Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 8.5e-71 270.4 154 100.0
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.4e-25 120.2 147 47.6
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.9e-25 119.8 129 48.8
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.9e-25 119.8 136 50.7
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.9e-25 119.8 135 51.1
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 2.4e-25 119.4 118 53.4
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 9.3e-25 117.5 101 62.4
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 9.3e-25 117.5 120 55.8
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 1.6e-24 116.7 119 53.8
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.6e-24 116.7 120 54.2
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 1.6e-24 116.7 131 48.9
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 2.7e-24 115.9 107 56.1
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 4.6e-24 115.2 143 46.2
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 7.8e-24 114.4 130 46.9
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 7.8e-24 114.4 126 50.8
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 7.8e-24 114.4 111 54.1
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 1.3e-23 113.6 101 58.4
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.3e-23 113.6 125 47.2
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 1.7e-23 113.2 113 53.1
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 3.0e-23 112.5 103 54.4
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 5.1e-23 111.7 148 44.6
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 6.6e-23 111.3 128 44.5
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 8.7e-23 110.9 119 49.6
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 8.7e-23 110.9 127 50.4
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.5e-22 110.2 130 48.5
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.9e-22 109.8 105 55.2
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.9e-22 109.8 121 49.6
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.9e-22 109.8 98 61.2
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 1.9e-22 109.8 103 53.4
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 2.5e-22 109.4 141 46.8
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 2.5e-22 109.4 135 47.4
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 2.5e-22 109.4 107 53.3
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 3.3e-22 109.0 119 52.1
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 4.3e-22 108.6 121 48.8
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.3e-22 108.6 121 48.8
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 4.3e-22 108.6 110 49.1
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 5.6e-22 108.2 141 42.6
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 5.6e-22 108.2 121 48.8
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 7.3e-22 107.8 96 57.3
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 7.3e-22 107.8 138 45.7
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 9.6e-22 107.5 137 48.2
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 9.6e-22 107.5 100 58.0
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 1.3e-21 107.1 106 52.8
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 1.3e-21 107.1 117 51.3
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.3e-21 107.1 144 45.1
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.3e-21 107.1 154 42.9
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.3e-21 107.1 117 51.3
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.3e-21 107.1 103 52.4
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.6e-21 106.7 121 47.9
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 1.6e-21 106.7 102 52.9
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.6e-21 106.7 92 56.5
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 3.6e-21 105.5 92 55.4
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 3.6e-21 105.5 96 56.2
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 8.1e-21 104.4 96 56.2
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 1.1e-20 104.0 123 47.2
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 1.1e-20 104.0 130 46.2
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.1e-20 104.0 127 49.6
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 1.1e-20 104.0 92 54.3
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.4e-20 103.6 130 52.3
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.8e-20 103.2 96 54.2
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.8e-20 103.2 92 54.3
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 2.4e-20 102.8 89 59.6
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 2.4e-20 102.8 148 43.2
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 3.1e-20 102.4 107 48.6
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 3.1e-20 102.4 102 50.0
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 3.1e-20 102.4 101 52.5
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 4.0e-20 102.1 96 54.2
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 4.0e-20 102.1 97 55.7
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 4.0e-20 102.1 99 51.5
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 4.0e-20 102.1 85 62.4
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 5.3e-20 101.7 115 49.6
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 5.3e-20 101.7 93 55.9
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 6.9e-20 101.3 93 61.3
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 6.9e-20 101.3 89 56.2
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 9.0e-20 100.9 103 54.4
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 1.2e-19 100.5 97 55.7
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.2e-19 100.5 96 53.1
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.2e-19 100.5 91 56.0
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 1.5e-19 100.1 96 53.1
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.5e-19 100.1 143 40.6
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 2.6e-19 99.4 121 46.3
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 3.4e-19 99.0 93 51.6
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 4.4e-19 98.6 91 54.9
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 4.4e-19 98.6 119 46.2
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 4.4e-19 98.6 94 53.2
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 5.8e-19 98.2 89 55.1
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 1.3e-18 97.1 89 55.1
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 1.3e-18 97.1 78 64.1
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 3.8e-18 95.5 88 55.7
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 3.8e-18 95.5 97 50.5
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 4.9e-18 95.1 115 44.3
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 6.4e-18 94.7 121 46.3
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 4.2e-17 92.0 97 44.3
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 7.1e-17 91.3 89 51.7
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 7.1e-17 91.3 132 40.9
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.6e-16 90.1 82 51.2
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 1.3e-15 87.0 114 39.5
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 2.3e-15 86.3 110 40.0
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 1.9e-14 83.2 54 75.9
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.3e-14 82.4 70 60.0
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 4.3e-14 82.0 78 52.6
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-14 81.6 92 42.4
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 5.6e-14 81.6 90 54.4
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 9.6e-14 80.9 129 37.2
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 4.0e-12 75.5 92 46.7
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.2e-11 73.9 84 45.2
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.6e-11 72.8 88 44.3
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 3.4e-11 72.4 96 37.5
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 1.3e-10 70.5 91 36.3
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 2.2e-10 69.7 91 39.6
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 3.2e-09 65.9 88 37.5
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 7.1e-09 64.7 95 34.7


User provided reference genes

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