Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0643 Ceratophyllum demersum HOM05D038938 ORTHO05D008690 0.0e+00 1307.4 670 100.0
CDE12G0741 Ceratophyllum demersum HOM05D038938 ORTHO05D008690 6.9e-234 814.3 426 95.5
CDE04G0855 Ceratophyllum demersum HOM05D038938 ORTHO05D008690 9.4e-199 697.6 434 82.7
MBI04_g37591_MAGBIO Magnolia biondii HOM05D007929 ORTHO05D008690 1.4e-29 135.6 782 27.4
Dinv21608 Davidia involucrata HOM05D007929 ORTHO05D008690 7.3e-26 123.2 705 26.8
Nn1g01073 Nelumbo nucifera HOM05D007929 ORTHO05D008690 5.8e-23 113.6 743 26.1
Nn6g34027 Nelumbo nucifera HOM05D007929 ORTHO05D008690 6.0e-20 103.6 752 25.1
TAR374G1634 Trochodendron aralioides HOM05D007929 ORTHO05D008690 6.0e-20 103.6 752 26.2
Dinv39112 Davidia involucrata HOM05D007929 ORTHO05D008690 3.3e-18 97.8 698 26.2
Duzib084G1023 Durio zibethinus HOM05D007929 ORTHO05D008690 6.2e-17 93.6 729 25.4
TAR375G1016 Trochodendron aralioides HOM05D007929 ORTHO05D008690 4.0e-16 90.9 317 32.8
Gohir.D08G189300 Gossypium hirsutum HOM05D007929 ORTHO05D008690 1.2e-15 89.4 727 24.6
Gorai.004G199400 Gossypium raimondii HOM05D007929 ORTHO05D008690 1.2e-15 89.4 727 24.8
Hund14599 Selenicereus undatus HOM05D007929 ORTHO05D008690 7.6e-15 86.7 695 24.9
COL.COLO4_37202 Corchorus olitorius HOM05D007929 ORTHO05D008690 9.9e-15 86.3 708 25.1
Manes.02G036501 Manihot esculenta HOM05D007929 ORTHO05D008690 2.2e-14 85.1 694 25.6
QL12p013187 Quercus lobata HOM05D007929 ORTHO05D008690 2.2e-14 85.1 718 23.8
Thecc.03G256000 Theobroma cacao HOM05D007929 ORTHO05D008690 3.8e-14 84.3 718 25.5
Manes.01G077200 Manihot esculenta HOM05D007929 ORTHO05D008690 6.4e-14 83.6 716 24.9
TWI60G0818 Tripterygium wilfordii HOM05D007929 ORTHO05D008690 6.4e-14 83.6 695 24.5
Gohir.A08G171000 Gossypium hirsutum HOM05D007929 ORTHO05D008690 2.1e-12 78.6 723 23.7
Gohir.A12G219000 Gossypium hirsutum HOM05D007929 ORTHO05D008690 4.6e-12 77.4 732 21.7
Gorai.008G237100 Gossypium raimondii HOM05D007929 ORTHO05D008690 7.9e-12 76.6 721 22.2
Potri.001G121200 Populus trichocarpa HOM05D007929 ORTHO05D008690 3.0e-11 74.7 756 23.7
Ciclev10019204m.g Citrus clementina HOM05D007929 ORTHO05D008690 3.9e-11 74.3 227 33.9
Actinidia05192 Actinidia chinensis HOM05D007929 ORTHO05D008690 1.9e-10 72.0 696 25.4
EL10Ac6g14955 Beta vulgaris HOM05D001536 ORTHO05D001442 1.9e-10 72.0 366 26.0
Nn4g23320 Nelumbo nucifera HOM05D001536 ORTHO05D001442 1.9e-10 72.0 225 32.0
Duzib248G0148 Durio zibethinus HOM05D001536 ORTHO05D001442 2.5e-10 71.6 145 38.6
Duzib205G1039 Durio zibethinus HOM05D007929 ORTHO05D008690 4.3e-10 70.9 729 24.1
AUR62003138 Chenopodium quinoa HOM05D001536 ORTHO05D001442 9.6e-10 69.7 162 35.2
AUR62007958 Chenopodium quinoa HOM05D001536 ORTHO05D001442 1.3e-09 69.3 198 30.8
CDE07G1318 Ceratophyllum demersum HOM05D001536 ORTHO05D001442 1.6e-09 68.9 278 27.3
Ciclev10030574m.g Citrus clementina HOM05D001536 ORTHO05D001442 2.1e-09 68.6 155 37.4
Cfa008911 Carpinus fangiana HOM05D001536 ORTHO05D001442 4.8e-09 67.4 149 36.2
