Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0481 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 2.5e-83 312.0 148 100.0
CDE04G0076 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 5.0e-68 261.2 142 88.7
CDE10G0971 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 1.4e-30 136.7 143 53.8
CDE10G0994 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 1.9e-30 136.3 143 52.4
MBI05_g19349_MAGBIO Magnolia biondii HOM05D002704 ORTHO05D002891 1.9e-27 126.3 134 48.5
Nn5g30117 Nelumbo nucifera HOM05D002704 ORTHO05D002891 2.5e-27 125.9 143 48.3
Aqoxy6G00791 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 3.6e-26 122.1 129 48.8
Dinv14325 Davidia involucrata HOM05D002704 ORTHO05D002891 3.6e-26 122.1 150 48.7
GSVIVG01009025001 Vitis vinifera HOM05D002704 ORTHO05D002891 4.7e-26 121.7 129 51.9
Thecc.08G107400 Theobroma cacao HOM05D002704 ORTHO05D002891 8.0e-26 120.9 133 51.9
TAR628G0302 Trochodendron aralioides HOM05D002704 ORTHO05D002891 8.0e-26 120.9 133 48.9
Gorai.009G237500 Gossypium raimondii HOM05D002704 ORTHO05D002891 2.3e-25 119.4 152 46.7
Dinv44770 Davidia involucrata HOM05D002704 ORTHO05D002891 3.1e-25 119.0 153 45.8
Gohir.D05G229400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 1.2e-24 117.1 152 46.1
Duzib116G0617 Durio zibethinus HOM05D002704 ORTHO05D002891 1.5e-24 116.7 145 48.3
Gohir.A02G076100 Gossypium hirsutum HOM05D002704 ORTHO05D002891 2.0e-24 116.3 145 44.1
TAR625G1386 Trochodendron aralioides HOM05D002704 ORTHO05D002891 2.6e-24 115.9 133 48.1
Duzib093G0662 Durio zibethinus HOM05D002704 ORTHO05D002891 3.4e-24 115.5 148 45.9
Gorai.005G094000 Gossypium raimondii HOM05D002704 ORTHO05D002891 7.5e-24 114.4 145 44.8
Gohir.A05G226700 Gossypium hirsutum HOM05D002704 ORTHO05D002891 1.7e-23 113.2 140 47.9
QL12p036715 Quercus lobata HOM05D002704 ORTHO05D002891 1.7e-23 113.2 149 45.0
Prupe.1G516300 Prunus persica HOM05D002704 ORTHO05D002891 2.2e-23 112.8 152 46.7
MELO3C003450.2 Cucumis melo HOM05D002704 ORTHO05D002891 2.9e-23 112.5 144 44.4
ClCG11G015290 Citrullus lanatus HOM05D002704 ORTHO05D002891 3.7e-23 112.1 137 45.3
Peaxi162Scf00041g00165 Petunia axillaris HOM05D002704 ORTHO05D002891 3.7e-23 112.1 143 44.1
Sed0020547 Sechium edule HOM05D002704 ORTHO05D002891 3.7e-23 112.1 136 47.1
Sed0023198 Sechium edule HOM05D002704 ORTHO05D002891 3.7e-23 112.1 142 43.7
COL.COLO4_16406 Corchorus olitorius HOM05D002704 ORTHO05D002891 4.9e-23 111.7 153 45.1
Lj4C103T16 Lonicera japonica HOM05D002704 ORTHO05D002891 4.9e-23 111.7 146 45.2
Gohir.D02G083400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 6.4e-23 111.3 148 43.2
Hma1.2p1_0237F.1_g099460 Hydrangea macrophylla HOM05D002704 ORTHO05D002891 6.4e-23 111.3 151 43.0
Atru.chr13.1197 Acer truncatum HOM05D002704 ORTHO05D002891 8.3e-23 110.9 137 47.4
Duzib041G0800 Durio zibethinus HOM05D002704 ORTHO05D002891 8.3e-23 110.9 141 44.7
AUR62038516 Chenopodium quinoa HOM05D002704 ORTHO05D002891 1.4e-22 110.2 141 45.4
Ah.05g170030 Amaranthus hybridus HOM05D002704 ORTHO05D002891 2.4e-22 109.4 148 45.9
