Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 0.0e+00 1281.9 632 100.0
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 9.1e-119 431.8 688 39.8
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 6.1e-107 392.5 661 40.5
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 1.4e-103 381.3 702 37.7
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 2.7e-102 377.1 689 38.0
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 3.5e-102 376.7 711 36.7
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 2.9e-101 373.6 668 38.3
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 2.5e-100 370.5 674 36.8
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 4.4e-97 359.8 611 39.0
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 1.3e-93 348.2 661 37.1
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 8.6e-93 345.5 680 35.1
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 1.1e-92 345.1 691 36.9
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 1.9e-92 344.4 648 37.2
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 1.9e-92 344.4 672 35.4
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 4.3e-92 343.2 676 35.5
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 9.5e-92 342.0 669 35.1
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 1.8e-90 337.8 663 36.2
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 1.5e-89 334.7 661 35.6
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 2.0e-89 334.3 656 35.2
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 2.6e-89 334.0 674 35.5
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 3.4e-89 333.6 663 35.7
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 4.4e-89 333.2 670 34.3
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 4.4e-89 333.2 691 34.4
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 4.4e-89 333.2 670 36.4
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 5.8e-89 332.8 670 34.3
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 1.7e-88 331.3 683 35.7
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 3.7e-88 330.1 659 35.7
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 1.4e-87 328.2 685 35.5
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 4.1e-87 326.6 670 36.0
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 5.4e-87 326.2 665 35.6
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 1.2e-86 325.1 654 36.2
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 2.0e-86 324.3 674 35.0
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 6.0e-86 322.8 662 34.6
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 5.0e-85 319.7 668 34.1
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 6.6e-85 319.3 658 34.2
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.5e-84 318.2 660 34.2
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 1.9e-84 317.8 659 35.8
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 3.3e-84 317.0 690 33.6
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 4.3e-84 316.6 694 34.7
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 4.3e-84 316.6 647 35.4
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 1.2e-83 315.1 726 33.6
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 6.2e-83 312.8 683 34.0
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 3.1e-82 310.5 663 33.9
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 3.4e-81 307.0 721 33.7
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 4.4e-81 306.6 668 34.1
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 5.8e-81 306.2 668 34.7
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 9.8e-81 305.4 494 40.3
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 6.4e-80 302.8 492 37.8
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 9.2e-79 298.9 672 33.5
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 2.1e-78 297.7 573 35.6
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 1.0e-77 295.4 551 36.1
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.7e-77 294.7 508 38.2
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 2.3e-77 294.3 632 35.0
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.9e-76 291.2 638 34.3
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 1.2e-75 288.5 638 33.9
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 1.2e-75 288.5 646 33.3
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 3.6e-75 287.0 559 35.8
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 3.6e-75 287.0 674 32.9
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 7.5e-73 279.3 663 32.0
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 1.3e-72 278.5 692 32.5
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 8.3e-72 275.8 637 33.6
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 9.2e-71 272.3 630 31.9
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.6e-70 271.6 524 35.3
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 2.7e-70 270.8 626 33.4
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 3.5e-70 270.4 659 31.9
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.0e-69 268.9 558 33.7
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 3.9e-69 266.9 639 31.5
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 5.1e-69 266.5 630 33.8
