Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 9.9e-85 316.6 146 100.0
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 9.6e-64 246.9 140 73.6
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 1.8e-57 226.1 140 72.1
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 2.1e-55 219.2 141 70.9
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 2.1e-55 219.2 142 70.4
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 3.7e-55 218.4 141 69.5
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 3.7e-55 218.4 141 67.4
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 4.8e-55 218.0 140 69.3
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 6.2e-55 217.6 141 68.8
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 6.2e-55 217.6 141 70.2
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 8.1e-55 217.2 142 70.4
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 1.1e-54 216.9 140 70.7
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 1.1e-54 216.9 141 69.5
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 1.4e-54 216.5 141 67.4
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 1.4e-54 216.5 140 70.0
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 1.4e-54 216.5 140 70.0
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 2.4e-54 215.7 141 68.8
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 3.1e-54 215.3 141 68.1
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 3.1e-54 215.3 136 71.3
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 5.3e-54 214.5 139 69.8
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 5.3e-54 214.5 142 69.7
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 5.3e-54 214.5 139 70.5
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 5.3e-54 214.5 141 69.5
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 6.9e-54 214.2 142 69.7
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 6.9e-54 214.2 141 67.4
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 9.0e-54 213.8 141 68.1
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 9.0e-54 213.8 141 67.4
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 1.2e-53 213.4 141 67.4
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 1.2e-53 213.4 141 68.8
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 1.2e-53 213.4 141 68.8
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 1.5e-53 213.0 141 66.7
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 1.5e-53 213.0 141 67.4
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 2.0e-53 212.6 140 70.0
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 2.6e-53 212.2 141 66.0
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 2.6e-53 212.2 142 69.0
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 2.6e-53 212.2 142 69.0
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 3.4e-53 211.8 140 68.6
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 3.4e-53 211.8 141 65.2
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 4.5e-53 211.5 141 65.2
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 4.5e-53 211.5 140 70.0
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 5.8e-53 211.1 141 66.7
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 7.6e-53 210.7 141 67.4
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 7.6e-53 210.7 141 68.8
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 7.6e-53 210.7 141 68.1
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 7.6e-53 210.7 141 68.8
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 9.9e-53 210.3 140 68.6
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 1.3e-52 209.9 140 68.6
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 1.3e-52 209.9 140 68.6
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 1.3e-52 209.9 140 68.6
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 1.3e-52 209.9 140 68.6
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.3e-52 209.9 140 67.9
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 1.7e-52 209.5 140 69.3
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 1.7e-52 209.5 141 67.4
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 1.7e-52 209.5 140 68.6
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 1.7e-52 209.5 141 66.7
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 1.7e-52 209.5 141 67.4
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 2.2e-52 209.1 140 70.7
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 2.2e-52 209.1 142 69.0
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 2.2e-52 209.1 140 68.6
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 2.9e-52 208.8 142 68.3
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 4.9e-52 208.0 140 65.7
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 4.9e-52 208.0 141 66.0
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 4.9e-52 208.0 140 65.7
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 6.4e-52 207.6 140 68.6
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 8.4e-52 207.2 143 65.7
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 8.4e-52 207.2 140 69.3
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 1.9e-51 206.1 140 65.7
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 1.9e-51 206.1 140 67.1
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 1.9e-51 206.1 140 67.1
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 2.4e-51 205.7 142 69.7
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 2.4e-51 205.7 141 64.5
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 2.4e-51 205.7 139 69.1
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 3.2e-51 205.3 138 66.7
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 4.2e-51 204.9 142 65.5
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 1.2e-50 203.4 141 64.5
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 1.2e-50 203.4 138 60.9
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 2.7e-50 202.2 140 66.4
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 2.7e-50 202.2 139 66.9
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 3.5e-50 201.8 140 65.7
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 6.0e-50 201.1 141 64.5
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 1.3e-49 199.9 141 65.2
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 8.7e-49 197.2 146 64.4
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 2.5e-48 195.7 140 63.6
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 1.6e-47 193.0 133 62.4
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 1.1e-43 180.3 140 63.6
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 3.2e-43 178.7 138 56.5
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 4.2e-43 178.3 178 50.0
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 7.4e-40 167.5 138 58.0
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 2.6e-37 159.1 237 38.4
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 5.9e-37 157.9 101 72.3
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 1.7e-36 156.4 101 70.3
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 4.8e-31 138.3 94 66.0
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 2.4e-30 136.0 77 79.2
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 1.8e-25 119.8 62 82.3
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 2.6e-24 115.9 63 82.5
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 2.6e-24 115.9 58 82.8
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 2.2e-23 112.8 60 80.0
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 2.8e-23 112.5 91 57.1
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 2.4e-22 109.4 91 54.9
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 5.9e-21 104.8 85 58.8
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 3.8e-20 102.1 82 58.5
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 6.5e-20 101.3 84 59.5
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 8.0e-18 94.4 84 57.1
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 1.8e-17 93.2 82 53.7
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.6e-10 70.1 69 55.1


User provided reference genes

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