Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0463 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.6e-115 419.5 213 100.0
CDE12G0925 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 8.7e-106 387.1 217 91.7
CDE01G0139 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.8e-90 336.3 209 82.3
CSS0025565 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 2.9e-29 132.9 238 39.9
Actinidia07371 Actinidia chinensis HOM05D003316 ORTHO05D003690 1.1e-28 131.0 234 39.7
Dinv42487 Davidia involucrata HOM05D003316 ORTHO05D003690 1.9e-28 130.2 245 39.2
Cc05_g16270 Coffea canephora HOM05D003316 ORTHO05D003690 3.3e-28 129.4 244 39.3
Manes.14G011100 Manihot esculenta HOM05D003316 ORTHO05D003690 1.2e-27 127.5 258 39.1
Rhsim06G0241400 Rhododendron simsii HOM05D003316 ORTHO05D003690 2.1e-27 126.7 239 39.3
CSS0004609 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 2.8e-27 126.3 239 40.6
TWI38G0778 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 4.7e-27 125.6 238 40.3
Dinv19599 Davidia involucrata HOM05D003316 ORTHO05D003690 6.1e-27 125.2 236 39.0
CDE02G2536 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.4e-26 124.0 223 39.5
Haze_07827 Corylus avellana HOM05D003316 ORTHO05D003690 3.0e-26 122.9 249 39.0
Nn7g37833 Nelumbo nucifera HOM05D003316 ORTHO05D003690 3.0e-26 122.9 243 37.0
CDE01G0826 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 4.0e-26 122.5 82 74.4
Lj1A910T5 Lonicera japonica HOM05D003316 ORTHO05D003690 4.0e-26 122.5 244 41.0
Medtr2g066700 Medicago truncatula HOM05D003316 ORTHO05D003690 8.9e-26 121.3 249 37.3
CiPaw.11G063000 Carya illinoinensis HOM05D003316 ORTHO05D003690 1.2e-25 120.9 254 39.0
Duzib187G1768 Durio zibethinus HOM05D003316 ORTHO05D003690 4.4e-25 119.0 248 35.1
Sed0011738 Sechium edule HOM05D003316 ORTHO05D003690 4.4e-25 119.0 235 37.9
Lalb_Chr03g0031631 Lupinus albus HOM05D003316 ORTHO05D003690 5.7e-25 118.6 244 37.3
QL04p080199 Quercus lobata HOM05D003316 ORTHO05D003690 5.7e-25 118.6 253 37.2
TPR.G33853 Trifolium pratense HOM05D003316 ORTHO05D003690 5.7e-25 118.6 252 36.5
Eucgr.F04447 Eucalyptus grandis HOM05D003316 ORTHO05D003690 1.3e-24 117.5 252 35.7
vmacro11707 Vaccinium macrocarpon HOM05D003316 ORTHO05D003690 1.3e-24 117.5 239 36.8
Duzib213G0545 Durio zibethinus HOM05D003316 ORTHO05D003690 2.9e-24 116.3 249 35.3
Nitab4.5_0003929g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 3.7e-24 115.9 245 35.1
CsaV3_7G022850 Cucumis sativus L. HOM05D003316 ORTHO05D003690 6.4e-24 115.2 251 37.1
Nitab4.5_0000747g0040 Nicotiana tabacum HOM05D003316 ORTHO05D003690 6.4e-24 115.2 245 35.1