CiPaw.08G044800 Carya illinoinensis HOM05D002704 ORTHO05D002891 5.4e-22 108.2 157 41.4
FAN04G1068 Fragaria x ananassa HOM05D002704 ORTHO05D002891 9.2e-22 107.5 139 47.5
FAN08G2281 Fragaria x ananassa HOM05D002704 ORTHO05D002891 9.2e-22 107.5 139 48.2
AUR62027750 Chenopodium quinoa HOM05D002704 ORTHO05D002891 1.2e-21 107.1 141 45.4
Ciclev10002416m.g Citrus clementina HOM05D002704 ORTHO05D002891 1.2e-21 107.1 145 46.2
CsaV3_3G048710 Cucumis sativus L. HOM05D002704 ORTHO05D002891 1.6e-21 106.7 143 42.7
Manes.18G067800 Manihot esculenta HOM05D002704 ORTHO05D002891 1.6e-21 106.7 144 43.8
Hund26960 Selenicereus undatus HOM05D002704 ORTHO05D002891 1.6e-21 106.7 142 46.5
FvH4_5g37370 Fragaria vesca HOM05D002704 ORTHO05D002891 2.1e-21 106.3 139 47.5
FAN13G2774 Fragaria x ananassa HOM05D002704 ORTHO05D002891 2.1e-21 106.3 139 47.5
MD15G1368100 Malus domestica HOM05D002704 ORTHO05D002891 2.1e-21 106.3 145 43.4
Potri.005G165300 Populus trichocarpa HOM05D002704 ORTHO05D002891 4.6e-21 105.1 154 46.8
FAN18G1803 Fragaria x ananassa HOM05D002704 ORTHO05D002891 6.0e-21 104.8 139 46.8
RcHm_v2.0_Chr7g0239041 Rosa chinensis HOM05D002704 ORTHO05D002891 6.0e-21 104.8 145 44.8
TAR381G1126 Trochodendron aralioides HOM05D002704 ORTHO05D002891 6.0e-21 104.8 142 47.2
EL10Ac1g01225 Beta vulgaris HOM05D002704 ORTHO05D002891 7.8e-21 104.4 139 45.3
Nitab4.5_0005777g0010 Nicotiana tabacum HOM05D002704 ORTHO05D002891 7.8e-21 104.4 141 39.7
Cpa.g.sc36.127 Carica papaya HOM05D002704 ORTHO05D002891 1.0e-20 104.0 143 46.2
Manes.02G153000 Manihot esculenta HOM05D002704 ORTHO05D002891 1.0e-20 104.0 135 44.4
PSO210G1059 Papaver somniferum HOM05D002704 ORTHO05D002891 1.0e-20 104.0 128 50.0
Sabra02G0075700 Salix brachista HOM05D002704 ORTHO05D002891 1.0e-20 104.0 152 44.1
Lsat_1_v5_gn_9_41620 Lactuca sativa HOM05D002704 ORTHO05D002891 1.3e-20 103.6 139 43.2
PSO447G0371 Papaver somniferum HOM05D002704 ORTHO05D002891 1.3e-20 103.6 129 48.1
Hund16912 Selenicereus undatus HOM05D002704 ORTHO05D002891 1.3e-20 103.6 135 45.9
ClCG08G011070 Citrullus lanatus HOM05D002704 ORTHO05D002891 1.7e-20 103.2 141 44.0
CsaV3_2G029650 Cucumis sativus L. HOM05D002704 ORTHO05D002891 2.3e-20 102.8 141 42.6
Nitab4.5_0000232g0230 Nicotiana tabacum HOM05D002704 ORTHO05D002891 2.3e-20 102.8 149 42.3
Nitab4.5_0000421g0060 Nicotiana tabacum HOM05D002704 ORTHO05D002891 2.3e-20 102.8 138 41.3
HanXRQChr15g0491861 Helianthus annuus HOM05D002704 ORTHO05D002891 3.0e-20 102.4 137 39.4
CAN.G101.15 Capsicum annuum HOM05D002704 ORTHO05D002891 5.1e-20 101.7 150 42.7
Nn1g05351 Nelumbo nucifera HOM05D002704 ORTHO05D002891 5.1e-20 101.7 151 43.7
Sc23g0000210 Simmondsia chinensis HOM05D002704 ORTHO05D002891 6.6e-20 101.3 142 43.0
Solyc04g074080.3 Solanum lycopersicum HOM05D002704 ORTHO05D002891 6.6e-20 101.3 138 44.9
MELO3C011023.2 Cucumis melo HOM05D002704 ORTHO05D002891 1.1e-19 100.5 152 39.5
Haze_22261 Corylus avellana HOM05D002704 ORTHO05D002891 3.3e-19 99.0 145 37.2
