Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0693 Ceratophyllum demersum HOM05D001967 ORTHO05D001929 4.7e-64 247.7 121 100.0
CDE06G0145 Ceratophyllum demersum HOM05D001967 ORTHO05D001929 9.5e-33 143.7 84 84.5
PSO063G7129 Papaver somniferum HOM05D001967 ORTHO05D001929 8.9e-15 84.0 83 51.8
TAR629G0880 Trochodendron aralioides HOM05D001967 ORTHO05D001929 1.5e-14 83.2 87 51.7
PSO782G0197 Papaver somniferum HOM05D001967 ORTHO05D001929 3.7e-13 78.6 83 50.6
Potri.013G078100 Populus trichocarpa HOM05D001967 ORTHO05D001929 3.7e-13 78.6 87 52.9
Aqoxy3G02387 Aquilegia oxysepala HOM05D001967 ORTHO05D001929 4.9e-13 78.2 81 51.9
GSVIVG01024331001 Vitis vinifera HOM05D001967 ORTHO05D001929 6.4e-13 77.8 83 53.0
Thecc.05G222200 Theobroma cacao HOM05D001967 ORTHO05D001929 1.1e-12 77.0 87 51.7
Nn1g00514 Nelumbo nucifera HOM05D001967 ORTHO05D001929 1.9e-12 76.3 87 51.7
Atru.chr12.1955 Acer truncatum HOM05D001967 ORTHO05D001929 5.4e-12 74.7 78 55.1
Eucgr.A02989 Eucalyptus grandis HOM05D001967 ORTHO05D001929 5.4e-12 74.7 85 49.4
MBI04_g22935_MAGBIO Magnolia biondii HOM05D001967 ORTHO05D001929 7.1e-12 74.3 85 50.6
CSS0024609 Camellia sinensis var. sinensis HOM05D001967 ORTHO05D001929 9.2e-12 73.9 80 52.5
Potri.019G041700 Populus trichocarpa HOM05D001967 ORTHO05D001929 9.2e-12 73.9 85 50.6
Sabra19G0052100 Salix brachista HOM05D001967 ORTHO05D001929 9.2e-12 73.9 61 62.3
THA.LOC104802932 Tarenaya hassleriana HOM05D001967 ORTHO05D001929 9.2e-12 73.9 117 41.9
TWI60G1608 Tripterygium wilfordii HOM05D001967 ORTHO05D001929 9.2e-12 73.9 61 60.7
Gorai.007G348300 Gossypium raimondii HOM05D001967 ORTHO05D001929 1.2e-11 73.6 86 48.8
Actinidia33615 Actinidia chinensis HOM05D001189 ORTHO05D001027 1.6e-11 73.2 87 49.4
COL.COLO4_15148 Corchorus olitorius HOM05D001967 ORTHO05D001929 1.6e-11 73.2 87 51.7
Ca_24430_v3 Cicer arietinum L. HOM05D001967 ORTHO05D001929 2.1e-11 72.8 89 51.7
MD01G1238800 Malus domestica HOM05D001967 ORTHO05D001929 2.1e-11 72.8 58 62.1
MD07G1310700 Malus domestica HOM05D001967 ORTHO05D001929 2.1e-11 72.8 64 56.2
TAR636G1479 Trochodendron aralioides HOM05D001967 ORTHO05D001929 2.1e-11 72.8 87 47.1
CANSAT21G0930 Cannabis sativa HOM05D001967 ORTHO05D001929 4.6e-11 71.6 49 69.4
LjContig00222g0009289 Lotus japonicus HOM05D001967 ORTHO05D001929 4.6e-11 71.6 87 49.4
TWI34G0142 Tripterygium wilfordii HOM05D001967 ORTHO05D001929 4.6e-11 71.6 61 60.7
Gohir.A11G303000 Gossypium hirsutum HOM05D001967 ORTHO05D001929 6.0e-11 71.2 87 48.3
Gohir.A13G157300 Gossypium hirsutum HOM05D001967 ORTHO05D001929 6.0e-11 71.2 87 50.6
