Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0722 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 1.3e-130 469.9 268 100.0
CiPaw.05G048700 Carya illinoinensis HOM05D004640 ORTHO05D005489 5.3e-60 235.3 292 55.5
MBI01_g44452_MAGBIO Magnolia biondii HOM05D004640 ORTHO05D005489 9.0e-60 234.6 305 53.4
Oeu032223.3 Olea europaea HOM05D000396 ORTHO05D000116 2.6e-59 233.0 295 53.9
Lsat_1_v5_gn_5_71601 Lactuca sativa HOM05D004640 ORTHO05D005489 7.7e-59 231.5 292 56.8
Gohir.A04G121200 Gossypium hirsutum HOM05D004640 ORTHO05D005489 2.2e-58 229.9 303 52.5
Duzib052G0332 Durio zibethinus HOM05D004640 ORTHO05D005489 3.8e-58 229.2 314 51.3
Duzib132G0532 Durio zibethinus HOM05D004640 ORTHO05D005489 6.5e-58 228.4 297 53.2
HPP92_017742 Vanilla planifolia HOM05D004640 ORTHO05D005489 6.5e-58 228.4 291 52.6
CSS0031954 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 1.9e-57 226.9 303 51.5
Aqoxy1G01535 Aquilegia oxysepala HOM05D004640 ORTHO05D005489 2.5e-57 226.5 294 53.1
CSS0010715 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 7.2e-57 224.9 301 51.5
TPR.G2079 Trifolium pratense HOM05D004640 ORTHO05D005489 7.2e-57 224.9 292 53.8
Os03g0659900 Oryza sativa ssp. japonica HOM05D004640 ORTHO05D005489 1.2e-56 224.2 290 52.4
Zm00001eb218090 Zea mays HOM05D004640 ORTHO05D005489 1.2e-56 224.2 291 52.6
Gorai.012G151900 Gossypium raimondii HOM05D004640 ORTHO05D005489 2.1e-56 223.4 330 47.9
ECA233G0813 Erigeron canadensis HOM05D004640 ORTHO05D005489 2.7e-56 223.0 291 52.9
QL02p099200 Quercus lobata HOM05D004640 ORTHO05D005489 6.1e-56 221.9 290 53.4
Hma1.2p1_0296F.1_g116830 Hydrangea macrophylla HOM05D004640 ORTHO05D005489 7.9e-56 221.5 293 52.9
Potri.001G211700 Populus trichocarpa HOM05D004640 ORTHO05D005489 1.0e-55 221.1 293 52.2
PGR142G2697 Punica granatum HOM05D004640 ORTHO05D005489 1.0e-55 221.1 286 53.5
Glyma.08G187100 Glycine max HOM05D004640 ORTHO05D005489 1.8e-55 220.3 300 52.3
Medtr2g006880 Medicago truncatula HOM05D004640 ORTHO05D005489 2.3e-55 219.9 292 53.4
Atru.chr6.619 Acer truncatum HOM05D004640 ORTHO05D005489 3.0e-55 219.5 289 52.9
Atru.chr6.621_Atru.chr6.622 Acer truncatum HOM05D004640 ORTHO05D005489 3.0e-55 219.5 289 52.9
Cc09_g07620 Coffea canephora HOM05D004640 ORTHO05D005489 5.1e-55 218.8 298 52.3
Sc09g0001940 Simmondsia chinensis HOM05D004640 ORTHO05D005489 5.1e-55 218.8 298 51.7
Prupe.1G004500 Prunus persica HOM05D004640 ORTHO05D005489 8.8e-55 218.0 295 52.2
Glyma.15G045900 Glycine max HOM05D004640 ORTHO05D005489 1.1e-54 217.6 289 53.3
EL10Ac4g09724 Beta vulgaris HOM05D004640 ORTHO05D005489 1.5e-54 217.2 303 51.8
Sabra01G0163500 Salix brachista HOM05D004640 ORTHO05D005489 1.5e-54 217.2 298 53.0
VMungo0540G1095 Vigna mungo HOM05D004640 ORTHO05D005489 1.5e-54 217.2 286 53.5