Lalb_Chr20g0108611 Lupinus albus HOM05D003316 ORTHO05D003690 8.3e-24 114.8 251 34.7
Atru.chr1.123 Acer truncatum HOM05D003316 ORTHO05D003690 1.8e-23 113.6 264 36.0
MELO3C012614.2 Cucumis melo HOM05D003316 ORTHO05D003690 1.8e-23 113.6 247 36.8
Potri.007G067300 Populus trichocarpa HOM05D003316 ORTHO05D003690 1.8e-23 113.6 243 35.8
MSTRG.7073 Avicennia marina HOM05D003316 ORTHO05D003690 2.4e-23 113.2 241 38.2
COL.COLO4_07011 Corchorus olitorius HOM05D003316 ORTHO05D003690 2.4e-23 113.2 231 37.2
QL04p080175 Quercus lobata HOM05D003316 ORTHO05D003690 2.4e-23 113.2 222 39.2
PGSC0003DMG400022120 Solanum tuberosum HOM05D003316 ORTHO05D003690 2.4e-23 113.2 225 35.6
Cfa022970 Carpinus fangiana HOM05D003316 ORTHO05D003690 3.2e-23 112.8 249 36.5
Phvul.005G051100 Phaseolus vulgaris HOM05D003316 ORTHO05D003690 3.2e-23 112.8 250 36.4
THA.LOC104813611 Tarenaya hassleriana HOM05D003316 ORTHO05D003690 3.2e-23 112.8 246 36.6
TAR627G0616 Trochodendron aralioides HOM05D003316 ORTHO05D003690 3.2e-23 112.8 233 38.2
Glyma.15G259100 Glycine max HOM05D003316 ORTHO05D003690 5.4e-23 112.1 253 36.8
Lalb_Chr25g0284791 Lupinus albus HOM05D003316 ORTHO05D003690 5.4e-23 112.1 241 34.9
TWI38G1355 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 7.0e-23 111.7 259 34.7
FAN16G3516 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.6e-22 110.5 253 36.4
Psat1g005840 Pisum sativum HOM05D003316 ORTHO05D003690 1.6e-22 110.5 246 35.4
VMungo1080G0561 Vigna mungo HOM05D003316 ORTHO05D003690 1.6e-22 110.5 249 35.7
ClCG09G022660 Citrullus lanatus HOM05D003316 ORTHO05D003690 2.0e-22 110.2 243 35.4
FvH4_3g15360 Fragaria vesca HOM05D003316 ORTHO05D003690 2.0e-22 110.2 253 36.4
FAN11G0988 Fragaria x ananassa HOM05D003316 ORTHO05D003690 2.0e-22 110.2 253 36.4
Gohir.D01G081200 Gossypium hirsutum HOM05D003316 ORTHO05D003690 2.0e-22 110.2 251 34.3
Lj3g0011134 Lotus japonicus HOM05D003316 ORTHO05D003690 2.0e-22 110.2 253 36.4
MBI02_g21020_MAGBIO Magnolia biondii HOM05D003316 ORTHO05D003690 2.0e-22 110.2 246 34.1
Lalb_Chr01g0015851 Lupinus albus HOM05D003316 ORTHO05D003690 3.5e-22 109.4 245 33.1
CDE02G3419 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 4.6e-22 109.0 226 36.3
CDE06G2584 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 4.6e-22 109.0 227 37.4
Gorai.002G106100 Gossypium raimondii HOM05D003316 ORTHO05D003690 5.9e-22 108.6 256 34.4
RcHm_v2.0_Chr5g0025801 Rosa chinensis HOM05D003316 ORTHO05D003690 5.9e-22 108.6 250 34.0
Actinidia35424 Actinidia chinensis HOM05D003316 ORTHO05D003690 7.8e-22 108.2 239 36.0
