HOM05D005354 ORTHO05D006315 9.8e-45 183.3 105 92.4
Nn1g01007 Nelumbo nucifera HOM05D005354 ORTHO05D006315 1.8e-38 162.5 105 78.1
TAR629G2416 Trochodendron aralioides HOM05D005354 ORTHO05D006315 7.5e-37 157.1 105 75.2
ATR0317G109 Amborella trichopoda HOM05D005354 ORTHO05D006315 4.9e-36 154.5 105 74.3
Dinv39144 Davidia involucrata HOM05D005354 ORTHO05D006315 8.3e-36 153.7 105 75.2
Actinidia05204 Actinidia chinensis HOM05D005354 ORTHO05D006315 1.9e-35 152.5 105 73.3
Dinv21636 Davidia involucrata HOM05D005354 ORTHO05D006315 1.6e-34 149.4 104 75.0
Actinidia27464 Actinidia chinensis HOM05D005354 ORTHO05D006315 2.1e-34 149.1 105 71.4
CSS0003507 Camellia sinensis var. sinensis HOM05D005354 ORTHO05D006315 2.7e-34 148.7 105 71.4
CSS0039308 Camellia sinensis var. sinensis HOM05D005354 ORTHO05D006315 2.7e-34 148.7 105 71.4
MBI04_g09494_MAGBIO Magnolia biondii HOM05D005354 ORTHO05D006315 3.5e-34 148.3 105 69.5
GSVIVG01001321001 Vitis vinifera HOM05D005354 ORTHO05D006315 4.6e-34 147.9 105 71.4
CSS0011263 Camellia sinensis var. sinensis HOM05D005354 ORTHO05D006315 1.3e-33 146.4 105 68.6
Sed0003796 Sechium edule HOM05D005354 ORTHO05D006315 2.3e-33 145.6 105 67.6
MELO3C013942.2 Cucumis melo HOM05D005354 ORTHO05D006315 8.6e-33 143.7 105 66.7
AUR62007515 Chenopodium quinoa HOM05D005354 ORTHO05D006315 1.1e-32 143.3 105 66.7
Haze_07917 Corylus avellana HOM05D005354 ORTHO05D006315 1.1e-32 143.3 105 66.7
CsaV3_3G002740 Cucumis sativus L. HOM05D005354 ORTHO05D006315 1.1e-32 143.3 105 66.7
CiPaw.11G153900 Carya illinoinensis HOM05D005354 ORTHO05D006315 1.9e-32 142.5 105 68.6
Oeu040216.1 Olea europaea HOM05D005354 ORTHO05D006315 3.3e-32 141.7 105 66.7
QL12p012213 Quercus lobata HOM05D005354 ORTHO05D006315 4.3e-32 141.4 105 65.7
AUR62042791 Chenopodium quinoa HOM05D005354 ORTHO05D006315 5.6e-32 141.0 105 65.7
ClCG10G002710 Citrullus lanatus HOM05D005354 ORTHO05D006315 5.6e-32 141.0 105 65.7
vmacro14088 Vaccinium macrocarpon HOM05D005354 ORTHO05D006315 5.6e-32 141.0 105 67.6
PSO170G3683 Papaver somniferum HOM05D005354 ORTHO05D006315 9.5e-32 140.2 105 66.7
AUR62044247 Chenopodium quinoa HOM05D005354 ORTHO05D006315 1.2e-31 139.8 105 65.7
Lalb_Chr09g0324401 Lupinus albus HOM05D005354 ORTHO05D006315 1.2e-31 139.8 105 67.6
Medtr5g012530 Medicago truncatula HOM05D005354 ORTHO05D006315 1.2e-31 139.8 105 63.8
MSTRG.25527 Avicennia marina HOM05D005354 ORTHO05D006315 1.6e-31 139.4 105 64.8
Lj2g0013106 Lotus japonicus HOM05D005354 ORTHO05D006315 2.8e-31 138.7 105 64.8
PSO017G6196 Papaver somniferum HOM05D005354 ORTHO05D006315 2.8e-31 138.7 105 65.7
