Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0613 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 1.4e-66 256.1 131 100.0
Aqoxy2G04113 Aquilegia oxysepala HOM05D005971 ORTHO05D007459 3.3e-23 112.1 103 51.5
TAR626G0017 Trochodendron aralioides HOM05D005971 ORTHO05D007459 1.6e-22 109.8 103 49.5
Nn7g37821 Nelumbo nucifera HOM05D005971 ORTHO05D007459 1.4e-21 106.7 103 49.5
PSO675G3107 Papaver somniferum HOM05D005971 ORTHO05D007459 4.5e-20 101.7 103 43.7
MBI02_g40085_MAGBIO Magnolia biondii HOM05D005971 ORTHO05D007459 1.3e-19 100.1 98 52.0
PSO017G5934 Papaver somniferum HOM05D005971 ORTHO05D007459 2.2e-19 99.4 103 42.7
CSS0033662 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 1.9e-18 96.3 103 45.6
Ciclev10018677m.g Citrus clementina HOM05D005971 ORTHO05D007459 2.1e-17 92.8 104 45.2
Dinv19623 Davidia involucrata HOM05D005971 ORTHO05D007459 2.1e-17 92.8 99 44.4
QL04p073974 Quercus lobata HOM05D005971 ORTHO05D007459 2.7e-17 92.4 103 43.7
Lj1C905G3 Lonicera japonica HOM05D005971 ORTHO05D007459 1.0e-16 90.5 95 43.2
MD05G1219300 Malus domestica HOM05D005971 ORTHO05D007459 1.0e-16 90.5 103 44.7
AUR62038398 Chenopodium quinoa HOM05D005971 ORTHO05D007459 1.8e-16 89.7 103 42.7
Sc06g0001560 Simmondsia chinensis HOM05D005971 ORTHO05D007459 1.8e-16 89.7 101 43.6
Migut.M01561 Erythranthe guttata HOM05D005971 ORTHO05D007459 2.3e-16 89.4 99 43.4
EL10Ac2g03354 Beta vulgaris HOM05D005971 ORTHO05D007459 3.0e-16 89.0 103 42.7
Ah.06g185720 Amaranthus hybridus HOM05D005971 ORTHO05D007459 3.9e-16 88.6 95 45.3
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 5.1e-16 88.2 103 44.7
Hma1.2p1_0637F.1_g193590 Hydrangea macrophylla HOM05D005971 ORTHO05D007459 5.1e-16 88.2 101 44.6
Cfa019419 Carpinus fangiana HOM05D005971 ORTHO05D007459 6.7e-16 87.8 103 44.7
Actinidia35435 Actinidia chinensis HOM05D005971 ORTHO05D007459 8.7e-16 87.4 104 44.2
CANSAT80G2256 Cannabis sativa HOM05D005971 ORTHO05D007459 1.1e-15 87.0 96 44.8
Peaxi162Scf00267g01016 Petunia axillaris HOM05D005971 ORTHO05D007459 2.5e-15 85.9 100 42.0
Cc05_g16010 Coffea canephora HOM05D005971 ORTHO05D007459 3.3e-15 85.5 95 40.0
Nitab4.5_0004488g0030 Nicotiana tabacum HOM05D005971 ORTHO05D007459 3.3e-15 85.5 92 43.5
FAN16G0465 Fragaria x ananassa HOM05D005971 ORTHO05D007459 4.3e-15 85.1 95 41.1
PGR031G0315 Punica granatum HOM05D005971 ORTHO05D007459 4.3e-15 85.1 95 40.0
Rhsim04G0005800 Rhododendron simsii HOM05D005971 ORTHO05D007459 7.4e-15 84.3 97 42.3
Sabra16G0310100 Salix brachista HOM05D005971 ORTHO05D007459 7.4e-15 84.3 103 44.7
DCAR_009638 Daucus carota HOM05D005971 ORTHO05D007459 9.6e-15 84.0 100 39.0
