Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0542 Ceratophyllum demersum HOM05D004711 ORTHO05D005594 5.0e-190 667.9 423 100.0
CDE04G1233 Ceratophyllum demersum HOM05D004711 ORTHO05D005594 7.4e-117 424.9 419 74.9
TAR633G0481 Trochodendron aralioides HOM05D004711 ORTHO05D005594 8.2e-23 112.5 332 35.2
Nn2g10244 Nelumbo nucifera HOM05D004711 ORTHO05D005594 4.6e-18 96.7 225 36.9
TAR636G2556 Trochodendron aralioides HOM05D004711 ORTHO05D005594 3.3e-16 90.5 329 32.8
Actinidia32572 Actinidia chinensis HOM05D004711 ORTHO05D005594 1.7e-15 88.2 332 33.4
Duzib268G1837 Durio zibethinus HOM05D004711 ORTHO05D005594 1.2e-13 82.0 233 34.8
Aqoxy4G03297 Aquilegia oxysepala HOM05D004711 ORTHO05D005594 1.5e-13 81.6 144 44.4
Gohir.D02G106500 Gossypium hirsutum HOM05D004711 ORTHO05D005594 2.6e-13 80.9 248 33.9
Hma1.2p1_0537F.1_g174195 Hydrangea macrophylla HOM05D004711 ORTHO05D005594 1.0e-12 79.0 228 40.8
Hund03689 Selenicereus undatus HOM05D004711 ORTHO05D005594 1.7e-12 78.2 339 37.5
Thecc.04G149100 Theobroma cacao HOM05D004711 ORTHO05D005594 3.8e-12 77.0 144 39.6
Duzib151G1091 Durio zibethinus HOM05D004711 ORTHO05D005594 1.9e-11 74.7 327 32.1
Dinv16951 Davidia involucrata HOM05D004711 ORTHO05D005594 9.4e-11 72.4 334 34.7
COL.COLO4_21250 Corchorus olitorius HOM05D004711 ORTHO05D005594 1.2e-10 72.0 220 33.2
Atru.chr8.78 Acer truncatum HOM05D004711 ORTHO05D005594 1.8e-09 68.2 93 47.3
Rhsim05G0232600 Rhododendron simsii HOM05D004711 ORTHO05D005594 3.0e-09 67.4 142 38.7
Gohir.A02G002300 Gossypium hirsutum HOM05D004711 ORTHO05D005594 3.9e-09 67.0 144 36.8
Gohir.D02G002600 Gossypium hirsutum HOM05D004711 ORTHO05D005594 6.7e-09 66.2 144 37.5
Sed0027783 Sechium edule HOM05D004711 ORTHO05D005594 6.7e-09 66.2 241 33.6
TWI74G1298 Tripterygium wilfordii HOM05D004711 ORTHO05D005594 6.7e-09 66.2 142 38.0
GSVIVG01029882001 Vitis vinifera HOM05D004711 ORTHO05D005594 6.7e-09 66.2 111 40.5
QL07p031674 Quercus lobata HOM05D004711 ORTHO05D005594 1.1e-08 65.5 331 36.3
Cc06_g00250 Coffea canephora HOM05D004711 ORTHO05D005594 1.5e-08 65.1 332 34.9
PSO170G0854 Papaver somniferum HOM05D004711 ORTHO05D005594 1.5e-08 65.1 138 38.4
PGR004G0084 Punica granatum HOM05D004711 ORTHO05D005594 2.0e-08 64.7 142 37.3
Actinidia29018 Actinidia chinensis HOM05D004711 ORTHO05D005594 3.3e-08 63.9 413 32.7
BcaC05g29601 Brassica carinata HOM05D004711 ORTHO05D005594 3.3e-08 63.9 135 39.3
C05p59190 Brassica napus HOM05D004711 ORTHO05D005594 3.3e-08 63.9 135 39.3
BolC5t34578H Brassica oleracea HOM05D004711 ORTHO05D005594 4.4e-08 63.5 135 39.3
PSO017G6473 Papaver somniferum HOM05D004711 ORTHO05D005594 4.4e-08 63.5 113 40.7
Sc20g0007170 Simmondsia chinensis HOM05D004711 ORTHO05D005594 4.4e-08 63.5 142 39.4
Nn5g26805 Nelumbo nucifera HOM05D004711 ORTHO05D005594 5.7e-08 63.2 330 36.7