Gohir.D11G318300 Gossypium hirsutum HOM05D001967 ORTHO05D001929 6.0e-11 71.2 87 48.3
QL09p020820 Quercus lobata HOM05D001967 ORTHO05D001929 6.0e-11 71.2 61 57.4
Sp6g27490 Schrenkiella parvula HOM05D001967 ORTHO05D001929 6.0e-11 71.2 78 48.7
Cfa016072 Carpinus fangiana HOM05D001967 ORTHO05D001929 7.8e-11 70.9 87 47.1
AUR62002090 Chenopodium quinoa HOM05D001967 ORTHO05D001929 7.8e-11 70.9 46 73.9
Glyma.01G234200 Glycine max HOM05D001967 ORTHO05D001929 7.8e-11 70.9 62 62.9
Carub.0006s1487 Capsella rubella HOM05D001967 ORTHO05D001929 1.0e-10 70.5 77 46.8
Sed0008334 Sechium edule HOM05D001967 ORTHO05D001929 1.0e-10 70.5 75 53.3
Sc13g0010980 Simmondsia chinensis HOM05D001967 ORTHO05D001929 1.0e-10 70.5 41 80.5
AT5G16660 Arabidopsis thaliana HOM05D001967 ORTHO05D001929 1.3e-10 70.1 84 41.7
ClCG09G017260 Citrullus lanatus HOM05D001967 ORTHO05D001929 1.3e-10 70.1 75 52.0
DCAR_009026 Daucus carota HOM05D001967 ORTHO05D001929 1.3e-10 70.1 60 56.7
FvH4_7g34210 Fragaria vesca HOM05D001967 ORTHO05D001929 1.3e-10 70.1 57 59.6
FAN03G1573 Fragaria x ananassa HOM05D001967 ORTHO05D001929 1.3e-10 70.1 57 59.6
FAN10G2385 Fragaria x ananassa HOM05D001967 ORTHO05D001929 1.3e-10 70.1 57 59.6
Gorai.013G184100 Gossypium raimondii HOM05D001967 ORTHO05D001929 1.3e-10 70.1 60 63.3
RcHm_v2.0_Chr1g0384571 Rosa chinensis HOM05D001967 ORTHO05D001929 1.3e-10 70.1 51 64.7
HanXRQChr16g0512721 Helianthus annuus HOM05D001967 ORTHO05D001929 1.7e-10 69.7 60 58.3
Lsat_1_v5_gn_9_47781 Lactuca sativa HOM05D001967 ORTHO05D001929 1.7e-10 69.7 64 57.8
CARHR196530 Cardamine hirsuta HOM05D001967 ORTHO05D001929 2.3e-10 69.3 77 45.5
Glyma.11G008700 Glycine max HOM05D001967 ORTHO05D001929 3.0e-10 68.9 62 61.3
Gohir.A02G126500 Gossypium hirsutum HOM05D001967 ORTHO05D001929 3.0e-10 68.9 83 49.4
EL10Ac3g05046 Beta vulgaris HOM05D001967 ORTHO05D001929 3.9e-10 68.6 59 59.3
MELO3C021897.2 Cucumis melo HOM05D001967 ORTHO05D001929 3.9e-10 68.6 75 50.7
CsaV3_2G014040 Cucumis sativus L. HOM05D001967 ORTHO05D001929 3.9e-10 68.6 78 48.7
Duzib128G1086 Durio zibethinus HOM05D001967 ORTHO05D001929 3.9e-10 68.6 83 48.2
Gohir.D13G162100 Gossypium hirsutum HOM05D001967 ORTHO05D001929 3.9e-10 68.6 60 63.3
Hma1.2p1_0419F.1_g149490 Hydrangea macrophylla HOM05D001967 ORTHO05D001929 3.9e-10 68.6 60 61.7
Sp3g01950 Schrenkiella parvula HOM05D001967 ORTHO05D001929 3.9e-10 68.6 85 48.2
Carub.0003s0202 Capsella rubella HOM05D001967 ORTHO05D001929 5.1e-10 68.2 45 68.9
Duzib128G1144 Durio zibethinus HOM05D001967 ORTHO05D001929 5.1e-10 68.2 55 61.8