SalBow8G3201 Salvia bowleyana HOM05D005971 ORTHO05D007459 9.6e-15 84.0 95 43.2
Potri.001G457550 Populus trichocarpa HOM05D005971 ORTHO05D007459 1.3e-14 83.6 103 43.7
FvH4_3g15860 Fragaria vesca HOM05D005971 ORTHO05D007459 1.6e-14 83.2 95 40.0
FAN11G3334 Fragaria x ananassa HOM05D005971 ORTHO05D007459 1.6e-14 83.2 95 40.0
FAN21G1476 Fragaria x ananassa HOM05D005971 ORTHO05D007459 1.6e-14 83.2 95 40.0
Medtr2g069560 Medicago truncatula HOM05D005971 ORTHO05D007459 2.1e-14 82.8 112 42.0
Solyc10g005600.4 Solanum lycopersicum HOM05D005971 ORTHO05D007459 2.1e-14 82.8 95 41.1
Sopen10g001570 Solanum pennellii HOM05D005971 ORTHO05D007459 2.1e-14 82.8 95 40.0
Cpa.g.sc10.38 Carica papaya HOM05D005971 ORTHO05D007459 2.8e-14 82.4 103 38.8
PGSC0003DMG402011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 2.8e-14 82.4 95 40.0
ClCG11G016380 Citrullus lanatus HOM05D005971 ORTHO05D007459 4.8e-14 81.6 103 37.9
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 1.4e-13 80.1 103 36.9
RcHm_v2.0_Chr5g0026671 Rosa chinensis HOM05D005971 ORTHO05D007459 1.4e-13 80.1 95 38.9
Atru.chr12.2179 Acer truncatum HOM05D005971 ORTHO05D007459 1.8e-13 79.7 103 39.8
Atru.chr12.2184 Acer truncatum HOM05D005971 ORTHO05D007459 1.8e-13 79.7 103 39.8
MELO3C010564.2 Cucumis melo HOM05D005971 ORTHO05D007459 2.4e-13 79.3 103 36.9
Eucgr.F03182 Eucalyptus grandis HOM05D005971 ORTHO05D007459 2.4e-13 79.3 103 35.9
Nitab4.5_0000611g0060 Nicotiana tabacum HOM05D005971 ORTHO05D007459 2.4e-13 79.3 91 40.7
GSVIVG01020430001 Vitis vinifera HOM05D005971 ORTHO05D007459 3.1e-13 79.0 95 37.9
CAN.G492.69 Capsicum annuum HOM05D005971 ORTHO05D007459 4.1e-13 78.6 95 40.0
Duzib268G0338 Durio zibethinus HOM05D005971 ORTHO05D007459 4.1e-13 78.6 103 34.0
TPR.G9756 Trifolium pratense HOM05D005971 ORTHO05D007459 4.1e-13 78.6 94 40.4
HPP92_026348 Vanilla planifolia HOM05D005971 ORTHO05D007459 5.3e-13 78.2 103 38.8
A10p02830 Brassica napus HOM05D005971 ORTHO05D007459 6.9e-13 77.8 96 39.6
C05p02580 Brassica napus HOM05D005971 ORTHO05D007459 6.9e-13 77.8 96 39.6
BolC5t29039H Brassica oleracea HOM05D005971 ORTHO05D007459 6.9e-13 77.8 96 39.6
BraA10t42550Z Brassica rapa HOM05D005971 ORTHO05D007459 6.9e-13 77.8 96 39.6
Ca_03684_v3 Cicer arietinum L. HOM05D005971 ORTHO05D007459 6.9e-13 77.8 104 39.4
Gohir.A13G153066 Gossypium hirsutum HOM05D005971 ORTHO05D007459 6.9e-13 77.8 105 32.4
Gohir.D13G157500 Gossypium hirsutum HOM05D005971 ORTHO05D007459 6.9e-13 77.8 105 32.4
Gorai.013G178300 Gossypium raimondii HOM05D005971 ORTHO05D007459 6.9e-13 77.8 105 32.4