Migut.M01536 Erythranthe guttata HOM05D003316 ORTHO05D003690 7.8e-22 108.2 243 34.6
Lalb_Chr01g0007091 Lupinus albus HOM05D003316 ORTHO05D003690 1.0e-21 107.8 258 36.4
FAN21G3518 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.7e-21 107.1 253 35.6
PGR031G2416 Punica granatum HOM05D003316 ORTHO05D003690 1.7e-21 107.1 245 37.1
Sed0001262 Sechium edule HOM05D003316 ORTHO05D003690 1.7e-21 107.1 253 35.6
GSVIVG01036804001 Vitis vinifera HOM05D003316 ORTHO05D003690 1.7e-21 107.1 243 35.8
MD05G1223700 Malus domestica HOM05D003316 ORTHO05D003690 3.0e-21 106.3 251 33.5
unitig_37.g12202 Utricularia gibba HOM05D003316 ORTHO05D003690 3.0e-21 106.3 229 33.6
DCAR_013730 Daucus carota HOM05D003316 ORTHO05D003690 3.9e-21 105.9 236 32.6
Gohir.A01G096900 Gossypium hirsutum HOM05D003316 ORTHO05D003690 5.0e-21 105.5 251 33.9
Gorai.013G141800 Gossypium raimondii HOM05D003316 ORTHO05D003690 5.0e-21 105.5 252 35.7
ClCG02G018610 Citrullus lanatus HOM05D003316 ORTHO05D003690 8.6e-21 104.8 249 34.9
Gohir.D13G126700 Gossypium hirsutum HOM05D003316 ORTHO05D003690 8.6e-21 104.8 252 35.7
CDE05G3501 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.5e-20 104.0 228 36.0
FAN25G0335 Fragaria x ananassa HOM05D003316 ORTHO05D003690 1.5e-20 104.0 251 33.9
Gohir.A13G122600 Gossypium hirsutum HOM05D003316 ORTHO05D003690 1.5e-20 104.0 253 36.0
Thecc.07G169200 Theobroma cacao HOM05D003316 ORTHO05D003690 1.5e-20 104.0 256 34.4
MD10G1205200 Malus domestica HOM05D003316 ORTHO05D003690 1.9e-20 103.6 251 34.7
Potri.005G096800 Populus trichocarpa HOM05D003316 ORTHO05D003690 1.9e-20 103.6 246 30.9
Prupe.4G136500 Prunus persica HOM05D003316 ORTHO05D003690 2.5e-20 103.2 253 34.4
MELO3C019643.2 Cucumis melo HOM05D003316 ORTHO05D003690 3.3e-20 102.8 253 32.8
ECA236G2699 Erigeron canadensis HOM05D003316 ORTHO05D003690 3.3e-20 102.8 200 37.5
GSVIVG01038001001 Vitis vinifera HOM05D003316 ORTHO05D003690 3.3e-20 102.8 238 33.2
Peaxi162Scf00452g00411 Petunia axillaris HOM05D003316 ORTHO05D003690 9.5e-20 101.3 243 34.2
SalBow8G1536 Salvia bowleyana HOM05D003316 ORTHO05D003690 9.5e-20 101.3 234 35.0
CsaV3_6G013590 Cucumis sativus L. HOM05D003316 ORTHO05D003690 1.2e-19 100.9 253 32.4
HanXRQChr11g0335691 Helianthus annuus HOM05D003316 ORTHO05D003690 2.1e-19 100.1 242 34.3
MSTRG.16103 Avicennia marina HOM05D003316 ORTHO05D003690 2.8e-19 99.8 233 34.8
ATR0763G052 Amborella trichopoda HOM05D003316 ORTHO05D003690 3.6e-19 99.4 235 32.8
Solyc07g066570.4 Solanum lycopersicum HOM05D003316 ORTHO05D003690 3.6e-19 99.4 214 36.4
SGA_v2.0_scaffold239G44036 Striga asiatica HOM05D003316 ORTHO05D003690 6.2e-19 98.6 244 34.4
