Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0192 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 6.0e-112 407.5 208 100.0
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 5.2e-55 218.4 140 83.6
CDE05G3540 Ceratophyllum demersum HOM05D005744 ORTHO05D130478 4.0e-47 192.2 103 94.2
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 1.6e-35 153.7 139 58.3
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 4.7e-32 142.1 141 52.5
TAR629G2476 Trochodendron aralioides HOM05D005744 ORTHO05D007503 6.2e-32 141.7 145 54.5
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 3.1e-31 139.4 148 51.4
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 7.6e-30 134.8 150 52.0
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 9.9e-30 134.4 139 53.2
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 1.7e-29 133.7 144 54.2
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 1.7e-29 133.7 143 54.5
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 3.8e-29 132.5 143 52.4
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 4.9e-29 132.1 143 49.7
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 6.4e-29 131.7 140 50.7
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 6.4e-29 131.7 147 55.8
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 1.1e-28 131.0 139 50.4
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 1.1e-28 131.0 139 53.2
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 1.9e-28 130.2 155 49.7
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 2.4e-28 129.8 144 53.5
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 3.2e-28 129.4 139 49.6
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 3.2e-28 129.4 143 54.5
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 3.2e-28 129.4 143 54.5
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 3.2e-28 129.4 130 53.8
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 4.2e-28 129.0 144 52.8
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 4.2e-28 129.0 140 53.6
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 4.2e-28 129.0 144 52.8
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 4.2e-28 129.0 139 49.6
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 4.2e-28 129.0 139 50.4
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 5.4e-28 128.6 155 49.0
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 7.1e-28 128.3 141 54.6
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 7.1e-28 128.3 155 49.7
Cpa.g.sc2981.2 Carica papaya HOM05D005744 ORTHO05D007503 1.2e-27 127.5 148 51.4
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 1.6e-27 127.1 139 48.2
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 1.6e-27 127.1 139 48.2
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 2.1e-27 126.7 146 51.4
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 3.5e-27 125.9 147 50.3
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 3.5e-27 125.9 143 51.0
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 4.6e-27 125.6 134 52.2
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 4.6e-27 125.6 142 50.7
Nitab4.5_0000479g0030 Nicotiana tabacum HOM05D005744 ORTHO05D007503 6.0e-27 125.2 157 50.3
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 7.8e-27 124.8 149 49.7
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 1.7e-26 123.6 140 52.1
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 3.9e-26 122.5 139 50.4
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 3.9e-26 122.5 140 50.7
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 5.1e-26 122.1 145 49.7
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 8.7e-26 121.3 139 49.6
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 8.7e-26 121.3 139 51.8
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 8.7e-26 121.3 154 44.8
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 1.1e-25 120.9 139 51.1
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 1.1e-25 120.9 140 52.9
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 1.5e-25 120.6 145 48.3
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 1.9e-25 120.2 151 47.0
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 2.5e-25 119.8 156 45.5
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 3.3e-25 119.4 150 45.3
AT4G24880 Arabidopsis thaliana HOM05D005744 ORTHO05D007503 5.6e-25 118.6 163 49.7
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 7.3e-25 118.2 139 48.2
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 7.3e-25 118.2 142 49.3
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 7.3e-25 118.2 149 46.3
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 7.3e-25 118.2 149 46.3
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 9.6e-25 117.9 157 48.4
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 9.6e-25 117.9 143 47.6
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 1.6e-24 117.1 144 47.9
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 2.1e-24 116.7 152 46.7
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 2.8e-24 116.3 147 47.6
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 2.8e-24 116.3 134 48.5
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 3.6e-24 115.9 144 50.0
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 3.6e-24 115.9 139 51.1
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 3.6e-24 115.9 149 47.7
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 3.6e-24 115.9 146 46.6
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 8.1e-24 114.8 138 49.3
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 8.1e-24 114.8 139 48.2
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 1.4e-23 114.0 146 48.6
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 1.8e-23 113.6 151 45.0
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 2.4e-23 113.2 142 46.5
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 2.4e-23 113.2 142 47.9
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 2.4e-23 113.2 142 46.5
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 5.3e-23 112.1 139 50.4
PSO478G2520 Papaver somniferum HOM05D005744 ORTHO05D007503 5.3e-23 112.1 144 46.5
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 6.9e-23 111.7 152 44.1
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 6.9e-23 111.7 139 49.6
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 9.0e-23 111.3 148 51.4
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 9.0e-23 111.3 142 45.8
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 9.0e-23 111.3 146 45.9
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 1.2e-22 110.9 142 45.8
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 1.2e-22 110.9 142 45.8
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 1.5e-22 110.5 139 46.0
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 2.6e-22 109.8 138 42.0
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 5.8e-22 108.6 139 47.5
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 7.6e-22 108.2 149 45.0
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 7.6e-22 108.2 139 48.9
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 9.9e-22 107.8 139 45.3
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.3e-21 107.5 139 46.8
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 3.8e-21 105.9 139 45.3
QL10p003203 Quercus lobata HOM05D005744 ORTHO05D007503 4.9e-21 105.5 139 46.8
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 1.1e-20 104.4 143 44.1
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 1.1e-20 104.4 143 44.1
Mapoly0024s0037 Marchantia polymorpha HOM05D005744 ORTHO05D007503 6.0e-19 98.6 154 42.9
TAR633G0019 Trochodendron aralioides HOM05D005744 ORTHO05D007503 3.0e-18 96.3 62 69.4
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 2.5e-17 93.2 118 45.8
Eucgr.K02730 Eucalyptus grandis HOM05D005744 ORTHO05D007503 9.6e-17 91.3 156 39.7
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 9.6e-17 91.3 142 44.4
SEGI_05259 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 8.1e-16 88.2 156 40.4
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 1.8e-15 87.0 122 42.6
Zm00001eb354570 Zea mays HOM05D005744 ORTHO05D007503 2.4e-15 86.7 55 70.9
Actinidia33099 Actinidia chinensis HOM05D005744 ORTHO05D007503 3.1e-15 86.3 69 62.3
FvH4_4g11820 Fragaria vesca HOM05D005744 ORTHO05D007503 4.0e-15 85.9 205 33.7
FAN12G3536 Fragaria x ananassa HOM05D005744 ORTHO05D007503 4.0e-15 85.9 205 33.7
SMO364G0648 Selaginella moellendorffii HOM05D005744 ORTHO05D007503 9.0e-15 84.7 136 37.5
Aa31LG7G10970 Aethionema arabicum HOM05D005744 ORTHO05D007503 1.2e-14 84.3 123 44.7
Eucgr.L02977 Eucalyptus grandis HOM05D005744 ORTHO05D007503 3.4e-14 82.8 166 34.9
Lsat_1_v5_gn_8_77640 Lactuca sativa HOM05D005744 ORTHO05D007503 5.8e-14 82.0 89 51.7
Pp3c8_11540 Physcomitrium patens HOM05D005744 ORTHO05D007503 1.3e-13 80.9 156 36.5
FAN12G3591 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.7e-11 73.2 180 30.6


User provided reference genes

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