Aa31LG5G18710 Aethionema arabicum HOM05D004711 ORTHO05D005594 7.4e-08 62.8 138 39.1
CSS0008345 Camellia sinensis var. sinensis HOM05D004711 ORTHO05D005594 7.4e-08 62.8 145 37.2
CSS0041259 Camellia sinensis var. sinensis HOM05D004711 ORTHO05D005594 7.4e-08 62.8 343 37.6
Nn1g01604 Nelumbo nucifera HOM05D004711 ORTHO05D005594 7.4e-08 62.8 330 28.2
ClCG04G006250 Citrullus lanatus HOM05D004711 ORTHO05D005594 1.3e-07 62.0 336 35.7
Gorai.005G003100 Gossypium raimondii HOM05D004711 ORTHO05D005594 1.3e-07 62.0 144 36.1
Actinidia11492 Actinidia chinensis HOM05D004711 ORTHO05D005594 2.2e-07 61.2 144 35.4
HPP92_019048 Vanilla planifolia HOM05D004711 ORTHO05D005594 2.2e-07 61.2 250 31.6
Sed0008721 Sechium edule HOM05D004711 ORTHO05D005594 2.8e-07 60.8 242 35.1
Haze_21199 Corylus avellana HOM05D004711 ORTHO05D005594 4.8e-07 60.1 330 35.8
ECA247G0260 Erigeron canadensis HOM05D004711 ORTHO05D005594 4.8e-07 60.1 316 40.5
Gorai.005G121000 Gossypium raimondii HOM05D004711 ORTHO05D005594 4.8e-07 60.1 330 30.3
THA.LOC104823329 Tarenaya hassleriana HOM05D004711 ORTHO05D005594 4.8e-07 60.1 147 39.5
AT3G08670 Arabidopsis thaliana HOM05D004711 ORTHO05D005594 6.3e-07 59.7 133 39.8
PSO339G1855 Papaver somniferum HOM05D004711 ORTHO05D005594 6.3e-07 59.7 328 30.8
EL10Ac7g17131 Beta vulgaris HOM05D004711 ORTHO05D005594 8.2e-07 59.3 109 36.7
Dinv25360 Davidia involucrata HOM05D004711 ORTHO05D005594 8.2e-07 59.3 112 38.4
Potri.006G110700 Populus trichocarpa HOM05D004711 ORTHO05D005594 8.2e-07 59.3 144 36.8
Gohir.A03G087100 Gossypium hirsutum HOM05D004711 ORTHO05D005594 1.1e-06 58.9 112 37.5
THA.LOC104816161 Tarenaya hassleriana HOM05D004711 ORTHO05D005594 1.1e-06 58.9 133 34.6
THA.LOC104816162 Tarenaya hassleriana HOM05D004711 ORTHO05D005594 1.1e-06 58.9 133 34.6
THA.LOC104816163 Tarenaya hassleriana HOM05D004711 ORTHO05D005594 1.1e-06 58.9 133 34.6
Cpa.g.sc72.61 Carica papaya HOM05D004711 ORTHO05D005594 1.8e-06 58.2 199 30.7
Eucgr.K01295 Eucalyptus grandis HOM05D004711 ORTHO05D005594 1.8e-06 58.2 110 37.3
Oeu026938.1 Olea europaea HOM05D004711 ORTHO05D005594 2.4e-06 57.8 331 33.8
Potri.016G139500 Populus trichocarpa HOM05D004711 ORTHO05D005594 3.1e-06 57.4 227 30.8
A05p40110 Brassica napus HOM05D004711 ORTHO05D005594 4.1e-06 57.0 323 34.1
FAN09G1198 Fragaria x ananassa HOM05D004711 ORTHO05D005594 4.1e-06 57.0 144 34.7
Hma1.2p1_2237F.1_g317760 Hydrangea macrophylla HOM05D004711 ORTHO05D005594 4.1e-06 57.0 152 30.9
Lj2C57T4 Lonicera japonica HOM05D004711 ORTHO05D005594 4.1e-06 57.0 326 33.7
RcHm_v2.0_Chr3g0460111 Rosa chinensis HOM05D004711 ORTHO05D005594 4.1e-06 57.0 144 34.7
MSTRG.5483 Avicennia marina HOM05D004711 ORTHO05D005594 7.0e-06 56.2 328 34.1
Manes.08G169400 Manihot esculenta HOM05D004711 ORTHO05D005594 7.0e-06 56.2 328 39.0


User provided reference genes

Program Settings