Sed0025744 Sechium edule HOM05D003316 ORTHO05D003690 1.0e-18 97.8 252 32.5
Hma1.2p1_0151F.1_g067420 Hydrangea macrophylla HOM05D003316 ORTHO05D003690 1.4e-18 97.4 244 34.0
CSS0033846 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 1.8e-18 97.1 212 38.7
SHI21400 Sapria himalayana HOM05D003316 ORTHO05D003690 1.8e-18 97.1 248 31.9
Lsat_1_v5_gn_7_110360 Lactuca sativa HOM05D003316 ORTHO05D003690 2.3e-18 96.7 248 34.7
Sopen07g034730 Solanum pennellii HOM05D003316 ORTHO05D003690 4.0e-18 95.9 214 35.5
Aa31LG4G1840 Aethionema arabicum HOM05D003316 ORTHO05D003690 6.8e-18 95.1 254 32.7
arahy.Tifrunner.gnm1.ann1.Q78MS7 Arachis hypogaea HOM05D003316 ORTHO05D003690 6.8e-18 95.1 267 31.1
BcaC05g25563 Brassica carinata HOM05D003316 ORTHO05D003690 8.9e-18 94.7 267 31.5
Carub.0001s1625 Capsella rubella HOM05D003316 ORTHO05D003690 8.9e-18 94.7 258 31.4
Eucgr.F01471 Eucalyptus grandis HOM05D003316 ORTHO05D003690 8.9e-18 94.7 193 37.3
Nitab4.5_0008429g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 8.9e-18 94.7 261 31.8
Actinidia12775 Actinidia chinensis HOM05D003316 ORTHO05D003690 1.2e-17 94.4 173 43.4
A06p12480 Brassica napus HOM05D003316 ORTHO05D003690 1.5e-17 94.0 262 32.4
BolC6t40320H Brassica oleracea HOM05D003316 ORTHO05D003690 2.0e-17 93.6 251 31.1
Aa31LG7G1040 Aethionema arabicum HOM05D003316 ORTHO05D003690 2.6e-17 93.2 282 30.5
arahy.Tifrunner.gnm1.ann1.JV1AYU Arachis hypogaea HOM05D003316 ORTHO05D003690 2.6e-17 93.2 268 31.0
BcaNung04897 Brassica carinata HOM05D003316 ORTHO05D003690 2.6e-17 93.2 238 32.8
Sp5g34220 Schrenkiella parvula HOM05D003316 ORTHO05D003690 2.6e-17 93.2 257 30.7
BraA06t24411Z Brassica rapa HOM05D003316 ORTHO05D003690 4.4e-17 92.4 262 32.1
Cpa.g.c44098 Carica papaya HOM05D003316 ORTHO05D003690 7.5e-17 91.7 150 42.7
MSTRG.14558 Avicennia marina HOM05D003316 ORTHO05D003690 9.8e-17 91.3 240 34.2
BcaC05g25564 Brassica carinata HOM05D003316 ORTHO05D003690 9.8e-17 91.3 267 32.2
C05p14730 Brassica napus HOM05D003316 ORTHO05D003690 9.8e-17 91.3 262 32.1
BolC5t30193H Brassica oleracea HOM05D003316 ORTHO05D003690 9.8e-17 91.3 262 32.1
Hund12435 Selenicereus undatus HOM05D003316 ORTHO05D003690 9.8e-17 91.3 242 31.0
QL04p080015 Quercus lobata HOM05D003316 ORTHO05D003690 1.3e-16 90.9 146 43.8
AL2G39640 Arabidopsis lyrata HOM05D003316 ORTHO05D003690 1.7e-16 90.5 260 32.3
Oeu051683.1 Olea europaea HOM05D003316 ORTHO05D003690 1.7e-16 90.5 239 31.8
C08p44470 Brassica napus HOM05D003316 ORTHO05D003690 2.2e-16 90.1 257 31.1
