Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 4.0e-176 621.3 311 100.0
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.4e-75 287.3 326 52.8
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 1.0e-54 218.0 323 41.5
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 5.6e-53 212.2 306 40.5
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 1.6e-52 210.7 316 40.5
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.1e-52 210.3 318 40.3
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 2.1e-52 210.3 315 40.3
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 3.6e-52 209.5 314 40.1
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 6.2e-52 208.8 315 41.0
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 3.1e-51 206.5 295 42.4
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 6.8e-51 205.3 307 41.4
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 6.8e-51 205.3 319 39.2
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 8.9e-51 204.9 317 39.4
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 1.5e-50 204.1 318 40.3
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.5e-50 204.1 296 41.9
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.6e-50 203.4 314 39.8
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 2.6e-50 203.4 315 40.0
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 4.4e-50 202.6 317 41.0
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 7.5e-50 201.8 297 41.8
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 9.8e-50 201.4 299 41.5
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 2.9e-49 199.9 291 41.2
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 4.9e-49 199.1 295 41.0
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 6.4e-49 198.7 314 38.9
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 6.4e-49 198.7 316 39.9
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 6.4e-49 198.7 297 40.7
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 8.3e-49 198.4 295 40.7
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 8.3e-49 198.4 295 40.7
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 8.3e-49 198.4 297 40.7
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.1e-48 198.0 299 40.5
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.4e-48 197.6 311 38.9
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.9e-48 197.2 301 40.2
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.9e-48 197.2 291 40.5
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.9e-48 197.2 317 37.2
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 4.1e-48 196.1 313 39.3
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 5.4e-48 195.7 295 40.3
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 7.1e-48 195.3 293 41.3
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 2.1e-47 193.7 297 39.4
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 2.7e-47 193.4 301 39.2
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 3.5e-47 193.0 301 38.5
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 3.5e-47 193.0 315 37.1
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 3.5e-47 193.0 317 38.8
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 4.6e-47 192.6 312 39.4
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 4.6e-47 192.6 320 38.4
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 4.6e-47 192.6 312 37.8
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 6.0e-47 192.2 317 38.2
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.0e-46 191.4 324 38.6
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 3.9e-46 189.5 280 40.7
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 6.6e-46 188.7 313 38.3
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 8.6e-46 188.3 312 37.8
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 1.5e-45 187.6 320 37.8
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 1.9e-45 187.2 316 37.0
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 3.3e-45 186.4 320 36.6
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 5.6e-45 185.7 316 36.7
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 5.6e-45 185.7 326 37.7
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 7.3e-45 185.3 318 36.5
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 9.5e-45 184.9 313 38.0
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 1.2e-44 184.5 318 36.5
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 1.2e-44 184.5 319 37.0
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.2e-44 184.5 298 37.9
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.6e-44 184.1 316 36.4
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.1e-44 183.7 320 36.6
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.8e-44 183.3 320 36.6
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 4.7e-44 182.6 317 36.3
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 6.2e-44 182.2 314 37.3
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 8.1e-44 181.8 299 38.8
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.4e-43 181.0 316 35.8
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 1.8e-43 180.6 319 36.7
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.8e-43 180.6 319 36.7
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.3e-43 180.3 299 38.5
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 5.2e-43 179.1 303 37.3
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.8e-43 178.7 320 36.6
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.8e-43 178.7 320 36.6
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 4.4e-42 176.0 322 35.1
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 9.9e-42 174.9 194 52.6
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 2.2e-41 173.7 307 36.2
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 4.9e-41 172.6 318 34.9
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 6.4e-41 172.2 243 41.2
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 7.1e-40 168.7 284 37.7
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 1.9e-37 160.6 186 49.5
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 5.6e-37 159.1 269 39.4
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.7e-36 156.0 277 37.5
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.4e-35 154.5 182 48.9
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 8.9e-35 151.8 182 47.3
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 8.9e-35 151.8 184 47.3
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 7.6e-34 148.7 185 45.4
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.3e-33 147.9 183 48.1
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 6.4e-33 145.6 202 44.1
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 1.4e-32 144.4 219 41.6
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.6e-31 141.0 319 30.7
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 1.3e-30 137.9 289 31.1
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 8.1e-28 128.6 271 31.4
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 5.3e-27 125.9 95 68.4
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 1.2e-26 124.8 98 66.3
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 2.1e-23 114.0 91 63.7
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.0e-22 111.7 148 45.3
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.9e-22 109.8 241 33.6
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 1.9e-21 107.5 150 42.0
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 6.2e-20 102.4 176 36.9
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 1.5e-18 97.8 138 40.6
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 3.2e-16 90.1 306 23.9
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 2.1e-15 87.4 285 24.6
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 3.5e-15 86.7 149 36.9
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 1.9e-13 80.9 121 41.3
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 2.5e-13 80.5 59 62.7
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 7.4e-13 79.0 59 59.3
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 9.6e-13 78.6 252 23.8
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.3e-12 78.2 61 59.0
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 2.1e-12 77.4 61 59.0
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 5.3e-11 72.8 41 73.2
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 1.4e-08 64.7 41 63.4
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 4.2e-08 63.2 167 29.9
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.2e-07 61.6 44 54.5


User provided reference genes

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