Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0642 Ceratophyllum demersum HOM05D007506 ORTHO05D008409 1.2e-44 183.0 106 100.0
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 1.6e-12 76.3 86 62.8
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 3.1e-11 72.0 89 50.6
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 2.6e-10 68.9 81 60.5
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 3.4e-10 68.6 89 52.8
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 5.8e-10 67.8 83 59.0
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 7.6e-10 67.4 85 63.5
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 7.6e-10 67.4 64 68.8
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 7.6e-10 67.4 79 62.0
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 1.9e-08 62.8 58 58.6
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 1.9e-08 62.8 69 47.8
Sc20g0001140 Simmondsia chinensis HOM05D007506 ORTHO05D008409 1.9e-08 62.8 61 72.1
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 2.4e-08 62.4 63 54.0
QL04p046828 Quercus lobata HOM05D007506 ORTHO05D008409 3.2e-08 62.0 81 61.7
Aqoxy7G00781 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 4.1e-08 61.6 51 58.8
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 4.1e-08 61.6 71 64.8
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 5.4e-08 61.2 52 65.4
PSO801G0534 Papaver somniferum HOM05D007506 ORTHO05D008409 1.2e-07 60.1 60 53.3
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 2.1e-07 59.3 57 57.9
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 2.1e-07 59.3 55 61.8
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 2.1e-07 59.3 61 54.1
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 2.7e-07 58.9 55 56.4
FvH4_7g05151 Fragaria vesca HOM05D007506 ORTHO05D008409 3.5e-07 58.5 58 48.3
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 3.5e-07 58.5 82 58.5
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 4.6e-07 58.2 64 65.6
TWI38G1985 Tripterygium wilfordii HOM05D007506 ORTHO05D008409 6.0e-07 57.8 86 53.5
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 7.8e-07 57.4 39 69.2
Zm00001eb242800 Zea mays HOM05D007506 ORTHO05D008409 7.8e-07 57.4 53 62.3
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 1.0e-06 57.0 62 56.5
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 1.0e-06 57.0 88 61.4
HPP92_013812 Vanilla planifolia HOM05D007506 ORTHO05D008409 1.0e-06 57.0 32 81.2
Aqoxy7G00782 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 1.3e-06 56.6 87 54.0
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 1.3e-06 56.6 90 52.2
PSO339G4482 Papaver somniferum HOM05D007506 ORTHO05D008409 1.3e-06 56.6 60 50.0
Solyc11g006750.1 Solanum lycopersicum HOM05D007506 ORTHO05D008409 1.3e-06 56.6 57 56.1
CDE07G1652 Ceratophyllum demersum HOM05D057737 ORTHO05D008409 1.7e-06 56.2 82 41.5
FAN05G5073 Fragaria x ananassa HOM05D007506 ORTHO05D008409 1.7e-06 56.2 60 45.0
FAN08G2571 Fragaria x ananassa HOM05D007506 ORTHO05D008409 1.7e-06 56.2 38 63.2
FAN28G2052 Fragaria x ananassa HOM05D007506 ORTHO05D008409 1.7e-06 56.2 38 63.2
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 1.7e-06 56.2 58 51.7
CiPaw.13G041100 Carya illinoinensis HOM05D007506 ORTHO05D008409 2.3e-06 55.8 37 73.0
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 2.3e-06 55.8 56 51.8
Os02g0533800 Oryza sativa ssp. japonica HOM05D007506 ORTHO05D008409 3.0e-06 55.5 40 72.5
ClCG08G008330 Citrullus lanatus HOM05D007506 ORTHO05D008409 5.1e-06 54.7 35 71.4
MELO3C019903.2 Cucumis melo HOM05D007506 ORTHO05D008409 5.1e-06 54.7 35 71.4
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 6.6e-06 54.3 80 57.5
MD07G1070900 Malus domestica HOM05D007506 ORTHO05D008409 6.6e-06 54.3 69 62.3
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 6.6e-06 54.3 68 58.8
PGSC0003DMG400023979 Solanum tuberosum HOM05D007506 ORTHO05D008409 6.6e-06 54.3 57 54.4
Nitab4.5_0005214g0030 Nicotiana tabacum HOM05D007506 ORTHO05D008409 8.6e-06 53.9 31 74.2
Nitab4.5_0010633g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 8.6e-06 53.9 31 74.2


User provided reference genes

Program Settings