Duzib251G0780 Durio zibethinus HOM05D001536 ORTHO05D001442 4.8e-09 67.4 293 30.4
Nn3g17370 Nelumbo nucifera HOM05D001536 ORTHO05D001442 4.8e-09 67.4 229 28.8
TAR629G1896 Trochodendron aralioides HOM05D001536 ORTHO05D001442 4.8e-09 67.4 144 35.4
CDE04G1433 Ceratophyllum demersum HOM05D001536 ORTHO05D001442 6.2e-09 67.0 454 25.3
AUR62007484 Chenopodium quinoa HOM05D007929 ORTHO05D008690 6.2e-09 67.0 695 22.2
MBI19_g16681_MAGBIO Magnolia biondii HOM05D001536 ORTHO05D001442 6.2e-09 67.0 150 35.3
Sabra01G0093400 Salix brachista HOM05D007929 ORTHO05D008690 6.2e-09 67.0 730 23.6
PSO478G3501 Papaver somniferum HOM05D001536 ORTHO05D001442 8.2e-09 66.6 159 34.6
GSVIVG01012173001 Vitis vinifera HOM05D001536 ORTHO05D001442 8.2e-09 66.6 153 36.6
TWI31G0752 Tripterygium wilfordii HOM05D001536 ORTHO05D001442 1.1e-08 66.2 150 35.3
PSO017G3159 Papaver somniferum HOM05D001536 ORTHO05D001442 1.4e-08 65.9 428 26.6
Potri.003G112000 Populus trichocarpa HOM05D007929 ORTHO05D008690 1.8e-08 65.5 711 24.1
Thecc.02G336800 Theobroma cacao HOM05D001536 ORTHO05D001442 1.8e-08 65.5 145 35.9
GSVIVG01004789001 Vitis vinifera HOM05D007929 ORTHO05D008690 1.8e-08 65.5 676 24.1
HPP92_001620 Vanilla planifolia HOM05D001536 ORTHO05D001442 3.1e-08 64.7 251 27.5
Hund25198 Selenicereus undatus HOM05D001536 ORTHO05D001442 4.0e-08 64.3 183 35.5
Sc04g0007760 Simmondsia chinensis HOM05D001536 ORTHO05D001442 4.0e-08 64.3 169 34.3
Atru.chr11.1694 Acer truncatum HOM05D001536 ORTHO05D001442 5.3e-08 63.9 152 34.9
Duzib268G0567 Durio zibethinus HOM05D001536 ORTHO05D001442 5.3e-08 63.9 145 35.9
Sabra10G0123100 Salix brachista HOM05D001536 ORTHO05D001442 5.3e-08 63.9 150 35.3
vmacro17582 Vaccinium macrocarpon HOM05D001536 ORTHO05D001442 5.3e-08 63.9 128 34.4
Manes.01G030700 Manihot esculenta HOM05D001536 ORTHO05D001442 6.9e-08 63.5 145 36.6
RcHm_v2.0_Chr2g0166861 Rosa chinensis HOM05D001536 ORTHO05D001442 6.9e-08 63.5 130 37.7
TWI75G0091 Tripterygium wilfordii HOM05D001536 ORTHO05D001442 6.9e-08 63.5 151 35.8
Haze_11937 Corylus avellana HOM05D001536 ORTHO05D001442 9.0e-08 63.2 150 37.3
Hund05858 Selenicereus undatus HOM05D001536 ORTHO05D001442 9.0e-08 63.2 178 33.7
TWI79G1594 Tripterygium wilfordii HOM05D001536 ORTHO05D001442 9.0e-08 63.2 151 36.4
CSS0031318 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.2e-07 62.8 174 31.0
CSS0031748 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.2e-07 62.8 174 31.0
CiPaw.12G107500 Carya illinoinensis HOM05D007929 ORTHO05D008690 1.2e-07 62.8 718 23.1
Manes.05G107500 Manihot esculenta HOM05D001536 ORTHO05D001442 1.2e-07 62.8 154 33.8
Peaxi162Scf00364g00128 Petunia axillaris HOM05D001536 ORTHO05D001442 1.2e-07 62.8 147 31.3
RcHm_v2.0_Chr7g0202661 Rosa chinensis HOM05D007929 ORTHO05D008690 1.2e-07 62.8 61 50.8
TAR371G0889 Trochodendron aralioides HOM05D001536 ORTHO05D001442 1.2e-07 62.8 153 33.3
Duzib068G0525 Durio zibethinus HOM05D007929 ORTHO05D008690 1.5e-07 62.4 723 22.8
Gohir.A12G162600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 1.5e-07 62.4 145 35.2