Manes.02G039200 Manihot esculenta HOM05D005354 ORTHO05D006315 4.7e-31 137.9 105 66.7
Rhsim07G0108200 Rhododendron simsii HOM05D005354 ORTHO05D006315 4.7e-31 137.9 105 65.7
Lalb_Chr05g0214491 Lupinus albus HOM05D005354 ORTHO05D006315 6.2e-31 137.5 105 66.7
Manes.01G080300 Manihot esculenta HOM05D005354 ORTHO05D006315 6.2e-31 137.5 105 67.6
DCAR_027776 Daucus carota HOM05D005354 ORTHO05D006315 8.1e-31 137.1 105 65.7
Potri.003G076600 Populus trichocarpa HOM05D005354 ORTHO05D006315 1.1e-30 136.7 105 66.7
TPR.G25879 Trifolium pratense HOM05D005354 ORTHO05D006315 1.1e-30 136.7 105 63.8
CAN.G1367.6 Capsicum annuum HOM05D005354 ORTHO05D006315 1.4e-30 136.3 105 61.9
Psat2g177520 Pisum sativum HOM05D005354 ORTHO05D006315 1.4e-30 136.3 105 64.8
Potri.001G158200 Populus trichocarpa HOM05D005354 ORTHO05D006315 1.4e-30 136.3 105 66.7
Hund14561 Selenicereus undatus HOM05D005354 ORTHO05D006315 1.8e-30 136.0 105 66.7
Solyc08g078660.3 Solanum lycopersicum HOM05D005354 ORTHO05D006315 2.3e-30 135.6 105 61.0
Migut.E00837 Erythranthe guttata HOM05D005354 ORTHO05D006315 3.1e-30 135.2 105 61.9
Migut.E01656 Erythranthe guttata HOM05D005354 ORTHO05D006315 3.1e-30 135.2 105 61.9
Nitab4.5_0007598g0020 Nicotiana tabacum HOM05D005354 ORTHO05D006315 3.1e-30 135.2 105 61.0
Sabra01G0133300 Salix brachista HOM05D005354 ORTHO05D006315 3.1e-30 135.2 105 65.7
Sopen08g027140 Solanum pennellii HOM05D005354 ORTHO05D006315 3.1e-30 135.2 105 61.0
MD06G1057900 Malus domestica HOM05D005354 ORTHO05D006315 4.0e-30 134.8 105 61.9
Aqoxy7G00759 Aquilegia oxysepala HOM05D005354 ORTHO05D006315 5.2e-30 134.4 105 63.8
Nitab4.5_0000312g0100 Nicotiana tabacum HOM05D005354 ORTHO05D006315 5.2e-30 134.4 105 61.0
Peaxi162Scf00174g00027 Petunia axillaris HOM05D005354 ORTHO05D006315 6.8e-30 134.0 105 61.0
Ah.02g116720 Amaranthus hybridus HOM05D005354 ORTHO05D006315 8.9e-30 133.7 105 62.9
Glyma.01G209800 Glycine max HOM05D005354 ORTHO05D006315 8.9e-30 133.7 105 62.9
Prupe.5G069200 Prunus persica HOM05D005354 ORTHO05D006315 8.9e-30 133.7 105 62.9
EL10Ac5g13072 Beta vulgaris HOM05D005354 ORTHO05D006315 1.2e-29 133.3 105 64.8
Ca_24574_v3 Cicer arietinum L. HOM05D005354 ORTHO05D006315 1.5e-29 132.9 105 61.9
Glyma.11G032400 Glycine max HOM05D005354 ORTHO05D006315 1.5e-29 132.9 105 61.9
PGR042G1820 Punica granatum HOM05D005354 ORTHO05D006315 2.0e-29 132.5 105 64.8
arahy.Tifrunner.gnm1.ann1.BT71C1 Arachis hypogaea HOM05D005354 ORTHO05D006315 5.8e-29 131.0 105 61.0
arahy.Tifrunner.gnm1.ann1.LCH2QT Arachis hypogaea HOM05D005354 ORTHO05D006315 5.8e-29 131.0 105 61.0
