Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0076 Ceratophyllum demersum HOM05D005054 ORTHO05D005948 2.6e-110 402.1 209 100.0
CDE01G0036 Ceratophyllum demersum HOM05D005054 ORTHO05D005948 6.5e-90 334.3 209 85.6
Thecc.09G021500 Theobroma cacao HOM05D005054 ORTHO05D005948 3.2e-68 262.3 192 71.9
TAR626G0177 Trochodendron aralioides HOM05D005054 ORTHO05D005948 1.2e-67 260.4 208 66.8
Dinv18198 Davidia involucrata HOM05D005054 ORTHO05D005948 7.8e-67 257.7 204 69.1
MD08G1157200 Malus domestica HOM05D005054 ORTHO05D005948 1.7e-66 256.5 193 70.5
Cpa.g.sc187.3 Carica papaya HOM05D005054 ORTHO05D005948 2.3e-66 256.1 197 70.1
ClCG05G016710 Citrullus lanatus HOM05D005054 ORTHO05D005948 2.3e-66 256.1 191 70.2
Duzib187G0432 Durio zibethinus HOM05D005054 ORTHO05D005948 2.3e-66 256.1 196 70.4
Nn2g12158 Nelumbo nucifera HOM05D005054 ORTHO05D005948 3.9e-66 255.4 204 65.7
Gohir.D07G033500 Gossypium hirsutum HOM05D005054 ORTHO05D005948 6.6e-66 254.6 192 70.3
Gohir.A07G029500 Gossypium hirsutum HOM05D005054 ORTHO05D005948 1.1e-65 253.8 192 70.3
COL.COLO4_18886 Corchorus olitorius HOM05D002641 ORTHO05D001537 3.3e-65 252.3 179 72.6
Gohir.D06G101400 Gossypium hirsutum HOM05D005054 ORTHO05D005948 3.3e-65 252.3 189 69.8
MD15G1128300 Malus domestica HOM05D005054 ORTHO05D005948 3.3e-65 252.3 193 69.4
Gorai.001G035100 Gossypium raimondii HOM05D005054 ORTHO05D005948 4.3e-65 251.9 192 69.8
Aqoxy7G03608 Aquilegia oxysepala HOM05D005054 ORTHO05D005948 9.5e-65 250.8 197 67.0
Gorai.010G116300 Gossypium raimondii HOM05D005054 ORTHO05D005948 1.2e-64 250.4 189 69.3
HPP92_000468 Vanilla planifolia HOM05D005054 ORTHO05D005948 1.2e-64 250.4 204 63.7
arahy.Tifrunner.gnm1.ann1.NJ6IKW Arachis hypogaea HOM05D005054 ORTHO05D005948 1.6e-64 250.0 194 68.0
CiPaw.08G009700 Carya illinoinensis HOM05D005054 ORTHO05D005948 3.6e-64 248.8 197 69.0
GSVIVG01035953001 Vitis vinifera HOM05D005054 ORTHO05D005948 4.7e-64 248.4 192 68.8
Eucgr.C02743 Eucalyptus grandis HOM05D005054 ORTHO05D005948 6.2e-64 248.1 189 69.8
Gohir.A06G099200 Gossypium hirsutum HOM05D005054 ORTHO05D005948 1.1e-63 247.3 191 69.1
TAR625G0984 Trochodendron aralioides HOM05D005054 ORTHO05D005948 1.1e-63 247.3 209 65.6
CANSAT78G0154 Cannabis sativa HOM05D005054 ORTHO05D005948 1.4e-63 246.9 204 62.7
Lalb_Chr08g0244231 Lupinus albus HOM05D005054 ORTHO05D005948 1.4e-63 246.9 197 68.0
CsaV3_3G046210 Cucumis sativus L. HOM05D005054 ORTHO05D005948 1.8e-63 246.5 200 65.5
Prupe.1G483600 Prunus persica HOM05D005054 ORTHO05D005948 1.8e-63 246.5 193 68.9