Duzib235G1001 Durio zibethinus HOM05D003316 ORTHO05D003690 2.9e-16 89.7 228 36.0
Potri.001G446800 Populus trichocarpa HOM05D003316 ORTHO05D003690 2.9e-16 89.7 229 32.8
Sed0022394 Sechium edule HOM05D003316 ORTHO05D003690 2.9e-16 89.7 228 32.9
Sc09g0007620 Simmondsia chinensis HOM05D003316 ORTHO05D003690 2.9e-16 89.7 234 35.0
BcaC08g47478 Brassica carinata HOM05D003316 ORTHO05D003690 3.7e-16 89.4 251 30.3
C06p53030 Brassica napus HOM05D003316 ORTHO05D003690 3.7e-16 89.4 251 30.3
MSTRG.13075 Avicennia marina HOM05D003316 ORTHO05D003690 4.9e-16 89.0 238 29.8
THA.LOC104808128 Tarenaya hassleriana HOM05D003316 ORTHO05D003690 4.9e-16 89.0 270 29.6
Duzib192G0114 Durio zibethinus HOM05D003316 ORTHO05D003690 6.4e-16 88.6 229 35.8
Migut.H01676 Erythranthe guttata HOM05D003316 ORTHO05D003690 6.4e-16 88.6 245 32.7
Potri.011G153600 Populus trichocarpa HOM05D003316 ORTHO05D003690 6.4e-16 88.6 231 32.5
CARHR016970 Cardamine hirsuta HOM05D003316 ORTHO05D003690 8.3e-16 88.2 256 30.1
Phvul.011G172700 Phaseolus vulgaris HOM05D003316 ORTHO05D003690 1.1e-15 87.8 205 32.7
BolC8t51988H Brassica oleracea HOM05D003316 ORTHO05D003690 1.4e-15 87.4 257 31.1
Lj3g0011998 Lotus japonicus HOM05D003316 ORTHO05D003690 1.4e-15 87.4 223 32.3
EL10Ac8g18492 Beta vulgaris HOM05D003316 ORTHO05D003690 1.9e-15 87.0 255 34.5
BraA09t41461Z Brassica rapa HOM05D003316 ORTHO05D003690 1.9e-15 87.0 260 29.2
unitig_32.g11082 Utricularia gibba HOM05D003316 ORTHO05D003690 3.2e-15 86.3 233 31.3
A09p60880 Brassica napus HOM05D003316 ORTHO05D003690 4.1e-15 85.9 260 28.8
Ciclev10005652m.g Citrus clementina HOM05D003316 ORTHO05D003690 4.1e-15 85.9 264 28.8
DCAR_016833 Daucus carota HOM05D003316 ORTHO05D003690 1.2e-14 84.3 243 30.0
BcaC08g45373 Brassica carinata HOM05D003316 ORTHO05D003690 2.0e-14 83.6 191 31.9
BcaB02g06634 Brassica carinata HOM05D003316 ORTHO05D003690 7.8e-14 81.6 272 30.1
Manes.06G175000 Manihot esculenta HOM05D003316 ORTHO05D003690 7.8e-14 81.6 260 30.4
A07p44280 Brassica napus HOM05D003316 ORTHO05D003690 1.0e-13 81.3 251 30.3
Sabra16G0301800 Salix brachista HOM05D003316 ORTHO05D003690 1.3e-13 80.9 229 29.7
BcaB02g08670 Brassica carinata HOM05D003316 ORTHO05D003690 1.7e-13 80.5 265 27.9
Lalb_Chr19g0133361 Lupinus albus HOM05D003316 ORTHO05D003690 1.7e-13 80.5 144 39.6
unitig_749.g13695 Utricularia gibba HOM05D003316 ORTHO05D003690 2.3e-13 80.1 193 33.2
BraA07t31937Z Brassica rapa HOM05D003316 ORTHO05D003690 3.0e-13 79.7 251 29.9
Thecc.06G134000 Theobroma cacao HOM05D003316 ORTHO05D003690 3.0e-13 79.7 227 33.9
Carub.0002s2603 Capsella rubella HOM05D003316 ORTHO05D003690 3.9e-13 79.3 263 27.8