Manes.14G015836 Manihot esculenta HOM05D005971 ORTHO05D007459 6.9e-13 77.8 103 40.8
Sp1g03210 Schrenkiella parvula HOM05D005971 ORTHO05D007459 6.9e-13 77.8 96 39.6
SGA_v2.0_scaffold7G03577 Striga asiatica HOM05D005971 ORTHO05D007459 6.9e-13 77.8 86 40.7
THA.LOC104822751 Tarenaya hassleriana HOM05D005971 ORTHO05D007459 6.9e-13 77.8 95 41.1
CSS0049989 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 9.0e-13 77.4 80 45.0
VMungo1080G1570 Vigna mungo HOM05D005971 ORTHO05D007459 9.0e-13 77.4 102 38.2
Carub.0001s0356 Capsella rubella HOM05D005971 ORTHO05D007459 1.2e-12 77.0 88 42.0
Oeu052011.1 Olea europaea HOM05D005971 ORTHO05D007459 1.2e-12 77.0 93 38.7
Psat1g011400 Pisum sativum HOM05D005971 ORTHO05D007459 1.2e-12 77.0 112 41.1
arahy.Tifrunner.gnm1.ann1.MUD8D6 Arachis hypogaea HOM05D005971 ORTHO05D007459 2.0e-12 76.3 94 41.5
Phvul.005G056400 Phaseolus vulgaris HOM05D005971 ORTHO05D007459 2.0e-12 76.3 102 39.2
AT1G04390 Arabidopsis thaliana HOM05D005971 ORTHO05D007459 2.6e-12 75.9 96 38.5
AL1G14000 Arabidopsis lyrata HOM05D005971 ORTHO05D007459 3.4e-12 75.5 96 38.5
Thhalv10006788m.g Eutrema salsugineum HOM05D005971 ORTHO05D007459 3.4e-12 75.5 96 38.5
vmacro09786 Vaccinium macrocarpon HOM05D005971 ORTHO05D007459 3.4e-12 75.5 96 39.6
GSVIVG01020427001 Vitis vinifera HOM05D005971 ORTHO05D007459 3.4e-12 75.5 94 37.2
CARHR003720 Cardamine hirsuta HOM05D005971 ORTHO05D007459 4.5e-12 75.1 96 38.5
arahy.Tifrunner.gnm1.ann1.Q40ZT9 Arachis hypogaea HOM05D005971 ORTHO05D007459 5.9e-12 74.7 85 43.5
Lj3g0007743 Lotus japonicus HOM05D005971 ORTHO05D007459 7.6e-12 74.3 106 34.9
Aa31LG1G20480 Aethionema arabicum HOM05D005971 ORTHO05D007459 1.7e-11 73.2 96 36.5
ECA240G1928 Erigeron canadensis HOM05D005971 ORTHO05D007459 1.7e-11 73.2 94 41.5
unitig_26.g10082 Utricularia gibba HOM05D005971 ORTHO05D007459 1.7e-11 73.2 83 39.8
Glyma.15G255000 Glycine max HOM05D005971 ORTHO05D007459 2.9e-11 72.4 106 34.9
Lsat_1_v5_gn_7_71401 Lactuca sativa HOM05D005971 ORTHO05D007459 3.8e-11 72.0 99 40.4
ATR0165G004 Amborella trichopoda HOM05D005971 ORTHO05D007459 5.0e-11 71.6 107 35.5
Sed0013026 Sechium edule HOM05D005971 ORTHO05D007459 1.4e-10 70.1 99 34.3
HanXRQChr05g0160991 Helianthus annuus HOM05D005971 ORTHO05D007459 1.9e-10 69.7 90 38.9
Lalb_Chr25g0285011 Lupinus albus HOM05D005971 ORTHO05D007459 1.9e-10 69.7 94 35.1
TWI39G0032 Tripterygium wilfordii HOM05D005971 ORTHO05D007459 9.3e-10 67.4 95 37.9
Peaxi162Scf01123g00003 Petunia axillaris HOM05D005971 ORTHO05D007459 5.7e-07 58.2 78 43.6


User provided reference genes

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