MD08G1182400 Malus domestica HOM05D002704 ORTHO05D002891 4.3e-19 98.6 148 44.6
Oeu012923.1 Olea europaea HOM05D002704 ORTHO05D002891 4.3e-19 98.6 127 42.5
HPP92_011170 Vanilla planifolia HOM05D002704 ORTHO05D002891 4.3e-19 98.6 142 38.7
Potri.002G096100 Populus trichocarpa HOM05D002704 ORTHO05D002891 5.6e-19 98.2 155 39.4
TWI56G1046 Tripterygium wilfordii HOM05D002704 ORTHO05D002891 9.5e-19 97.4 137 42.3
Actinidia10319 Actinidia chinensis HOM05D002704 ORTHO05D002891 1.2e-18 97.1 135 42.2
CANSAT25G0913 Cannabis sativa HOM05D002704 ORTHO05D002891 1.2e-18 97.1 177 37.3
ECA232G3648 Erigeron canadensis HOM05D002704 ORTHO05D000131 2.8e-18 95.9 148 37.8
PGSC0003DMG400006402 Solanum tuberosum HOM05D002704 ORTHO05D002891 6.2e-18 94.7 137 43.1
TWI12G0499 Tripterygium wilfordii HOM05D002704 ORTHO05D002891 6.2e-18 94.7 134 44.0
Sed0024849 Sechium edule HOM05D002704 ORTHO05D002891 8.1e-18 94.4 135 43.0
Eucgr.B00020 Eucalyptus grandis HOM05D002704 ORTHO05D002891 1.1e-17 94.0 144 42.4
ATR0782G003 Amborella trichopoda HOM05D002704 ORTHO05D002891 1.8e-17 93.2 136 42.6
CSS0027836 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 3.1e-17 92.4 140 40.7
DCAR_029361 Daucus carota HOM05D002704 ORTHO05D002891 5.2e-17 91.7 128 42.2
MSTRG.24460 Avicennia marina HOM05D002704 ORTHO05D002891 6.8e-17 91.3 143 37.1
Eucgr.F02409 Eucalyptus grandis HOM05D002704 ORTHO05D002891 6.8e-17 91.3 146 41.1
MSTRG.22153 Avicennia marina HOM05D002704 ORTHO05D002891 2.0e-16 89.7 136 39.7
Actinidia27183 Actinidia chinensis HOM05D002704 ORTHO05D002891 2.6e-16 89.4 133 39.8
Zm00001eb006930 Zea mays HOM05D002704 ORTHO05D002891 2.6e-16 89.4 147 40.1
Cc10_g07250 Coffea canephora HOM05D002704 ORTHO05D002891 5.8e-16 88.2 147 39.5
Oeu046295.1 Olea europaea HOM05D002704 ORTHO05D002891 5.8e-16 88.2 154 39.0
Os03g0191200 Oryza sativa ssp. japonica HOM05D002704 ORTHO05D002891 5.8e-16 88.2 147 34.7
Sc01g0000430 Simmondsia chinensis HOM05D002704 ORTHO05D002891 1.3e-15 87.0 142 38.7
Lj1g0002648 Lotus japonicus HOM05D002704 ORTHO05D002891 4.9e-15 85.1 148 35.8
VMungo1309G0496 Vigna mungo HOM05D002704 ORTHO05D002891 4.9e-15 85.1 149 38.3
Sabra05G0124600 Salix brachista HOM05D002704 ORTHO05D002891 6.4e-15 84.7 78 61.5
Phvul.009G030900 Phaseolus vulgaris HOM05D002704 ORTHO05D002891 1.4e-14 83.6 148 39.2
Zm00001eb401340 Zea mays HOM05D002704 ORTHO05D002891 4.1e-14 82.0 154 34.4
HPP92_019307 Vanilla planifolia HOM05D002704 ORTHO05D002891 1.2e-13 80.5 139 36.7
Ca_05274_v3 Cicer arietinum L. HOM05D002704 ORTHO05D002891 2.7e-13 79.3 135 37.0
Glyma.04G102400 Glycine max HOM05D002704 ORTHO05D002891 6.0e-13 78.2 148 36.5
Rhsim06G0082500 Rhododendron simsii HOM05D002704 ORTHO05D002891 1.3e-12 77.0 141 35.5
Ca_15248_v3 Cicer arietinum L. HOM05D002704 ORTHO05D002891 2.3e-12 76.3 145 35.2
TPR.G32999 Trifolium pratense HOM05D002704 ORTHO05D002891 6.6e-12 74.7 168 33.3
SEGI_20858 Sequoiadendron giganteum HOM05D002704 ORTHO05D002891 1.5e-11 73.6 138 37.0
SEGI_04164 Sequoiadendron giganteum HOM05D002704 ORTHO05D002891 2.5e-11 72.8 133 33.1