TWI23G1121 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 3.3e-54 216.1 299 52.2
Actinidia19942 Actinidia chinensis HOM05D004640 ORTHO05D005489 4.3e-54 215.7 295 51.5
MD08G1235100 Malus domestica HOM05D004640 ORTHO05D005489 4.3e-54 215.7 295 52.5
Psat1g221200 Pisum sativum HOM05D004640 ORTHO05D005489 4.3e-54 215.7 287 53.3
Hund21765 Selenicereus undatus HOM05D004640 ORTHO05D005489 5.7e-54 215.3 300 50.3
Manes.10G125900 Manihot esculenta HOM05D004640 ORTHO05D005489 7.4e-54 214.9 297 52.9
TWI14G1252 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 7.4e-54 214.9 299 51.8
Ciclev10000505m.g Citrus clementina HOM05D004640 ORTHO05D005489 9.7e-54 214.5 295 50.2
Oeu046366.1 Olea europaea HOM05D004640 ORTHO05D005489 9.7e-54 214.5 277 53.4
COL.COLO4_11782 Corchorus olitorius HOM05D004640 ORTHO05D005489 1.3e-53 214.2 295 52.5
RcHm_v2.0_Chr1g0332251 Rosa chinensis HOM05D004640 ORTHO05D005489 1.3e-53 214.2 295 52.2
Eucgr.I02737 Eucalyptus grandis HOM05D004640 ORTHO05D005489 1.7e-53 213.8 294 52.7
FAN08G0534 Fragaria x ananassa HOM05D004640 ORTHO05D005489 1.7e-53 213.8 293 51.9
HanXRQChr15g0469061 Helianthus annuus HOM05D004640 ORTHO05D005489 1.7e-53 213.8 274 54.4
FvH4_5g29191 Fragaria vesca HOM05D004640 ORTHO05D005489 2.8e-53 213.0 293 51.5
Thecc.02G088200 Theobroma cacao HOM05D004640 ORTHO05D005489 3.7e-53 212.6 295 52.9
vmacro12737 Vaccinium macrocarpon HOM05D004640 ORTHO05D005489 4.8e-53 212.2 311 49.2
Lj6g0021650 Lotus japonicus HOM05D004640 ORTHO05D005489 6.3e-53 211.8 291 51.5
Rhsim05G0203300 Rhododendron simsii HOM05D004640 ORTHO05D005489 8.2e-53 211.5 310 50.0
MSTRG.23232 Avicennia marina HOM05D004640 ORTHO05D005489 1.8e-52 210.3 294 51.0
Gohir.D04G163900 Gossypium hirsutum HOM05D004640 ORTHO05D005489 1.8e-52 210.3 294 50.7
CANSAT11G0894 Cannabis sativa HOM05D004640 ORTHO05D005489 6.9e-52 208.4 281 51.2
AUR62006957 Chenopodium quinoa HOM05D004640 ORTHO05D005489 1.5e-51 207.2 302 50.0
Thhalv10023347m.g Eutrema salsugineum HOM05D004640 ORTHO05D005489 2.6e-51 206.5 294 50.3
PSO541G2962 Papaver somniferum HOM05D004640 ORTHO05D005489 2.6e-51 206.5 309 48.9
Gohir.D01G005100 Gossypium hirsutum HOM05D004640 ORTHO05D005489 3.4e-51 206.1 289 52.2
AUR62000605 Chenopodium quinoa HOM05D004640 ORTHO05D005489 4.5e-51 205.7 302 49.3
Sopen04g014430 Solanum pennellii HOM05D004640 ORTHO05D005489 4.5e-51 205.7 302 49.7
PSO675G0104 Papaver somniferum HOM05D004640 ORTHO05D005489 7.7e-51 204.9 305 49.2
CAN.G124.21 Capsicum annuum HOM05D004640 ORTHO05D005489 1.3e-50 204.1 295 50.2
Migut.H02548 Erythranthe guttata HOM05D004640 ORTHO05D005489 1.7e-50 203.8 302 49.0
Gorai.002G006000 Gossypium raimondii HOM05D004640 ORTHO05D005489 1.7e-50 203.8 295 50.5
MD15G1426300 Malus domestica HOM05D004640 ORTHO05D005489 3.8e-50 202.6 297 51.2
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 1.4e-49 200.7 288 50.7
