Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 7.7e-74 280.4 143 100.0
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 5.4e-43 177.9 139 66.9
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 1.2e-39 166.8 138 62.3
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 1.8e-38 162.9 144 62.5
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 5.2e-38 161.4 150 60.7
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 5.2e-38 161.4 149 58.4
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 6.8e-38 161.0 150 57.3
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 1.5e-37 159.8 143 58.7
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 2.0e-37 159.5 141 63.1
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 3.4e-37 158.7 150 58.7
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 4.4e-37 158.3 152 59.2
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 5.7e-37 157.9 151 58.3
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 9.8e-37 157.1 149 59.7
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 1.7e-36 156.4 151 57.0
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 3.7e-36 155.2 151 58.3
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 4.9e-36 154.8 148 56.8
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 4.9e-36 154.8 150 56.7
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 4.9e-36 154.8 148 56.8
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 4.9e-36 154.8 144 61.1
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 6.3e-36 154.5 154 55.8
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 8.3e-36 154.1 143 60.1
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 8.3e-36 154.1 150 57.3
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 1.1e-35 153.7 151 56.3
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 1.1e-35 153.7 154 55.8
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 1.1e-35 153.7 143 60.1
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.4e-35 153.3 153 56.9
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 1.8e-35 152.9 143 58.7
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 2.4e-35 152.5 143 58.7
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 2.4e-35 152.5 142 58.5
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 2.4e-35 152.5 143 59.4
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 3.1e-35 152.1 149 55.7
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 3.1e-35 152.1 150 57.3
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 3.1e-35 152.1 150 57.3
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 4.1e-35 151.8 142 57.7
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 4.1e-35 151.8 149 57.0
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 4.1e-35 151.8 143 60.1
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 5.4e-35 151.4 142 57.0
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 5.4e-35 151.4 142 57.0
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 5.4e-35 151.4 142 57.0
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 5.4e-35 151.4 143 58.7
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 5.4e-35 151.4 143 59.4
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 7.0e-35 151.0 145 60.7
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 7.0e-35 151.0 138 60.9
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 7.0e-35 151.0 139 61.2
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 7.0e-35 151.0 141 59.6
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 1.2e-34 150.2 141 60.3
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 1.2e-34 150.2 139 62.6
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 2.0e-34 149.4 144 56.9
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 2.0e-34 149.4 143 60.8
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 2.7e-34 149.1 138 58.0
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 2.7e-34 149.1 138 58.0
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 2.7e-34 149.1 144 58.3
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 3.5e-34 148.7 149 57.0
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 3.5e-34 148.7 142 57.0
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 3.5e-34 148.7 141 56.0
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 3.5e-34 148.7 139 57.6
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 4.5e-34 148.3 96 80.2
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 4.5e-34 148.3 138 59.4
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 5.9e-34 147.9 145 57.9
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 7.8e-34 147.5 142 58.5
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 7.8e-34 147.5 150 55.3
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 7.8e-34 147.5 144 57.6
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 7.8e-34 147.5 145 59.3
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 1.0e-33 147.1 151 55.6
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 1.0e-33 147.1 143 56.6
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 1.0e-33 147.1 144 55.6
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 1.0e-33 147.1 143 58.7
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 1.3e-33 146.7 142 59.2
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 1.3e-33 146.7 147 58.5
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 1.3e-33 146.7 142 56.3
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.3e-33 146.7 145 55.2
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 1.3e-33 146.7 139 58.3
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 1.7e-33 146.4 145 56.6
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 1.7e-33 146.4 144 56.9
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 2.3e-33 146.0 143 56.6
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 2.3e-33 146.0 145 56.6
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 2.9e-33 145.6 145 57.9
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.9e-33 145.6 149 55.0
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 2.9e-33 145.6 149 55.7
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 3.8e-33 145.2 146 56.8
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 5.0e-33 144.8 143 58.0
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 5.0e-33 144.8 143 58.0
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 5.0e-33 144.8 148 56.8
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 6.6e-33 144.4 142 57.7
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 6.6e-33 144.4 142 57.7
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 6.6e-33 144.4 144 56.9
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 8.6e-33 144.1 144 57.6
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 8.6e-33 144.1 146 55.5
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 8.6e-33 144.1 138 58.0
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 1.1e-32 143.7 145 53.8
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 1.1e-32 143.7 146 54.8
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 1.9e-32 142.9 145 56.6
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 2.5e-32 142.5 148 56.8
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 2.5e-32 142.5 142 58.5
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 2.5e-32 142.5 140 59.3
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 4.3e-32 141.7 150 54.0
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 4.3e-32 141.7 141 56.7
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 5.6e-32 141.4 129 57.4
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 2.1e-31 139.4 147 56.5
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 4.7e-31 138.3 144 54.2
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 4.7e-31 138.3 145 53.8
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 6.1e-31 137.9 141 58.2
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 1.4e-30 136.7 146 54.8
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 1.8e-30 136.3 148 54.1
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 1.8e-30 136.3 147 53.7
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 4.0e-30 135.2 144 54.9
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 5.2e-30 134.8 155 52.9
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 3.4e-29 132.1 148 53.4
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 1.7e-28 129.8 145 53.8
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 3.5e-26 122.1 141 52.5
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 4.6e-26 121.7 172 45.3
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 5.6e-24 114.8 146 47.3
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 9.5e-24 114.0 143 48.3
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 1.2e-23 113.6 94 63.8
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 2.1e-23 112.8 151 47.0
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 1.4e-22 110.2 139 48.2
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 5.2e-22 108.2 145 47.6
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 1.2e-21 107.1 152 42.1
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 1.5e-21 106.7 200 40.0
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 1.3e-20 103.6 137 44.5
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 5.0e-17 91.7 94 56.4
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 1.2e-10 70.5 91 44.0
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 6.6e-09 64.7 189 30.2
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 6.6e-09 64.7 189 30.2
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 4.7e-07 58.5 95 41.1
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 1.1e-06 57.4 37 73.0


User provided reference genes

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