Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 5.7e-95 350.9 176 100.0
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 4.0e-64 248.4 177 71.2
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 8.3e-62 240.7 177 71.2
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 2.7e-60 235.7 173 69.9
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 2.3e-59 232.6 177 68.9
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 2.3e-59 232.6 177 70.1
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 8.6e-59 230.7 176 69.9
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.1e-58 230.3 179 68.2
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 1.1e-58 230.3 174 69.0
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 1.5e-58 229.9 174 69.5
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 3.6e-57 225.3 174 66.7
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 4.7e-57 224.9 176 66.5
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.0e-56 223.8 178 69.7
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.4e-56 223.4 178 69.7
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 1.4e-56 223.4 176 68.8
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 2.3e-56 222.6 129 82.9
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 3.0e-56 222.2 182 64.8
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 5.2e-56 221.5 176 65.3
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 5.2e-56 221.5 178 69.1
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 2.0e-55 219.5 133 79.7
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 4.4e-55 218.4 175 67.4
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 5.7e-55 218.0 174 66.1
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 5.7e-55 218.0 175 65.1
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 7.5e-55 217.6 148 73.6
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 9.8e-55 217.2 174 67.2
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 9.8e-55 217.2 137 75.9
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 1.7e-54 216.5 146 76.0
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 1.7e-54 216.5 184 63.0
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 2.9e-54 215.7 174 64.9
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 3.7e-54 215.3 174 66.7
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 6.4e-54 214.5 176 67.0
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 6.4e-54 214.5 178 65.7
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 6.4e-54 214.5 183 65.6
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 8.3e-54 214.2 176 65.3
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 1.1e-53 213.8 178 67.4
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.4e-53 213.4 179 64.2
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 4.1e-53 211.8 125 81.6
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 4.1e-53 211.8 178 65.7
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 9.2e-53 210.7 138 74.6
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 1.2e-52 210.3 176 66.5
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 2.7e-52 209.1 187 62.6
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 3.5e-52 208.8 177 64.4
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 3.5e-52 208.8 122 82.0
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 1.0e-51 207.2 177 62.1
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 1.3e-51 206.8 170 64.1
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 3.0e-51 205.7 181 61.9
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 3.9e-51 205.3 174 64.9
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 5.0e-51 204.9 177 62.7
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 1.1e-50 203.8 127 77.2
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 1.1e-50 203.8 122 81.1
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 1.5e-50 203.4 139 73.4
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 1.5e-50 203.4 185 61.1
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 1.9e-50 203.0 138 73.9
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 1.9e-50 203.0 180 58.9
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 1.9e-50 203.0 181 63.5
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 2.5e-50 202.6 180 58.9
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 3.3e-50 202.2 175 62.9
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 3.3e-50 202.2 175 62.9
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 5.6e-50 201.4 176 64.8
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 7.3e-50 201.1 178 59.6
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 7.3e-50 201.1 129 75.2
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 9.5e-50 200.7 179 59.8
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 9.5e-50 200.7 179 59.8
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 9.5e-50 200.7 136 74.3
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 9.5e-50 200.7 183 60.7
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 1.2e-49 200.3 120 79.2
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 1.6e-49 199.9 179 58.7
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 1.6e-49 199.9 177 63.3
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 2.1e-49 199.5 119 79.8
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 2.8e-49 199.1 179 59.2
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 2.8e-49 199.1 179 59.2
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 2.8e-49 199.1 189 59.3
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 2.8e-49 199.1 175 62.9
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 4.7e-49 198.4 202 56.4
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 4.7e-49 198.4 180 58.9
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 4.7e-49 198.4 180 57.8
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 4.7e-49 198.4 180 58.9
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 4.7e-49 198.4 180 58.9
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 4.7e-49 198.4 121 78.5
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 8.0e-49 197.6 180 57.8
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 8.0e-49 197.6 180 57.8
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 8.0e-49 197.6 180 57.8
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 1.1e-48 197.2 180 57.8
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 1.1e-48 197.2 136 72.8
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 1.1e-48 197.2 120 79.2
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 1.4e-48 196.8 127 74.0
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 1.8e-48 196.4 125 76.0
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 3.1e-48 195.7 120 76.7
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 5.2e-48 194.9 179 61.5
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 2.0e-47 193.0 177 61.6
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 4.4e-47 191.8 130 70.0
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 5.8e-47 191.4 178 57.9
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 7.5e-47 191.0 121 73.6
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 1.3e-46 190.3 113 80.5
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 3.2e-45 185.7 178 55.6
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 1.7e-43 179.9 120 70.0
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 1.2e-41 173.7 183 52.5
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 4.0e-40 168.7 182 52.7
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 6.8e-40 167.9 119 63.9
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 7.5e-39 164.5 128 61.7
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 1.7e-38 163.3 185 51.4
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 2.4e-37 159.5 178 53.4
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.5e-31 140.2 106 66.0
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.5e-31 140.2 106 66.0
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 5.6e-26 121.7 177 45.2
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 8.1e-25 117.9 102 60.8
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 1.1e-24 117.5 121 59.5
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 1.7e-22 110.2 58 84.5
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 3.2e-21 105.9 115 53.9
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 9.3e-21 104.4 119 54.6
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 2.3e-19 99.8 67 68.7
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 6.2e-17 91.7 63 74.6
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 4.5e-07 58.9 112 47.3


User provided reference genes

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