Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.0e-45 186.4 95 100.0
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.1e-39 166.4 100 89.0
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 1.3e-32 142.9 93 76.3
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.3e-32 142.9 93 76.3
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 3.7e-32 141.4 93 75.3
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 3.7e-32 141.4 93 75.3
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.1e-31 139.8 90 74.4
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.1e-31 139.8 90 74.4
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 1.8e-31 139.0 93 74.2
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 2.4e-31 138.7 93 74.2
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 3.1e-31 138.3 93 74.2
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 3.1e-31 138.3 88 76.1
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 9.1e-31 136.7 93 72.0
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 9.1e-31 136.7 95 71.6
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 1.2e-30 136.3 93 72.0
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.6e-30 136.0 93 72.0
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.6e-30 136.0 93 73.1
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.6e-30 136.0 93 73.1
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 1.6e-30 136.0 93 73.1
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 1.6e-30 136.0 85 78.8
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 2.0e-30 135.6 93 69.9
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.6e-30 135.2 92 71.7
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 2.6e-30 135.2 93 72.0
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 3.5e-30 134.8 87 78.2
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 3.5e-30 134.8 87 78.2
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 3.5e-30 134.8 93 71.0
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 3.5e-30 134.8 93 71.0
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 4.5e-30 134.4 93 73.1
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 4.5e-30 134.4 92 71.7
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 4.5e-30 134.4 93 71.0
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 5.9e-30 134.0 93 71.0
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 5.9e-30 134.0 92 71.7
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 7.7e-30 133.7 91 71.4
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 7.7e-30 133.7 93 71.0
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 1.0e-29 133.3 93 68.8
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 1.0e-29 133.3 93 68.8
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 1.3e-29 132.9 89 73.0
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 1.3e-29 132.9 87 74.7
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 1.3e-29 132.9 93 69.9
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 1.3e-29 132.9 93 68.8
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 1.7e-29 132.5 93 69.9
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 1.7e-29 132.5 93 67.7
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 1.7e-29 132.5 93 71.0
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 2.2e-29 132.1 93 68.8
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 2.9e-29 131.7 83 78.3
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 2.9e-29 131.7 81 80.2
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 5.0e-29 131.0 93 67.7
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 6.5e-29 130.6 91 71.4
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 6.5e-29 130.6 93 69.9
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 6.5e-29 130.6 93 68.8
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 6.5e-29 130.6 93 66.7
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 8.5e-29 130.2 93 67.7
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 8.5e-29 130.2 93 66.7
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 1.1e-28 129.8 91 68.1
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 1.1e-28 129.8 91 68.1
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 1.9e-28 129.0 87 72.4
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.9e-28 129.0 81 77.8
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 2.5e-28 128.6 94 69.1
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 3.2e-28 128.3 82 76.8
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 4.2e-28 127.9 93 64.5
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 4.2e-28 127.9 89 69.7
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 5.5e-28 127.5 94 70.2
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 5.5e-28 127.5 81 76.5
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 7.2e-28 127.1 81 76.5
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 7.2e-28 127.1 80 78.8
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 7.2e-28 127.1 83 74.7
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 9.4e-28 126.7 93 71.0
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 1.2e-27 126.3 95 67.4
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.6e-27 125.9 81 77.8
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 1.6e-27 125.9 92 68.5
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.6e-27 125.9 81 76.5
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 2.7e-27 125.2 79 78.5
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 3.6e-27 124.8 89 67.4
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 3.6e-27 124.8 83 73.5
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 4.7e-27 124.4 91 68.1
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 6.1e-27 124.0 79 75.9
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 6.1e-27 124.0 79 75.9
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 6.1e-27 124.0 79 75.9
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 6.1e-27 124.0 79 75.9
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 6.1e-27 124.0 95 65.3
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 6.1e-27 124.0 85 71.8
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 8.0e-27 123.6 79 75.9
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 1.4e-26 122.9 81 75.3
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 1.4e-26 122.9 79 77.2
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 1.8e-26 122.5 79 74.7
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 2.3e-26 122.1 86 70.9
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 6.7e-26 120.6 89 66.3
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 6.7e-26 120.6 89 66.3
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 8.8e-26 120.2 83 69.9
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 1.2e-25 119.8 83 71.1
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 1.5e-25 119.4 101 63.4
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.5e-25 119.4 81 72.8
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 3.3e-25 118.2 93 62.4
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 5.7e-25 117.5 94 61.7
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 1.8e-23 112.5 83 67.5
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 7.7e-22 107.1 68 76.5
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 1.7e-21 105.9 95 60.0
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 1.7e-21 105.9 75 69.3
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 2.2e-21 105.5 73 69.9
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 3.8e-21 104.8 73 68.5
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 3.8e-21 104.8 75 68.0
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 8.5e-21 103.6 72 69.4
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 1.9e-20 102.4 72 66.7
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 3.2e-20 101.7 79 63.3
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 4.2e-20 101.3 80 63.8
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 7.2e-20 100.5 73 68.5
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 1.2e-19 99.8 63 77.8
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 3.6e-19 98.2 70 67.1
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 3.6e-19 98.2 65 72.3
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 1.8e-18 95.9 80 58.8
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 2.3e-18 95.5 72 63.9
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 4.0e-18 94.7 72 63.9
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 5.2e-18 94.4 68 66.2
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 1.2e-17 93.2 79 60.8
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 4.4e-17 91.3 79 54.4
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 1.0e-13 80.1 107 48.6


User provided reference genes

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