Cc02_g00130 Coffea canephora HOM05D001967 ORTHO05D001929 6.6e-10 67.8 60 58.3
Manes.08G161240 Manihot esculenta HOM05D001967 ORTHO05D001929 6.6e-10 67.8 47 72.3
Manes.09G129400 Manihot esculenta HOM05D001967 ORTHO05D001929 6.6e-10 67.8 87 48.3
CsaV3_2G036670 Cucumis sativus L. HOM05D001967 ORTHO05D001929 8.6e-10 67.4 78 48.7
Phvul.002G041600 Phaseolus vulgaris HOM05D001967 ORTHO05D001929 8.6e-10 67.4 89 49.4
Lalb_Chr05g0211201 Lupinus albus HOM05D001967 ORTHO05D001929 1.1e-09 67.0 86 45.3
Actinidia33798 Actinidia chinensis HOM05D001967 ORTHO05D001929 1.5e-09 66.6 82 48.8
BcaB08g36830 Brassica carinata HOM05D001967 ORTHO05D001929 1.5e-09 66.6 79 46.8
A10p22550 Brassica napus HOM05D001967 ORTHO05D001929 1.9e-09 66.2 86 47.7
Sed0025867 Sechium edule HOM05D001967 ORTHO05D001929 2.5e-09 65.9 75 49.3
C03p09100 Brassica napus HOM05D000175 ORTHO05D003181 3.3e-09 65.5 78 48.7
BraA10t44317Z Brassica rapa HOM05D001967 ORTHO05D001929 3.3e-09 65.5 86 46.5
Prupe.2G328900 Prunus persica HOM05D001967 ORTHO05D001929 3.3e-09 65.5 51 56.9
ATR0049G035 Amborella trichopoda HOM05D001967 ORTHO05D001929 4.3e-09 65.1 64 56.2
AT3G02900 Arabidopsis thaliana HOM05D001967 ORTHO05D001929 4.3e-09 65.1 44 70.5
Thhalv10014871m.g Eutrema salsugineum HOM05D001967 ORTHO05D001929 4.3e-09 65.1 46 65.2
Solyc03g097250.4 Solanum lycopersicum HOM05D001967 ORTHO05D001929 4.3e-09 65.1 47 72.3
Sopen03g028000 Solanum pennellii HOM05D001967 ORTHO05D001929 4.3e-09 65.1 47 72.3
PGSC0003DMG400026488 Solanum tuberosum HOM05D001967 ORTHO05D001929 4.3e-09 65.1 47 72.3
BraA03t10114Z Brassica rapa HOM05D001967 ORTHO05D001929 7.3e-09 64.3 47 63.8
Hund09809 Selenicereus undatus HOM05D001967 ORTHO05D001929 7.3e-09 64.3 47 68.1
THA.LOC104820904 Tarenaya hassleriana HOM05D001967 ORTHO05D001929 7.3e-09 64.3 91 45.1
arahy.Tifrunner.gnm1.ann1.A9GYM3 Arachis hypogaea HOM05D001967 ORTHO05D001929 9.5e-09 63.9 43 69.8
arahy.Tifrunner.gnm1.ann1.BYM2EW Arachis hypogaea HOM05D001967 ORTHO05D001929 9.5e-09 63.9 43 69.8
Psat0s2012g0080 Pisum sativum HOM05D001967 ORTHO05D001929 9.5e-09 63.9 83 50.6
Dinv17245 Davidia involucrata HOM05D001967 ORTHO05D001929 1.2e-08 63.5 87 46.0
FAN01G1266 Fragaria x ananassa HOM05D001967 ORTHO05D001929 1.2e-08 63.5 63 54.0
Peaxi162Scf00133g00525 Petunia axillaris HOM05D001967 ORTHO05D001929 1.6e-08 63.2 61 57.4
SMO361G0346 Selaginella moellendorffii HOM05D001967 ORTHO05D001929 1.6e-08 63.2 97 39.2
AL3G12340 Arabidopsis lyrata HOM05D001967 ORTHO05D001929 2.1e-08 62.8 44 68.2
ECA232G3630 Erigeron canadensis HOM05D001967 ORTHO05D001929 2.1e-08 62.8 64 53.1
