Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 7.4e-90 334.0 182 100.0
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 6.4e-33 144.8 188 47.3
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 1.1e-32 144.1 196 47.4
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.4e-32 142.9 196 48.5
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 2.5e-29 132.9 129 55.8
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 2.5e-29 132.9 127 55.1
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 4.7e-28 128.6 180 41.7
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 8.1e-28 127.9 155 45.2
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 5.2e-27 125.2 124 53.2
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 8.9e-27 124.4 134 51.5
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 2.0e-26 123.2 125 52.0
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 3.4e-26 122.5 138 46.4
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 5.8e-26 121.7 126 49.2
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 7.6e-26 121.3 135 45.9
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 9.9e-26 120.9 131 50.4
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 9.9e-26 120.9 161 42.2
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 1.3e-25 120.6 135 46.7
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 1.3e-25 120.6 140 47.1
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 1.7e-25 120.2 188 39.9
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 1.7e-25 120.2 129 51.2
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 2.2e-25 119.8 156 45.5
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 3.8e-25 119.0 179 41.9
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 6.4e-25 118.2 126 49.2
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 6.4e-25 118.2 126 49.2
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 6.4e-25 118.2 131 48.9
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 1.1e-24 117.5 131 48.9
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 1.4e-24 117.1 131 49.6
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.4e-24 116.3 142 45.1
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 3.2e-24 115.9 182 40.1
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 3.2e-24 115.9 179 41.9
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 5.4e-24 115.2 149 46.3
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 5.4e-24 115.2 182 43.4
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 7.1e-24 114.8 199 39.2
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 9.3e-24 114.4 179 43.0
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 1.2e-23 114.0 162 42.0
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 1.6e-23 113.6 132 48.5
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 1.6e-23 113.6 171 40.9
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 2.7e-23 112.8 154 40.3
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 6.0e-23 111.7 126 46.8
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 1.0e-22 110.9 176 37.5
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.3e-22 110.5 166 47.0
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 3.9e-22 109.0 128 44.5
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 5.1e-22 108.6 148 41.9
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 5.1e-22 108.6 181 37.6
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 4.3e-21 105.5 215 35.3
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 4.3e-21 105.5 133 43.6
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 4.3e-21 105.5 133 43.6
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 4.3e-21 105.5 133 43.6
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 4.3e-21 105.5 155 39.4
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 9.6e-21 104.4 187 39.6
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 9.6e-21 104.4 187 39.6
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 9.6e-21 104.4 147 40.1
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 1.3e-20 104.0 170 40.0
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 2.8e-20 102.8 141 41.8
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.8e-20 102.8 133 42.1
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 4.8e-20 102.1 194 36.6
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 4.8e-20 102.1 122 49.2
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 1.1e-19 100.9 180 40.6
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 1.8e-19 100.1 102 53.9
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 5.3e-19 98.6 133 40.6
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 9.0e-19 97.8 143 40.6
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 2.0e-18 96.7 165 35.8
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 3.4e-18 95.9 125 40.8
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 9.9e-18 94.4 161 34.8
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 1.7e-17 93.6 173 37.6
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 1.7e-17 93.6 185 38.9
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 3.8e-17 92.4 106 46.2
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 4.9e-17 92.0 190 37.9
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 6.4e-17 91.7 160 40.6
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 8.4e-17 91.3 93 52.7
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 1.1e-16 90.9 174 37.4
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 1.1e-16 90.9 124 43.5
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.1e-16 90.9 180 36.1
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 1.9e-16 90.1 81 55.6
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 4.2e-16 89.0 80 56.2
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 1.6e-15 87.0 186 35.5
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 1.0e-14 84.3 165 37.6
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 1.3e-14 84.0 78 55.1
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 1.3e-14 84.0 79 53.2
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 3.0e-14 82.8 81 51.9
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 3.9e-14 82.4 110 43.6
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 8.7e-14 81.3 78 51.3
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 8.7e-14 81.3 77 51.9
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 8.7e-14 81.3 137 39.4
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 1.5e-13 80.5 115 45.2
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 3.3e-13 79.3 103 46.6
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 9.6e-13 77.8 117 39.3
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 1.6e-12 77.0 145 40.0
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 4.8e-12 75.5 114 36.8
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 8.1e-12 74.7 115 39.1
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 1.4e-11 73.9 184 34.2
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.8e-11 73.6 83 45.8
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.8e-09 65.9 59 57.6
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.4e-08 63.9 59 55.9
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 5.5e-08 62.0 60 55.0
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 3.5e-07 59.3 49 61.2
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 6.0e-07 58.5 84 39.3
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 6.0e-07 58.5 84 39.3
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 3.0e-06 56.2 58 48.3


User provided reference genes

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