Gorai.008G178300 Gossypium raimondii HOM05D001536 ORTHO05D001442 1.5e-07 62.4 145 35.2
Potri.010G162000 Populus trichocarpa HOM05D001536 ORTHO05D001442 1.5e-07 62.4 155 34.8
THA.LOC104822901 Tarenaya hassleriana HOM05D001536 ORTHO05D001442 1.5e-07 62.4 125 33.6
CSS0049375 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 2.0e-07 62.0 147 32.0
Dinv34112 Davidia involucrata HOM05D001536 ORTHO05D001442 2.0e-07 62.0 176 30.7
Eucgr.G02465 Eucalyptus grandis HOM05D001536 ORTHO05D001442 2.0e-07 62.0 166 33.7
Rhsim07G0105500 Rhododendron simsii HOM05D007929 ORTHO05D008690 2.0e-07 62.0 144 36.1
Lsat_1_v5_gn_3_56361 Lactuca sativa HOM05D001536 ORTHO05D001442 2.6e-07 61.6 146 34.9
Lj2g0017216 Lotus japonicus HOM05D001536 ORTHO05D001442 2.6e-07 61.6 178 33.7
Potri.008G092800 Populus trichocarpa HOM05D001536 ORTHO05D001442 2.6e-07 61.6 150 34.7
COL.COLO4_27938 Corchorus olitorius HOM05D001536 ORTHO05D001442 3.4e-07 61.2 145 35.2
FAN17G0931 Fragaria x ananassa HOM05D001536 ORTHO05D001442 3.4e-07 61.2 262 30.2
Lalb_Chr07g0178221 Lupinus albus HOM05D001536 ORTHO05D001442 3.4e-07 61.2 151 34.4
Psat7g134840 Pisum sativum HOM05D001536 ORTHO05D001442 3.4e-07 61.2 256 28.9
QL03p070806 Quercus lobata HOM05D001536 ORTHO05D001442 3.4e-07 61.2 145 35.9
Gorai.009G325900 Gossypium raimondii HOM05D001536 ORTHO05D001442 4.5e-07 60.8 233 28.3
Hma1.2p1_0354F.1_g133660 Hydrangea macrophylla HOM05D001536 ORTHO05D001442 4.5e-07 60.8 150 30.0
Lj2A212T45 Lonicera japonica HOM05D007929 ORTHO05D008690 4.5e-07 60.8 53 56.6
Aqoxy3G03549 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 5.8e-07 60.5 185 30.3
arahy.Tifrunner.gnm1.ann1.I4K7T0 Arachis hypogaea HOM05D001536 ORTHO05D001442 5.8e-07 60.5 148 36.5
arahy.Tifrunner.gnm1.ann1.PU8JJL Arachis hypogaea HOM05D001536 ORTHO05D001442 5.8e-07 60.5 148 36.5
Gohir.D05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 5.8e-07 60.5 233 28.3
TAR374G1508 Trochodendron aralioides HOM05D001536 ORTHO05D001442 5.8e-07 60.5 164 29.3
VMungo1215G2164 Vigna mungo HOM05D001536 ORTHO05D001442 5.8e-07 60.5 209 29.2
Gohir.A05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 7.6e-07 60.1 173 33.5
CSS0003937 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.0e-06 59.7 143 32.2
Rhsim08G0149900 Rhododendron simsii HOM05D001536 ORTHO05D001442 1.0e-06 59.7 127 31.5
vmacro16367 Vaccinium macrocarpon HOM05D001536 ORTHO05D001442 1.0e-06 59.7 131 35.9
Haze_07670 Corylus avellana HOM05D001536 ORTHO05D001442 1.3e-06 59.3 155 29.7
FvH4_5g00200 Fragaria vesca HOM05D007929 ORTHO05D008690 1.3e-06 59.3 61 45.9
FAN18G3609 Fragaria x ananassa HOM05D007929 ORTHO05D008690 1.3e-06 59.3 61 45.9
AL1G39110 Arabidopsis lyrata HOM05D001536 ORTHO05D001442 1.7e-06 58.9 138 33.3
Gohir.D12G165600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 1.7e-06 58.9 145 34.5
PGSC0003DMG401028385 Solanum tuberosum HOM05D001536 ORTHO05D001442 1.7e-06 58.9 224 26.3
CDE04G1089 Ceratophyllum demersum HOM05D001536 ORTHO05D001442 2.2e-06 58.5 148 31.8