Medtr3g074450 Medicago truncatula HOM05D002704 ORTHO05D002891 3.3e-11 72.4 146 34.9
TPR.G34534 Trifolium pratense HOM05D002704 ORTHO05D002891 3.3e-11 72.4 145 36.6
Lalb_Chr10g0102361 Lupinus albus HOM05D002704 ORTHO05D002891 5.6e-11 71.6 153 36.6
Psat5g138480 Pisum sativum HOM05D002704 ORTHO05D002891 7.3e-11 71.2 170 34.7
Actinidia30768 Actinidia chinensis HOM05D002704 ORTHO05D002891 3.6e-10 68.9 41 73.2
Medtr5g063720 Medicago truncatula HOM05D002704 ORTHO05D002891 3.6e-10 68.9 138 32.6
HPP92_011168 Vanilla planifolia HOM05D002704 ORTHO05D002891 3.6e-10 68.9 142 32.4
Nitab4.5_0002098g0040 Nicotiana tabacum HOM05D002704 ORTHO05D002891 6.2e-10 68.2 140 33.6
Psat2g072240 Pisum sativum HOM05D002704 ORTHO05D002891 8.1e-10 67.8 130 34.6
unitig_8.g4838 Utricularia gibba HOM05D002704 ORTHO05D002891 8.1e-10 67.8 154 35.1
vmacro21275 Vaccinium macrocarpon HOM05D002704 ORTHO05D002891 1.1e-09 67.4 141 34.0
Glyma.06G103700 Glycine max HOM05D002704 ORTHO05D002891 1.8e-09 66.6 157 35.7
CiPaw.07G180300 Carya illinoinensis HOM05D002704 ORTHO05D002891 2.4e-09 66.2 128 36.7
arahy.Tifrunner.gnm1.ann1.5JIN69 Arachis hypogaea HOM05D002704 ORTHO05D002891 4.0e-09 65.5 139 34.5
Potri.002G231400 Populus trichocarpa HOM05D002704 ORTHO05D002891 5.2e-09 65.1 128 31.2
Aqoxy2G04081 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 6.8e-09 64.7 130 33.8
Aqoxy6G02333 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 6.8e-09 64.7 130 33.8
Lalb_Chr04g0253151 Lupinus albus HOM05D002704 ORTHO05D002891 6.8e-09 64.7 150 33.3
CSS0004996 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 8.9e-09 64.3 131 29.8
CSS0030073 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 8.9e-09 64.3 131 29.8
Glyma.13G088900 Glycine max HOM05D002704 ORTHO05D002891 8.9e-09 64.3 149 34.2
MSTRG.24593 Avicennia marina HOM05D002704 ORTHO05D002891 1.5e-08 63.5 142 30.3
Manes.04G050300 Manihot esculenta HOM05D002704 ORTHO05D002891 1.5e-08 63.5 134 31.3
Sabra02G0176600 Salix brachista HOM05D002704 ORTHO05D002891 1.5e-08 63.5 128 29.7
Phvul.008G173300 Phaseolus vulgaris HOM05D002704 ORTHO05D002891 3.4e-08 62.4 149 32.2
TAR633G1006 Trochodendron aralioides HOM05D002704 ORTHO05D002891 3.4e-08 62.4 130 30.8
Cpa.g.c36743 Carica papaya HOM05D002704 ORTHO05D002891 4.4e-08 62.0 135 30.4
PSO357G0625 Papaver somniferum HOM05D002704 ORTHO05D002891 4.4e-08 62.0 128 33.6
Lalb_Chr23g0270591 Lupinus albus HOM05D002704 ORTHO05D002891 5.8e-08 61.6 158 32.3
CiPaw.01G106200 Carya illinoinensis HOM05D002704 ORTHO05D002891 9.9e-08 60.8 140 27.1
Manes.11G114400 Manihot esculenta HOM05D002704 ORTHO05D002891 9.9e-08 60.8 129 28.7
Oeu007224.1 Olea europaea HOM05D002704 ORTHO05D002891 9.9e-08 60.8 130 29.2
Oeu007226.1 Olea europaea HOM05D002704 ORTHO05D002891 9.9e-08 60.8 130 29.2
HPP92_023705 Vanilla planifolia HOM05D002704 ORTHO05D002891 1.7e-07 60.1 130 29.2
VMungo0647G0311 Vigna mungo HOM05D002704 ORTHO05D002891 1.7e-07 60.1 143 33.6