Thhalv10008548m.g Eutrema salsugineum HOM05D003316 ORTHO05D003690 5.0e-13 79.0 270 30.0
AT1G16500 Arabidopsis thaliana HOM05D003316 ORTHO05D003690 6.6e-13 78.6 275 27.6
Duzib160G0233 Durio zibethinus HOM05D003316 ORTHO05D003690 1.1e-12 77.8 223 32.7
CARHR072810 Cardamine hirsuta HOM05D003316 ORTHO05D003690 1.9e-12 77.0 254 29.5
HPP92_004183 Vanilla planifolia HOM05D003316 ORTHO05D003690 2.5e-12 76.6 212 29.2
Actinidia37126 Actinidia chinensis HOM05D003316 ORTHO05D003690 5.6e-12 75.5 120 42.5
AT1G79160 Arabidopsis thaliana HOM05D003316 ORTHO05D003690 1.2e-11 74.3 252 28.2
Sabra11G0146100 Salix brachista HOM05D003316 ORTHO05D003690 3.6e-11 72.8 227 30.4
COL.COLO4_30905 Corchorus olitorius HOM05D003316 ORTHO05D003690 6.2e-11 72.0 237 33.3
Sp1g14650 Schrenkiella parvula HOM05D003316 ORTHO05D003690 6.2e-11 72.0 273 26.4
unitig_578.g16328 Utricularia gibba HOM05D003316 ORTHO05D003690 1.4e-10 70.9 236 28.4
C06p30040 Brassica napus HOM05D003316 ORTHO05D003690 2.3e-10 70.1 222 27.9
BolC6t38165H Brassica oleracea HOM05D003316 ORTHO05D003690 2.3e-10 70.1 222 27.9
AL1G28660 Arabidopsis lyrata HOM05D003316 ORTHO05D003690 4.0e-10 69.3 278 28.8
Aqoxy1G01506 Aquilegia oxysepala HOM05D003316 ORTHO05D003690 5.2e-10 68.9 202 30.7
CANSAT80G0009 Cannabis sativa HOM05D003316 ORTHO05D003690 8.9e-10 68.2 293 24.9
Ciclev10016512m.g Citrus clementina HOM05D003316 ORTHO05D003690 1.2e-09 67.8 116 39.7
CAN.G492.73 Capsicum annuum HOM05D003316 ORTHO05D003690 2.0e-09 67.0 199 28.6
Cpa.g.sc136.61 Carica papaya HOM05D003316 ORTHO05D003690 2.2e-08 63.5 140 40.7
Nitab4.5_0000611g0030 Nicotiana tabacum HOM05D003316 ORTHO05D003690 3.7e-08 62.8 192 30.2
unitig_8.g4755 Utricularia gibba HOM05D003316 ORTHO05D003690 3.7e-08 62.8 210 31.0
Aqoxy1G01502 Aquilegia oxysepala HOM05D003316 ORTHO05D003690 1.1e-07 61.2 142 34.5
Thhalv10019040m.g Eutrema salsugineum HOM05D003316 ORTHO05D003690 1.1e-07 61.2 236 26.7
CDE01G0250 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 3.2e-07 59.7 222 26.1
SEGI_30064 Sequoiadendron giganteum HOM05D003316 ORTHO05D003690 5.4e-07 58.9 229 28.8
Sc06g0002770 Simmondsia chinensis HOM05D003316 ORTHO05D003690 7.1e-07 58.5 199 29.1
Atru.chr10.639 Acer truncatum HOM05D003316 ORTHO05D003690 2.7e-06 56.6 135 32.6
Gohir.A10G048700 Gossypium hirsutum HOM05D003316 ORTHO05D003690 3.5e-06 56.2 149 30.9
Gohir.D10G049400 Gossypium hirsutum HOM05D003316 ORTHO05D003690 6.0e-06 55.5 149 30.9
Gorai.011G052900 Gossypium raimondii HOM05D003316 ORTHO05D003690 6.0e-06 55.5 149 30.9


User provided reference genes

Program Settings