FAN02G2125 Fragaria x ananassa HOM05D001536 ORTHO05D001442 2.2e-06 58.5 137 34.3
Oeu016756.1 Olea europaea HOM05D001536 ORTHO05D001442 2.2e-06 58.5 205 29.8
Oeu029333.1 Olea europaea HOM05D007929 ORTHO05D008690 2.2e-06 58.5 48 62.5
Aqoxy3G00455 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 2.9e-06 58.2 280 28.2
FvH4_4g30520 Fragaria vesca HOM05D001536 ORTHO05D001442 2.9e-06 58.2 262 29.8
FAN12G2957 Fragaria x ananassa HOM05D001536 ORTHO05D001442 2.9e-06 58.2 262 29.8
Nitab4.5_0000334g0200 Nicotiana tabacum HOM05D001536 ORTHO05D001442 2.9e-06 58.2 160 31.2
Sabra08G0069600 Salix brachista HOM05D001536 ORTHO05D001442 2.9e-06 58.2 150 34.0
SalBow8G2082 Salvia bowleyana HOM05D001536 ORTHO05D001442 2.9e-06 58.2 154 31.2
SEGI_07957 Sequoiadendron giganteum HOM05D001536 ORTHO05D001442 2.9e-06 58.2 47 59.6
SEGI_16187 Sequoiadendron giganteum HOM05D001536 ORTHO05D001442 2.9e-06 58.2 75 46.7
Sc11g0002250 Simmondsia chinensis HOM05D001536 ORTHO05D001442 2.9e-06 58.2 174 34.5
Cpa.g.sc1.82 Carica papaya HOM05D001536 ORTHO05D001442 3.8e-06 57.8 58 53.4
Migut.L01226 Erythranthe guttata HOM05D001536 ORTHO05D001442 3.8e-06 57.8 130 34.6
FAN08G2103 Fragaria x ananassa HOM05D007929 ORTHO05D008690 3.8e-06 57.8 61 44.3
Glyma.04G165100 Glycine max HOM05D001536 ORTHO05D001442 3.8e-06 57.8 137 35.0
Lalb_Chr10g0098571 Lupinus albus HOM05D001536 ORTHO05D001442 3.8e-06 57.8 230 31.3
MD14G1206400 Malus domestica HOM05D001536 ORTHO05D001442 3.8e-06 57.8 154 32.5
Eucgr.E00452 Eucalyptus grandis HOM05D007929 ORTHO05D008690 4.9e-06 57.4 294 25.9
MD06G1062900 Malus domestica HOM05D007929 ORTHO05D008690 4.9e-06 57.4 123 38.2
Prupe.1G281700 Prunus persica HOM05D001536 ORTHO05D001442 4.9e-06 57.4 74 44.6
Prupe.5G074300 Prunus persica HOM05D007929 ORTHO05D008690 4.9e-06 57.4 716 24.0
CSS0012767 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 6.5e-06 57.0 166 30.1
CAN.G1340.15 Capsicum annuum HOM05D001536 ORTHO05D001442 6.5e-06 57.0 226 27.4
ECA246G1273 Erigeron canadensis HOM05D001536 ORTHO05D001442 6.5e-06 57.0 141 34.0
FvH4_6g47740 Fragaria vesca HOM05D001536 ORTHO05D001442 6.5e-06 57.0 165 33.3
FAN14G2903 Fragaria x ananassa HOM05D001536 ORTHO05D001442 6.5e-06 57.0 165 33.3
Glyma.02G113300 Glycine max HOM05D001536 ORTHO05D001442 6.5e-06 57.0 224 27.2
Nitab4.5_0000520g0040 Nicotiana tabacum HOM05D001536 ORTHO05D001442 6.5e-06 57.0 146 30.8
Phvul.002G069600 Phaseolus vulgaris HOM05D001536 ORTHO05D001442 6.5e-06 57.0 147 34.7
FAN05G3557 Fragaria x ananassa HOM05D001536 ORTHO05D001442 8.4e-06 56.6 165 33.3
Hma1.2p1_1720F.1_g299300 Hydrangea macrophylla HOM05D007929 ORTHO05D008690 8.4e-06 56.6 148 31.8
Lj4g0023409 Lotus japonicus HOM05D001536 ORTHO05D001442 8.4e-06 56.6 148 31.8
Lalb_Chr17g0340961 Lupinus albus HOM05D001536 ORTHO05D001442 8.4e-06 56.6 127 36.2
VMungo1309G1429 Vigna mungo HOM05D001536 ORTHO05D001442 8.4e-06 56.6 143 32.9


User provided reference genes

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