Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.6e-61 239.2 119 100.0
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 5.4e-49 197.6 107 91.6
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 9.0e-28 127.1 115 60.0
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 1.5e-27 126.3 94 70.2
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 2.0e-27 125.9 79 77.2
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 2.6e-27 125.6 84 75.0
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 2.6e-27 125.6 98 66.3
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 3.4e-27 125.2 94 70.2
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 4.5e-27 124.8 94 69.1
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 4.5e-27 124.8 94 69.1
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 4.5e-27 124.8 94 69.1
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 4.5e-27 124.8 69 87.0
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 7.6e-27 124.0 84 73.8
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 7.6e-27 124.0 91 69.2
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 7.6e-27 124.0 90 67.8
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 7.6e-27 124.0 93 68.8
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 7.6e-27 124.0 87 72.4
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.0e-26 123.6 105 61.9
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.0e-26 123.6 105 61.9
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.0e-26 123.6 113 59.3
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 1.3e-26 123.2 83 75.9
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 1.3e-26 123.2 85 71.8
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 1.3e-26 123.2 86 73.3
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.7e-26 122.9 105 61.0
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.7e-26 122.9 104 62.5
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 1.7e-26 122.9 85 71.8
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 1.7e-26 122.9 83 74.7
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 1.7e-26 122.9 86 72.1
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.7e-26 122.9 91 71.4
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 2.2e-26 122.5 104 62.5
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.2e-26 122.5 104 62.5
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.2e-26 122.5 87 71.3
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 2.9e-26 122.1 69 84.1
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.8e-26 121.7 93 69.9
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 5.0e-26 121.3 76 78.9
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.0e-26 121.3 94 67.0
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 5.0e-26 121.3 84 73.8
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 5.0e-26 121.3 93 66.7
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 6.5e-26 120.9 83 69.9
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 6.5e-26 120.9 109 56.9
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 8.4e-26 120.6 101 64.4
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 8.4e-26 120.6 89 70.8
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 8.4e-26 120.6 104 63.5
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 1.1e-25 120.2 88 67.0
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 1.1e-25 120.2 83 72.3
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 1.1e-25 120.2 110 58.2
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 1.4e-25 119.8 81 74.1
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 1.4e-25 119.8 81 74.1
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 1.4e-25 119.8 89 66.3
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 1.9e-25 119.4 119 55.5
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.9e-25 119.4 94 63.8
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 2.5e-25 119.0 82 70.7
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 2.5e-25 119.0 97 64.9
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.5e-25 119.0 94 63.8
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 4.2e-25 118.2 89 67.4
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 4.2e-25 118.2 96 64.6
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 4.2e-25 118.2 92 68.5
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 4.2e-25 118.2 99 63.6
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 5.5e-25 117.9 99 63.6
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 7.2e-25 117.5 76 77.6
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 7.2e-25 117.5 92 67.4
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 9.3e-25 117.1 88 68.2
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 9.3e-25 117.1 93 64.5
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 9.3e-25 117.1 89 67.4
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 9.3e-25 117.1 116 55.2
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 9.3e-25 117.1 114 57.9
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 1.6e-24 116.3 88 63.6
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.6e-24 116.3 94 62.8
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 2.1e-24 115.9 99 64.6
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 2.7e-24 115.5 117 56.4
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 2.7e-24 115.5 76 72.4
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 2.7e-24 115.5 72 76.4
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 2.7e-24 115.5 99 61.6
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 2.7e-24 115.5 72 76.4
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.7e-24 115.5 65 84.6
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 3.5e-24 115.2 68 80.9
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 3.5e-24 115.2 68 80.9
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 3.5e-24 115.2 68 80.9
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 3.5e-24 115.2 68 80.9
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 3.5e-24 115.2 76 75.0
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 3.5e-24 115.2 92 67.4
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 3.5e-24 115.2 75 76.0
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 4.6e-24 114.8 100 61.0
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 7.9e-24 114.0 93 63.4
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 7.9e-24 114.0 90 68.9
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 7.9e-24 114.0 108 59.3
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.8e-23 112.8 90 67.8
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 3.0e-23 112.1 68 79.4
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 3.0e-23 112.1 108 57.4
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 3.0e-23 112.1 93 61.3
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 3.0e-23 112.1 69 78.3
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 3.9e-23 111.7 107 57.9
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 3.9e-23 111.7 65 81.5
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 3.9e-23 111.7 65 81.5
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 3.9e-23 111.7 65 81.5
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 3.9e-23 111.7 65 81.5
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 3.9e-23 111.7 82 68.3
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 5.1e-23 111.3 105 57.1
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 1.1e-22 110.2 90 64.4
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 1.1e-22 110.2 91 67.0
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.5e-22 109.8 90 66.7
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 1.9e-22 109.4 98 60.2
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 2.5e-22 109.0 85 67.1
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 2.5e-22 109.0 102 59.8
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 3.3e-22 108.6 68 77.9
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 3.3e-22 108.6 93 61.3
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 4.3e-22 108.2 66 77.3
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 5.7e-22 107.8 91 63.7
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 7.4e-22 107.5 105 58.1
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 7.4e-22 107.5 82 64.6
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 7.4e-22 107.5 89 60.7
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 7.4e-22 107.5 65 76.9
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 1.6e-21 106.3 85 64.7
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.6e-21 106.3 92 62.0
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 3.7e-21 105.1 92 58.7
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 4.8e-21 104.8 65 78.5
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 4.8e-21 104.8 74 67.6
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-20 102.8 65 76.9
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.8e-20 102.8 86 60.5
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 4.1e-20 101.7 65 76.9
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 4.1e-20 101.7 111 48.6
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.0e-18 94.7 70 68.6
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 1.1e-17 93.6 68 66.2
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 4.2e-17 91.7 96 54.2
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 4.2e-17 91.7 96 54.2
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 4.2e-17 91.7 96 54.2
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 3.9e-15 85.1 50 80.0
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 5.1e-15 84.7 53 75.5
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 1.1e-14 83.6 60 66.7
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.1e-12 77.0 67 61.2
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 1.4e-12 76.6 48 75.0
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 4.5e-11 71.6 89 52.8
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 8.5e-10 67.4 95 41.1
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.2e-08 63.5 45 64.4
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 1.4e-07 60.1 33 84.8
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 2.3e-07 59.3 68 52.9
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 6.7e-07 57.8 77 45.5
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 1.1e-06 57.0 54 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 2.0e-06 56.2 56 41.1


User provided reference genes

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