Hma1.2p1_0429F.1_g151125 Hydrangea macrophylla HOM05D002704 ORTHO05D002891 2.9e-07 59.3 140 29.3
BcaB03g15984 Brassica carinata HOM05D002704 ORTHO05D002891 3.8e-07 58.9 145 32.4
CDE08G0150 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 4.9e-07 58.5 139 28.8
Dinv44226 Davidia involucrata HOM05D002704 ORTHO05D002891 4.9e-07 58.5 132 28.0
SalBow6G4869 Salvia bowleyana HOM05D002704 ORTHO05D002891 4.9e-07 58.5 130 31.5
CiPaw.02G057300 Carya illinoinensis HOM05D002704 ORTHO05D002891 6.4e-07 58.2 128 29.7
Thhalv10019097m.g Eutrema salsugineum HOM05D002704 ORTHO05D002891 6.4e-07 58.2 143 30.8
GSVIVG01013547001 Vitis vinifera HOM05D002704 ORTHO05D002891 8.4e-07 57.8 134 29.1
Glyma.14G172800 Glycine max HOM05D002704 ORTHO05D002891 1.1e-06 57.4 153 33.3
Peaxi162Scf00286g00244 Petunia axillaris HOM05D002704 ORTHO05D002891 1.1e-06 57.4 140 26.4
Potri.014G150900 Populus trichocarpa HOM05D002704 ORTHO05D002891 1.1e-06 57.4 127 26.8
unitig_578.g16524 Utricularia gibba HOM05D002704 ORTHO05D002891 1.1e-06 57.4 112 37.5
Duzib268G0864 Durio zibethinus HOM05D002704 ORTHO05D002891 1.4e-06 57.0 134 29.1
Oeu006703.1 Olea europaea HOM05D002704 ORTHO05D002891 1.4e-06 57.0 131 27.5
PGSC0003DMG400021617 Solanum tuberosum HOM05D002704 ORTHO05D002891 1.4e-06 57.0 140 25.0
Actinidia17222 Actinidia chinensis HOM05D002704 ORTHO05D002891 1.9e-06 56.6 129 30.2
Ciclev10023373m.g Citrus clementina HOM05D002704 ORTHO05D002891 1.9e-06 56.6 64 39.1
COL.COLO4_24351 Corchorus olitorius HOM05D002704 ORTHO05D002891 1.9e-06 56.6 128 27.3
AL2G38480 Arabidopsis lyrata HOM05D002704 ORTHO05D002891 2.4e-06 56.2 150 30.0
BraA07t30408Z Brassica rapa HOM05D002704 ORTHO05D002891 2.4e-06 56.2 147 27.2
Duzib268G0568 Durio zibethinus HOM05D002704 ORTHO05D002891 3.2e-06 55.8 134 28.4
Os11g0294400 Oryza sativa ssp. japonica HOM05D002704 ORTHO05D002891 3.2e-06 55.8 144 27.8
Prupe.1G182000 Prunus persica HOM05D002704 ORTHO05D002891 3.2e-06 55.8 128 28.1
Gohir.D02G014400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 4.2e-06 55.5 128 28.1
Sp5g33290 Schrenkiella parvula HOM05D002704 ORTHO05D002891 4.2e-06 55.5 151 29.1
Solyc09g098490.4 Solanum lycopersicum HOM05D001811 ORTHO05D001738 4.2e-06 55.5 76 34.2
Atru.chr3.1657 Acer truncatum HOM05D002704 ORTHO05D002891 5.4e-06 55.1 128 29.7
Carub.0002s2506 Capsella rubella HOM05D002704 ORTHO05D002891 5.4e-06 55.1 151 29.1
CARHR071630 Cardamine hirsuta HOM05D002704 ORTHO05D002891 5.4e-06 55.1 161 28.6
BraA02t07210Z Brassica rapa HOM05D002704 ORTHO05D002891 7.1e-06 54.7 147 27.9
Lalb_Chr11g0065441 Lupinus albus HOM05D002704 ORTHO05D002891 7.1e-06 54.7 164 31.7
Pp3c27_4970 Physcomitrium patens HOM05D013579 ORTHO05D004077 9.2e-06 54.3 106 33.0
Sopen09g036400 Solanum pennellii HOM05D002704 ORTHO05D002891 9.2e-06 54.3 64 39.1
THA.LOC104809714 Tarenaya hassleriana HOM05D002704 ORTHO05D002891 9.2e-06 54.3 150 32.0
Thecc.04G181700 Theobroma cacao HOM05D002704 ORTHO05D002891 9.2e-06 54.3 93 32.3


User provided reference genes

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