TWI59G0201 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 5.5e-49 198.7 266 53.0
AL2G15460 Arabidopsis lyrata HOM05D004640 ORTHO05D005489 9.4e-49 198.0 294 50.0
Carub.0002s0421 Capsella rubella HOM05D004640 ORTHO05D005489 9.4e-49 198.0 283 50.5
MELO3C019462.2 Cucumis melo HOM05D004640 ORTHO05D005489 9.4e-49 198.0 291 48.8
CsaV3_3G019120 Cucumis sativus L. HOM05D004640 ORTHO05D005489 1.6e-48 197.2 291 48.5
THA.LOC104809619 Tarenaya hassleriana HOM05D004640 ORTHO05D005489 2.7e-48 196.4 289 49.8
BcaC09g49343 Brassica carinata HOM05D004640 ORTHO05D005489 1.0e-47 194.5 292 49.0
BcaB04g20302 Brassica carinata HOM05D004640 ORTHO05D005489 2.3e-47 193.4 294 48.6
Haze_01729 Corylus avellana HOM05D004640 ORTHO05D005489 3.9e-47 192.6 274 50.7
A01p29810 Brassica napus HOM05D004640 ORTHO05D005489 8.8e-47 191.4 292 48.6
C01p37670 Brassica napus HOM05D004640 ORTHO05D005489 8.8e-47 191.4 292 48.3
BolC1t03731H Brassica oleracea HOM05D004640 ORTHO05D005489 8.8e-47 191.4 292 48.3
BraA01t03109Z Brassica rapa HOM05D004640 ORTHO05D005489 8.8e-47 191.4 292 48.6
BcaC06g31828 Brassica carinata HOM05D004640 ORTHO05D005489 1.5e-46 190.7 293 48.1
ATR0763G087 Amborella trichopoda HOM05D004640 ORTHO05D005489 2.6e-46 189.9 298 48.3
Solyc04g026280.2 Solanum lycopersicum HOM05D004640 ORTHO05D005489 3.3e-46 189.5 268 50.0
BcaC02g10600 Brassica carinata HOM05D004640 ORTHO05D005489 4.4e-46 189.1 290 47.2
C04p25650 Brassica napus HOM05D004640 ORTHO05D005489 4.4e-46 189.1 290 47.2
C05p50900 Brassica napus HOM05D004640 ORTHO05D005489 4.4e-46 189.1 290 47.2
Sp2g03520 Schrenkiella parvula HOM05D004640 ORTHO05D005489 7.4e-46 188.3 306 46.7
BraSC39t46176Z Brassica rapa HOM05D004640 ORTHO05D005489 6.3e-45 185.3 291 47.8
arahy.Tifrunner.gnm1.ann1.Y1PSG0 Arachis hypogaea HOM05D004640 ORTHO05D005489 2.4e-44 183.3 351 42.7
Gohir.A01G005001 Gossypium hirsutum HOM05D004640 ORTHO05D005489 2.0e-43 180.3 267 50.2
AT1G60995 Arabidopsis thaliana HOM05D004640 ORTHO05D005489 4.5e-43 179.1 292 47.6
Ca_00068_v3 Cicer arietinum L. HOM05D004640 ORTHO05D005489 4.5e-43 179.1 281 47.7
arahy.Tifrunner.gnm1.ann1.8G9BB5 Arachis hypogaea HOM05D004640 ORTHO05D005489 1.3e-42 177.6 292 46.2
Mapoly0014s0041 Marchantia polymorpha HOM05D004640 ORTHO05D005489 2.9e-42 176.4 177 61.6
Dinv24776 Davidia involucrata HOM05D004640 ORTHO05D005489 8.5e-42 174.9 213 57.7
unitig_0.g396 Utricularia gibba HOM05D004640 ORTHO05D005489 1.4e-41 174.1 283 51.6
Phvul.006G215300 Phaseolus vulgaris HOM05D004640 ORTHO05D005489 1.9e-41 173.7 198 58.6
TAR381G0517 Trochodendron aralioides HOM05D004640 ORTHO05D005489 2.5e-41 173.3 275 48.0
CDE12G0158 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 5.5e-41 172.2 157 70.1
Lalb_Chr20g0123511 Lupinus albus HOM05D004640 ORTHO05D005489 7.2e-41 171.8 216 56.5
