Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0709 Ceratophyllum demersum HOM05D007625 ORTHO05D009738 4.4e-132 474.6 226 100.0
MBI18_g04687_MAGBIO Magnolia biondii HOM05D007625 ORTHO05D009738 2.4e-74 282.7 255 55.3
Rhsim02G0009500 Rhododendron simsii HOM05D007625 ORTHO05D009738 2.7e-73 279.3 254 54.3
TWI09G0101 Tripterygium wilfordii HOM05D007625 ORTHO05D009738 2.7e-73 279.3 253 56.1
Actinidia00027 Actinidia chinensis HOM05D007625 ORTHO05D009738 3.0e-72 275.8 251 56.2
CSS0007271 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 6.6e-72 274.6 252 56.7
Thecc.04G284200 Theobroma cacao HOM05D007625 ORTHO05D009738 1.1e-71 273.9 255 54.5
Prupe.1G137400 Prunus persica HOM05D007625 ORTHO05D009738 2.5e-71 272.7 252 54.8
Ciclev10005679m.g Citrus clementina HOM05D007625 ORTHO05D009738 7.3e-71 271.2 250 54.4
TAR633G2367 Trochodendron aralioides HOM05D007625 ORTHO05D009738 7.3e-71 271.2 252 57.1
PSO017G7039 Papaver somniferum HOM05D007625 ORTHO05D009738 9.6e-71 270.8 256 54.3
QL06p008815 Quercus lobata HOM05D007625 ORTHO05D009738 2.8e-70 269.2 254 55.9
CSS0032939 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 6.2e-70 268.1 271 52.8
BcaB06g25757 Brassica carinata HOM05D007625 ORTHO05D009738 8.1e-70 267.7 247 55.9
SGA_v2.0_scaffold428G51521 Striga asiatica HOM05D007625 ORTHO05D009738 5.3e-69 265.0 248 58.9
Sp3g14890 Schrenkiella parvula HOM05D007625 ORTHO05D009738 9.0e-69 264.2 250 54.0
Atru.chr4.2832 Acer truncatum HOM05D007625 ORTHO05D009738 1.5e-68 263.5 249 52.6
CANSAT78G1499 Cannabis sativa HOM05D007625 ORTHO05D009738 4.5e-68 261.9 251 53.8
Manes.03G194700 Manihot esculenta HOM05D007625 ORTHO05D009738 5.8e-68 261.5 256 55.1
Thhalv10021369m.g Eutrema salsugineum HOM05D007625 ORTHO05D009738 7.6e-68 261.2 250 54.0
PGR031G0588 Punica granatum HOM05D007625 ORTHO05D009738 1.3e-67 260.4 251 51.4
CARHR091770 Cardamine hirsuta HOM05D007625 ORTHO05D009738 1.7e-67 260.0 250 52.8
Duzib212G0442 Durio zibethinus HOM05D007625 ORTHO05D009738 3.8e-67 258.8 255 51.8
GSVIVG01017755001 Vitis vinifera HOM05D007625 ORTHO05D009738 4.9e-67 258.5 241 55.2
Lj4g0027770 Lotus japonicus HOM05D007625 ORTHO05D009738 8.4e-67 257.7 256 53.5
Hund20557 Selenicereus undatus HOM05D007625 ORTHO05D009738 8.4e-67 257.7 252 52.8
Gohir.A09G239300 Gossypium hirsutum HOM05D007625 ORTHO05D009738 1.9e-66 256.5 255 51.4
Lsat_1_v5_gn_5_53001 Lactuca sativa HOM05D007625 ORTHO05D009738 2.4e-66 256.1 242 55.0
Aqoxy2G02997 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 3.2e-66 255.8 252 52.8
Gohir.D09G240200 Gossypium hirsutum HOM05D007625 ORTHO05D009738 3.2e-66 255.8 257 51.4
Nn3g21433 Nelumbo nucifera HOM05D007625 ORTHO05D009738 5.5e-66 255.0 223 60.1
