Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 2.5e-59 232.3 152 100.0
CDE04G0133 Ceratophyllum demersum HOM05D000001 ORTHO05D000003 3.2e-30 135.6 84 88.1
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 2.7e-16 89.4 77 66.2
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 1.5e-14 83.6 92 56.5
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 2.5e-14 82.8 108 53.7
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 4.3e-14 82.0 102 50.0
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 9.5e-14 80.9 83 55.4
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 9.5e-14 80.9 92 55.4
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.2e-13 80.5 101 50.5
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 1.6e-13 80.1 105 49.5
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 2.1e-13 79.7 77 58.4
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 8.0e-13 77.8 79 55.7
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 1.0e-12 77.4 101 49.5
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 1.4e-12 77.0 91 52.7
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 1.8e-12 76.6 103 51.5
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 2.3e-12 76.3 119 44.5
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 3.0e-12 75.9 109 47.7
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 4.0e-12 75.5 78 56.4
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 4.0e-12 75.5 78 56.4
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 4.0e-12 75.5 110 48.2
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 5.2e-12 75.1 104 49.0
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 6.8e-12 74.7 110 47.3
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 8.9e-12 74.3 94 50.0
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 2.6e-11 72.8 85 55.3
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 2.6e-11 72.8 82 51.2
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 3.4e-11 72.4 82 52.4
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 3.4e-11 72.4 106 49.1
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 5.7e-11 71.6 106 48.1
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 7.5e-11 71.2 118 47.5
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 1.7e-10 70.1 95 47.4
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 2.9e-10 69.3 115 45.2
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 2.9e-10 69.3 107 44.9
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 4.9e-10 68.6 119 43.7
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 4.9e-10 68.6 73 53.4
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 6.4e-10 68.2 104 47.1
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 8.3e-10 67.8 99 48.5
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 8.3e-10 67.8 77 53.2
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 1.1e-09 67.4 77 51.9
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 1.1e-09 67.4 77 51.9
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 2.4e-09 66.2 77 51.9
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 2.4e-09 66.2 98 45.9
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 2.4e-09 66.2 103 44.7
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 4.1e-09 65.5 119 42.9
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 7.0e-09 64.7 78 50.0
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 9.2e-09 64.3 118 44.1
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 1.6e-08 63.5 83 48.2
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 2.7e-08 62.8 77 50.6
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 2.7e-08 62.8 60 61.7
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 3.5e-08 62.4 77 48.1
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 7.8e-08 61.2 77 51.9
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 7.8e-08 61.2 95 47.4
FAN04G2965 Fragaria x ananassa HOM05D007324 ORTHO05D007884 3.9e-07 58.9 114 37.7
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 3.9e-07 58.9 78 51.3
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 5.0e-07 58.5 84 42.9
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 8.6e-07 57.8 68 48.5
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 8.6e-07 57.8 75 49.3
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 1.1e-06 57.4 77 50.6
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 1.5e-06 57.0 92 42.4
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 1.5e-06 57.0 114 37.7
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 1.5e-06 57.0 52 61.5
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 1.9e-06 56.6 103 42.7
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 1.9e-06 56.6 103 41.7
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 2.5e-06 56.2 90 43.3
Aqoxy3G02405 Aquilegia oxysepala HOM05D007324 ORTHO05D007884 4.3e-06 55.5 57 56.1
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 4.3e-06 55.5 143 34.3
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 9.5e-06 54.3 115 39.1
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 9.5e-06 54.3 73 46.6
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 9.5e-06 54.3 73 46.6


User provided reference genes

Program Settings