Nitab4.5_0001785g0050 Nicotiana tabacum HOM05D004640 ORTHO05D005489 1.2e-40 171.0 350 40.6
Sed0025782 Sechium edule HOM05D004640 ORTHO05D005489 1.6e-40 170.6 184 61.4
GSVIVG01022882001 Vitis vinifera HOM05D004640 ORTHO05D005489 3.6e-40 169.5 182 61.5
FAN13G0955 Fragaria x ananassa HOM05D004640 ORTHO05D005489 1.8e-39 167.2 223 53.4
Pp3c3_37820 Physcomitrium patens HOM05D004640 ORTHO05D005489 1.8e-39 167.2 200 53.5
FAN04G1948 Fragaria x ananassa HOM05D004640 ORTHO05D005489 9.7e-38 161.4 192 56.8
CDE12G0675 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 1.4e-36 157.5 172 60.5
AagrBONN_evm.TU.Sc2ySwM_344.1404 Anthoceros agrestis HOM05D004640 ORTHO05D005489 1.8e-36 157.1 156 61.5
Actinidia36578 Actinidia chinensis HOM05D004640 ORTHO05D005489 4.1e-36 156.0 172 61.0
SMO116G0341 Selaginella moellendorffii HOM05D004640 ORTHO05D005489 5.9e-35 152.1 291 40.9
Peaxi162Scf00577g00411 Petunia axillaris HOM05D004640 ORTHO05D005489 1.3e-34 151.0 262 42.7
ClCG05G009610 Citrullus lanatus HOM05D004640 ORTHO05D005489 8.5e-34 148.3 260 45.0
Hund07189 Selenicereus undatus HOM05D004640 ORTHO05D005489 8.0e-32 141.7 267 40.8
DCAR_021303 Daucus carota HOM05D004640 ORTHO05D005489 2.3e-31 140.2 266 44.4
SGA_v2.0_scaffold51G18853 Striga asiatica HOM05D004640 ORTHO05D005489 2.2e-29 133.7 316 45.3
EL10Ac4g09783 Beta vulgaris HOM05D004640 ORTHO05D005489 2.8e-29 133.3 188 48.9
CBR_g54224 Chara braunii HOM05D004640 ORTHO05D005489 1.1e-28 131.3 156 55.8
Nitab4.5_0004809g0070 Nicotiana tabacum HOM05D004640 ORTHO05D005489 1.8e-28 130.6 272 38.2
TAR625G1136 Trochodendron aralioides HOM05D004640 ORTHO05D005489 3.1e-28 129.8 139 61.9
Nn7g37934 Nelumbo nucifera HOM05D004640 ORTHO05D005489 6.5e-26 122.1 139 59.7
EL10Ac4g09779 Beta vulgaris HOM05D004640 ORTHO05D005489 9.4e-25 118.2 253 39.1
Lj4C822G11 Lonicera japonica HOM05D004640 ORTHO05D005489 1.2e-24 117.9 139 58.3
FAN18G0226 Fragaria x ananassa HOM05D004640 ORTHO05D005489 4.7e-24 115.9 204 47.5
Manes.07G017650 Manihot esculenta HOM05D004640 ORTHO05D005489 2.6e-22 110.2 142 56.3
BolC4t24244H Brassica oleracea HOM05D004640 ORTHO05D005489 1.1e-20 104.8 82 74.4
BNapus_Darmor_BZH_scaffold_271p00020 Brassica napus HOM05D004640 ORTHO05D005489 9.1e-20 101.7 148 48.6
RcHm_v2.0_Chr7g0230911 Rosa chinensis HOM05D004640 ORTHO05D005489 7.7e-19 98.6 85 69.4
Ah.06g188240 Amaranthus hybridus HOM05D004640 ORTHO05D005489 5.4e-12 75.9 124 49.2
arahy.Tifrunner.gnm1.ann1.2GJ950 Arachis hypogaea HOM05D004640 ORTHO05D005489 1.0e-07 61.6 76 52.6
TAR625G0012 Trochodendron aralioides HOM05D004640 ORTHO05D005489 6.8e-07 58.9 50 66.0
RcHm_v2.0_Chr6g0266101 Rosa chinensis HOM05D004640 ORTHO05D005489 2.0e-06 57.4 30 93.3


User provided reference genes

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