ECA240G3588 Erigeron canadensis HOM05D007625 ORTHO05D009738 7.1e-66 254.6 246 54.5
AL3G29430 Arabidopsis lyrata HOM05D007625 ORTHO05D009738 2.7e-65 252.7 250 52.4
Medtr4g119840 Medicago truncatula HOM05D007625 ORTHO05D009738 2.7e-65 252.7 256 50.8
BolC5t33727H Brassica oleracea HOM05D007625 ORTHO05D009738 3.5e-65 252.3 275 49.1
Ca_21505_v3 Cicer arietinum L. HOM05D007625 ORTHO05D009738 3.5e-65 252.3 256 51.6
Migut.N00092 Erythranthe guttata HOM05D007625 ORTHO05D009738 4.6e-65 251.9 250 52.8
BraA05t22123Z Brassica rapa HOM05D007625 ORTHO05D009738 6.0e-65 251.5 272 50.4
Lalb_Chr13g0303611 Lupinus albus HOM05D007625 ORTHO05D009738 7.9e-65 251.1 256 52.0
TPR.G3171 Trifolium pratense HOM05D007625 ORTHO05D009738 1.0e-64 250.8 259 51.0
ATR0796G164 Amborella trichopoda HOM05D007625 ORTHO05D009738 1.3e-64 250.4 256 52.3
FAN07G2640 Fragaria x ananassa HOM05D007625 ORTHO05D009738 1.8e-64 250.0 258 48.4
MD13G1169000 Malus domestica HOM05D007625 ORTHO05D009738 1.8e-64 250.0 249 51.0
DCAR_027078 Daucus carota HOM05D007625 ORTHO05D009738 3.0e-64 249.2 254 51.6
Glyma.07G247900 Glycine max HOM05D007625 ORTHO05D009738 3.9e-64 248.8 258 51.9
Psat4g025880 Pisum sativum HOM05D007625 ORTHO05D009738 5.1e-64 248.4 252 51.2
VMungo1215G1867 Vigna mungo HOM05D007625 ORTHO05D009738 5.1e-64 248.4 254 52.0
FvH4_4g17960 Fragaria vesca HOM05D007625 ORTHO05D009738 8.7e-64 247.7 258 48.1
RcHm_v2.0_Chr4g0422131 Rosa chinensis HOM05D007625 ORTHO05D009738 8.7e-64 247.7 258 47.7
Rhsim02G0010500 Rhododendron simsii HOM05D007625 ORTHO05D009738 1.9e-63 246.5 245 50.2
arahy.Tifrunner.gnm1.ann1.96EVWK Arachis hypogaea HOM05D007625 ORTHO05D009738 3.3e-63 245.7 258 50.8
Sabra10G0014200 Salix brachista HOM05D007625 ORTHO05D009738 3.3e-63 245.7 254 53.5
arahy.Tifrunner.gnm1.ann1.QKB3E6 Arachis hypogaea HOM05D007625 ORTHO05D009738 4.3e-63 245.4 258 50.4
AT3G16565 Arabidopsis thaliana HOM05D007625 ORTHO05D009738 5.6e-63 245.0 283 48.8
C05p49750 Brassica napus HOM05D007625 ORTHO05D009738 9.6e-63 244.2 261 50.2
Os01g0120400 Oryza sativa ssp. japonica HOM05D007625 ORTHO05D009738 3.7e-62 242.3 252 49.6
Phvul.003G105100 Phaseolus vulgaris HOM05D007625 ORTHO05D009738 3.7e-62 242.3 254 50.8
BcaNung06438 Brassica carinata HOM05D007625 ORTHO05D009738 4.8e-62 241.9 224 54.5
HanXRQChr03g0080751 Helianthus annuus HOM05D007625 ORTHO05D009738 3.1e-61 239.2 247 50.6
Cc03_g01990 Coffea canephora HOM05D007625 ORTHO05D009738 5.3e-61 238.4 245 51.8
Eucgr.B01310 Eucalyptus grandis HOM05D007625 ORTHO05D009738 5.8e-60 235.0 236 54.7
FAN17G2144 Fragaria x ananassa HOM05D007625 ORTHO05D009738 5.8e-60 235.0 284 44.4
Potri.010G024900 Populus trichocarpa HOM05D007625 ORTHO05D009738 2.2e-59 233.0 245 53.5