Sc01g0008460 Simmondsia chinensis HOM05D005354 ORTHO05D006315 5.8e-29 131.0 132 53.0
CANSAT21G0216 Cannabis sativa HOM05D005354 ORTHO05D006315 7.5e-29 130.6 105 60.0
Ciclev10019626m.g Citrus clementina HOM05D005354 ORTHO05D006315 7.5e-29 130.6 105 61.0
Thecc.03G252000 Theobroma cacao HOM05D005354 ORTHO05D006315 7.5e-29 130.6 105 63.8
Lsat_1_v5_gn_6_91180 Lactuca sativa HOM05D005354 ORTHO05D006315 1.3e-28 129.8 105 62.9
Cc08_g12480 Coffea canephora HOM05D005354 ORTHO05D006315 1.7e-28 129.4 105 63.8
Phvul.002G062800 Phaseolus vulgaris HOM05D005354 ORTHO05D006315 1.7e-28 129.4 105 60.0
RcHm_v2.0_Chr7g0203181 Rosa chinensis HOM05D005354 ORTHO05D006315 2.2e-28 129.0 105 60.0
Os10g0507800 Oryza sativa ssp. japonica HOM05D005354 ORTHO05D006315 2.9e-28 128.6 105 61.0
HPP92_015107 Vanilla planifolia HOM05D005354 ORTHO05D006315 4.9e-28 127.9 105 60.0
HPP92_015115 Vanilla planifolia HOM05D005354 ORTHO05D006315 4.9e-28 127.9 105 60.0
VMungo1215G2766 Vigna mungo HOM05D005354 ORTHO05D006315 4.9e-28 127.9 105 59.0
SGA_v2.0_scaffold54G19448 Striga asiatica HOM05D005354 ORTHO05D006315 6.4e-28 127.5 105 61.9
COL.COLO4_37182 Corchorus olitorius HOM05D005354 ORTHO05D006315 1.1e-27 126.7 105 61.9
FvH4_5g18830 Fragaria vesca HOM05D005354 ORTHO05D006315 1.1e-27 126.7 105 58.1
FAN08G0881 Fragaria x ananassa HOM05D005354 ORTHO05D006315 1.1e-27 126.7 105 58.1
FAN18G0938 Fragaria x ananassa HOM05D005354 ORTHO05D006315 1.1e-27 126.7 105 58.1
TWI81G0349 Tripterygium wilfordii HOM05D005354 ORTHO05D006315 1.1e-27 126.7 105 62.9
HanXRQChr03g0088591 Helianthus annuus HOM05D005354 ORTHO05D006315 1.4e-27 126.3 105 61.9
Zm00001eb043970 Zea mays HOM05D005354 ORTHO05D006315 1.4e-27 126.3 105 62.9
Zm00001eb442210 Zea mays HOM05D005354 ORTHO05D006315 1.4e-27 126.3 105 62.9
Atru.chr9.1319 Acer truncatum HOM05D005354 ORTHO05D006315 1.9e-27 125.9 107 63.6
Duzib084G0473 Durio zibethinus HOM05D005354 ORTHO05D006315 3.2e-27 125.2 105 60.0
FAN13G0823 Fragaria x ananassa HOM05D005354 ORTHO05D006315 4.1e-27 124.8 105 57.1
THA.LOC104815494 Tarenaya hassleriana HOM05D005354 ORTHO05D006315 5.4e-27 124.4 105 60.0
SHI35069 Sapria himalayana HOM05D005354 ORTHO05D006315 7.1e-27 124.0 105 61.0
FAN18G2353 Fragaria x ananassa HOM05D005354 ORTHO05D006315 9.2e-27 123.6 105 57.1
FAN04G2371 Fragaria x ananassa HOM05D005354 ORTHO05D006315 1.2e-26 123.2 105 56.2
AL4G31810 Arabidopsis lyrata HOM05D005354 ORTHO05D006315 1.6e-26 122.9 105 60.0
BcaB06g28865 Brassica carinata HOM05D005354 ORTHO05D006315 3.5e-26 121.7 105 59.0
Sp4g17990 Schrenkiella parvula HOM05D005354 ORTHO05D006315 3.5e-26 121.7 105 59.0