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.1e-68 265.4 511 37.0
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 7.3e-68 262.7 657 33.0
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 8.1e-67 259.2 541 33.6
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 1.1e-66 258.8 541 33.6
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 3.1e-66 257.3 399 40.6
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 3.1e-66 257.3 472 36.4
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 3.4e-65 253.8 541 32.9
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 1.1e-63 248.8 529 32.5
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.3e-61 241.9 639 31.9
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 2.3e-61 241.1 637 31.7
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 1.1e-60 238.8 354 42.4
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.3e-60 237.3 465 34.4
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 3.1e-58 230.7 352 40.9
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 1.5e-57 228.4 747 28.8
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 3.2e-55 220.7 357 41.7
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 4.6e-54 216.9 499 34.3
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 2.3e-53 214.5 399 35.3
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 3.3e-52 210.7 406 34.7
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 2.6e-49 201.1 332 40.7
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 7.1e-47 193.0 353 38.0
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.4e-42 177.9 370 34.1
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 8.4e-40 169.5 314 36.9
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.4e-39 168.7 316 37.0
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 7.1e-39 166.4 326 35.9
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 2.7e-38 164.5 312 36.2
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 9.6e-36 156.0 224 40.6
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 5.3e-34 150.2 203 45.8
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 1.5e-33 148.7 160 48.1
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 2.5e-31 141.4 371 31.3
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 9.3e-31 139.4 238 37.8
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 4.6e-30 137.1 292 33.6
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 1.3e-29 135.6 363 30.3
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 1.6e-27 128.6 263 34.2
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 8.2e-27 126.3 265 36.6
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 1.5e-25 122.1 229 36.7
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.5e-25 122.1 442 26.2
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.5e-25 122.1 291 31.3
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 3.6e-22 110.9 142 46.5
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 9.7e-20 102.8 311 29.3
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.3e-18 97.1 222 31.5
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 7.9e-14 83.2 148 37.2
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 1.5e-12 79.0 302 27.2
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.3e-12 77.8 136 37.5
Thecc.08G119000 Theobroma cacao HOM05D004492 ORTHO05D005602 1.4e-10 72.4 277 26.7
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.4e-10 71.6 137 38.0
Mapoly0101s0047 Marchantia polymorpha HOM05D004492 ORTHO05D005602 1.2e-09 69.3 310 25.8
Thecc.08G119400 Theobroma cacao HOM05D004492 ORTHO05D005602 4.5e-09 67.4 281 24.6
Thecc.08G119200 Theobroma cacao HOM05D004492 ORTHO05D005602 7.7e-09 66.6 278 25.5
Thecc.08G119300 Theobroma cacao HOM05D004492 ORTHO05D005602 3.8e-08 64.3 278 25.5
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 5.0e-08 63.9 48 56.2
PRCOL_00006858 Prasinoderma coloniale HOM05D004492 ORTHO05D005602 6.5e-08 63.5 124 29.8
Aqoxy5G02431 Aquilegia oxysepala HOM05D004492 ORTHO05D005602 1.4e-07 62.4 296 24.3
Thecc.08G118900 Theobroma cacao HOM05D004492 ORTHO05D005602 1.9e-07 62.0 278 24.1
CBR_g16883 Chara braunii HOM05D004492 ORTHO05D001303 2.5e-07 61.6 271 21.8
MCO09G489 Micromonas commoda HOM05D006715 ORTHO05D008345 3.2e-07 61.2 335 24.8
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 3.2e-07 61.2 294 24.1
RcHm_v2.0_Chr6g0294881 Rosa chinensis HOM05D004492 ORTHO05D005602 3.2e-07 61.2 264 25.0
Dinv27371 Davidia involucrata HOM05D004492 ORTHO05D005602 5.5e-07 60.5 294 23.5
TAR625G1407 Trochodendron aralioides HOM05D004492 ORTHO05D005602 5.5e-07 60.5 294 23.1
ATR0684G004 Amborella trichopoda HOM05D004492 ORTHO05D005602 7.2e-07 60.1 282 23.0
AUR62004708 Chenopodium quinoa HOM05D004492 ORTHO05D005602 7.2e-07 60.1 275 24.7
Rhsim01G0183300 Rhododendron simsii HOM05D006673 ORTHO05D008458 1.6e-06 58.9 276 24.6
Mapoly0082s0074 Marchantia polymorpha HOM05D004492 ORTHO05D030137 2.1e-06 58.5 149 25.5
AUR62030552 Chenopodium quinoa HOM05D004492 ORTHO05D005602 2.7e-06 58.2 295 24.4
Eucgr.G00611 Eucalyptus grandis HOM05D004492 ORTHO05D005602 3.6e-06 57.8 274 22.3


User provided reference genes

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