Gorai.006G263200 Gossypium raimondii HOM05D007625 ORTHO05D009738 6.5e-59 231.5 239 49.0
Aa31LG8G3700 Aethionema arabicum HOM05D007625 ORTHO05D009738 2.5e-58 229.6 246 50.0
Dinv44384 Davidia involucrata HOM05D007625 ORTHO05D005073 3.2e-58 229.2 253 50.2
Pp3c1_7890 Physcomitrium patens HOM05D007625 ORTHO05D009738 3.2e-58 229.2 252 49.6
SalBow5G0239 Salvia bowleyana HOM05D007625 ORTHO05D009738 4.6e-57 225.3 220 53.2
FAN12G1696 Fragaria x ananassa HOM05D007625 ORTHO05D009738 7.9e-57 224.6 241 46.5
FAN12G4294 Fragaria x ananassa HOM05D007625 ORTHO05D009738 7.9e-57 224.6 244 46.7
vmacro15237 Vaccinium macrocarpon HOM05D007625 ORTHO05D009738 1.5e-55 220.3 246 48.8
Hma1.2p1_1567F.1_g291060 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 1.9e-55 219.9 211 55.5
SMO356G0461 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 2.1e-54 216.5 245 47.3
Hma1.2p1_0078F.1_g040640 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 2.4e-53 213.0 205 56.1
Cpa.g.sc16.167 Carica papaya HOM05D007625 ORTHO05D009738 3.2e-50 202.6 194 52.6
SMO002G0002 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 1.0e-48 197.6 236 45.8
Lj3A819G38 Lonicera japonica HOM05D007625 ORTHO05D009738 3.0e-48 196.1 268 44.0
Lj3A816T27 Lonicera japonica HOM05D007625 ORTHO05D009738 1.9e-47 193.4 216 49.1
Sc19g0005180 Simmondsia chinensis HOM05D007625 ORTHO05D009738 3.1e-45 186.0 221 47.1
Carub.0003s1629 Capsella rubella HOM05D007625 ORTHO05D009738 1.2e-44 184.1 123 68.3
EL10Ac3g06592 Beta vulgaris HOM05D007625 ORTHO05D009738 3.8e-43 179.1 225 44.9
AUR62035873 Chenopodium quinoa HOM05D007625 ORTHO05D009738 9.4e-42 174.5 194 47.4
AagrBONN_evm.TU.Sc2ySwM_228.2358 Anthoceros agrestis HOM05D007625 ORTHO05D009738 3.6e-41 172.6 181 52.5
MCO16G322 Micromonas commoda HOM05D007625 ORTHO05D009738 1.1e-34 151.0 257 38.5
Zm00001eb334800 Zea mays HOM05D007625 ORTHO05D009738 5.5e-34 148.7 180 43.9
Glyma.17G026200 Glycine max HOM05D007625 ORTHO05D009738 2.1e-33 146.7 360 31.1
unitig_0.g621 Utricularia gibba HOM05D007625 ORTHO05D009738 3.7e-22 109.4 130 44.6
BcaB03g15776 Brassica carinata HOM05D007625 ORTHO05D009738 7.7e-20 101.7 97 52.6
Aqoxy2G02999 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 5.4e-13 79.0 62 58.1
Cpa.g.c47082 Carica papaya HOM05D007625 ORTHO05D009738 5.4e-13 79.0 74 47.3
Hma1.2p1_0785F.1_g217410 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 7.0e-13 78.6 49 67.3
Medtr4g123440 Medicago truncatula HOM05D007625 ORTHO05D009738 8.5e-11 71.6 100 39.0
MD16G1169600 Malus domestica HOM05D007625 ORTHO05D009738 9.4e-10 68.2 79 41.8
Pp3s155_80 Physcomitrium patens HOM05D001816 ORTHO05D034380 6.1e-09 65.5 227 22.9


User provided reference genes

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