Cpa.g.sc43.127 Carica papaya HOM05D001967 ORTHO05D001929 2.8e-08 62.4 38 81.6
Nitab4.5_0000021g0830 Nicotiana tabacum HOM05D001967 ORTHO05D001929 2.8e-08 62.4 47 70.2
AUR62028208 Chenopodium quinoa HOM05D001967 ORTHO05D001929 4.7e-08 61.6 39 71.8
PGR042G0812 Punica granatum HOM05D001967 ORTHO05D001929 4.7e-08 61.6 61 54.1
SalBow2G3444 Salvia bowleyana HOM05D001967 ORTHO05D001929 4.7e-08 61.6 86 43.0
Aa31LG11G12920 Aethionema arabicum HOM05D001967 ORTHO05D001929 6.2e-08 61.2 123 37.4
A03p07900 Brassica napus HOM05D000175 ORTHO05D003181 6.2e-08 61.2 45 64.4
Pp3c22_20660 Physcomitrium patens HOM05D001967 ORTHO05D001929 6.2e-08 61.2 43 65.1
AL6G27670 Arabidopsis lyrata HOM05D001967 ORTHO05D001929 8.1e-08 60.8 85 42.4
unitig_736.g22837 Utricularia gibba HOM05D001967 ORTHO05D001929 1.1e-07 60.5 70 50.0
Lj3A884G47 Lonicera japonica HOM05D001967 ORTHO05D001929 1.4e-07 60.1 60 50.0
SMO361G0798 Selaginella moellendorffii HOM05D001967 ORTHO05D001929 1.4e-07 60.1 62 48.4
TPR.G37921 Trifolium pratense HOM05D001967 ORTHO05D001929 1.4e-07 60.1 43 67.4
Rhsim03G0224100 Rhododendron simsii HOM05D001967 ORTHO05D001929 1.8e-07 59.7 83 41.0
VMungo1215G2959 Vigna mungo HOM05D001967 ORTHO05D001929 1.8e-07 59.7 88 44.3
Migut.F00932 Erythranthe guttata HOM05D001967 ORTHO05D001929 2.3e-07 59.3 50 58.0
CiPaw.05G213200 Carya illinoinensis HOM05D001967 ORTHO05D001929 4.0e-07 58.5 97 40.2
Sabra13G0067100 Salix brachista HOM05D001967 ORTHO05D001929 4.0e-07 58.5 66 50.0
Os12g0583400 Oryza sativa ssp. japonica HOM05D001967 ORTHO05D001929 5.2e-07 58.2 66 43.9
MSTRG.8557 Avicennia marina HOM05D001967 ORTHO05D001929 6.8e-07 57.8 86 41.9
Oeu046978.1 Olea europaea HOM05D001967 ORTHO05D001929 1.2e-06 57.0 32 81.2
arahy.Tifrunner.gnm1.ann1.5UU89E Arachis hypogaea HOM05D001967 ORTHO05D001929 1.5e-06 56.6 62 53.2
vmacro06374 Vaccinium macrocarpon HOM05D001967 ORTHO05D001929 1.5e-06 56.6 80 42.5
arahy.Tifrunner.gnm1.ann1.VDK392 Arachis hypogaea HOM05D001967 ORTHO05D001929 2.0e-06 56.2 43 65.1
CiPaw.06G035900 Carya illinoinensis HOM05D001967 ORTHO05D001929 2.6e-06 55.8 70 42.9
Mapoly0007s0082 Marchantia polymorpha HOM05D001967 ORTHO05D001929 2.6e-06 55.8 39 64.1
BolC9t58879H Brassica oleracea HOM05D001967 ORTHO05D001929 3.4e-06 55.5 89 39.3
Gorai.003G057200 Gossypium raimondii HOM05D001967 ORTHO05D001929 3.4e-06 55.5 81 45.7
HPP92_002588 Vanilla planifolia HOM05D001967 ORTHO05D001929 9.9e-06 53.9 56 44.6


User provided reference genes

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