AT2G35720 Arabidopsis thaliana HOM05D005354 ORTHO05D006315 6.0e-26 120.9 105 59.0
Carub.0004s1745 Capsella rubella HOM05D005354 ORTHO05D006315 7.8e-26 120.6 105 58.1
TWI60G0726 Tripterygium wilfordii HOM05D005354 ORTHO05D006315 1.0e-25 120.2 105 59.0
CARHR129960 Cardamine hirsuta HOM05D005354 ORTHO05D006315 1.3e-25 119.8 105 58.1
Eucgr.E00426 Eucalyptus grandis HOM05D005354 ORTHO05D006315 1.7e-25 119.4 105 56.2
Thhalv10016484m.g Eutrema salsugineum HOM05D005354 ORTHO05D006315 3.0e-25 118.6 105 57.1
BcaC02g07676 Brassica carinata HOM05D005354 ORTHO05D006315 3.9e-25 118.2 105 56.2
A04p27170 Brassica napus HOM05D005354 ORTHO05D006315 3.9e-25 118.2 105 56.2
C04p64680 Brassica napus HOM05D005354 ORTHO05D006315 3.9e-25 118.2 105 56.2
BolC4t27945H Brassica oleracea HOM05D005354 ORTHO05D006315 3.9e-25 118.2 105 56.2
BraA04t18215Z Brassica rapa HOM05D005354 ORTHO05D006315 3.9e-25 118.2 105 56.2
unitig_8.g3912 Utricularia gibba HOM05D005354 ORTHO05D006315 3.9e-25 118.2 101 59.4
Aa31LG9G12210 Aethionema arabicum HOM05D000808 ORTHO05D006315 5.1e-25 117.9 105 58.1
Gohir.A03G008300 Gossypium hirsutum HOM05D005354 ORTHO05D006315 1.9e-24 115.9 105 57.1
Gohir.D03G162600 Gossypium hirsutum HOM05D005354 ORTHO05D006315 2.5e-24 115.5 105 57.1
Gorai.003G171200 Gossypium raimondii HOM05D005354 ORTHO05D006315 2.5e-24 115.5 105 57.1
ECA240G4831 Erigeron canadensis HOM05D005354 ORTHO05D006315 3.3e-24 115.2 105 57.1
Lj2A217G28 Lonicera japonica HOM05D005354 ORTHO05D006315 9.5e-24 113.6 79 72.2
Pp3c26_4130 Physcomitrium patens HOM05D005354 ORTHO05D006315 4.7e-23 111.3 105 53.3
Mapoly0099s0041 Marchantia polymorpha HOM05D005354 ORTHO05D006315 1.1e-22 110.2 105 51.4
Zm00001eb442460 Zea mays HOM05D005354 ORTHO05D006315 1.8e-22 109.4 135 48.1
Pp3c3_14420 Physcomitrium patens HOM05D005354 ORTHO05D006315 2.4e-22 109.0 105 52.4
Ca_24575_v3 Cicer arietinum L. HOM05D005354 ORTHO05D006315 1.5e-21 106.3 105 50.5
Prupe.5G069100 Prunus persica HOM05D005354 ORTHO05D006315 1.6e-18 96.3 105 50.5
SMO172G0088 Selaginella moellendorffii HOM05D005354 ORTHO05D006315 4.6e-18 94.7 106 43.4
SMO172G0123 Selaginella moellendorffii HOM05D005354 ORTHO05D006315 2.3e-17 92.4 106 42.5
Pp3c26_4030 Physcomitrium patens HOM05D005354 ORTHO05D006315 3.3e-16 88.6 105 45.7
CBR_g27963 Chara braunii HOM05D005354 ORTHO05D006315 1.1e-08 63.5 105 39.0
HPP92_015035 Vanilla planifolia HOM05D005354 ORTHO05D006315 3.3e-08 62.0 55 58.2
Hma1.2p1_0299F.1_g117910 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 6.2e-07 57.8 38 73.7


User provided reference genes

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