MELO3C003718.2 Cucumis melo HOM05D005054 ORTHO05D005948 3.1e-63 245.7 200 65.0
Lalb_Chr23g0268431 Lupinus albus HOM05D005054 ORTHO05D005948 4.0e-63 245.4 196 67.9
PGR083G2649 Punica granatum HOM05D005054 ORTHO05D005948 5.2e-63 245.0 171 72.5
TPR.G3145 Trifolium pratense HOM05D005054 ORTHO05D005948 5.2e-63 245.0 205 63.9
TWI32G1290 Tripterygium wilfordii HOM05D005054 ORTHO05D005948 5.2e-63 245.0 196 67.9
ATR0767G140 Amborella trichopoda HOM05D005054 ORTHO05D005948 6.8e-63 244.6 200 65.5
HanXRQChr13g0403241 Helianthus annuus HOM05D005054 ORTHO05D005948 1.2e-62 243.8 184 69.0
Phvul.009G091300 Phaseolus vulgaris HOM05D005054 ORTHO05D005948 1.2e-62 243.8 197 66.0
Potri.006G257100 Populus trichocarpa HOM05D005054 ORTHO05D005948 1.2e-62 243.8 197 66.0
Sed0027504 Sechium edule HOM05D005054 ORTHO05D005948 2.6e-62 242.7 200 65.0
VMungo1309G0253 Vigna mungo HOM05D005054 ORTHO05D005948 2.6e-62 242.7 200 66.0
Manes.16G124300 Manihot esculenta HOM05D005054 ORTHO05D005948 3.4e-62 242.3 193 67.9
Ciclev10009464m.g Citrus clementina HOM05D005054 ORTHO05D005948 4.4e-62 241.9 197 67.5
Ca_15755_v3 Cicer arietinum L. HOM05D005054 ORTHO05D005948 5.8e-62 241.5 197 66.5
BcaB08g35175 Brassica carinata HOM05D005054 ORTHO05D005948 7.5e-62 241.1 198 67.2
Lj8A723T59 Lonicera japonica HOM05D005054 ORTHO05D005948 7.5e-62 241.1 153 80.4
Sed0004415 Sechium edule HOM05D005054 ORTHO05D005948 7.5e-62 241.1 210 62.4
Psat5g031480 Pisum sativum HOM05D005054 ORTHO05D005948 9.8e-62 240.7 171 71.3
Sc06g0000550 Simmondsia chinensis HOM05D005054 ORTHO05D005948 1.7e-61 240.0 208 64.4
Actinidia14591 Actinidia chinensis HOM05D005054 ORTHO05D005948 2.2e-61 239.6 190 66.8
Medtr3g106570 Medicago truncatula HOM05D005054 ORTHO05D005948 2.2e-61 239.6 196 65.3
AT2G25310 Arabidopsis thaliana HOM05D005054 ORTHO05D005948 2.9e-61 239.2 200 66.5
AT4G32130 Arabidopsis thaliana HOM05D005054 ORTHO05D005948 2.9e-61 239.2 195 65.6
BcaC07g40871 Brassica carinata HOM05D005054 ORTHO05D005948 2.9e-61 239.2 201 66.2
Glyma.04G065200 Glycine max HOM05D005054 ORTHO05D005948 2.9e-61 239.2 200 64.5
Glyma.06G066400 Glycine max HOM05D005054 ORTHO05D005948 2.9e-61 239.2 197 64.5
THA.LOC104803846 Tarenaya hassleriana HOM05D005054 ORTHO05D005948 2.9e-61 239.2 205 63.4
Haze_21489 Corylus avellana HOM05D005054 ORTHO05D005948 3.7e-61 238.8 201 65.7
Thhalv10026275m.g Eutrema salsugineum HOM05D005054 ORTHO05D005948 4.9e-61 238.4 195 64.1
AL4G16690 Arabidopsis lyrata HOM05D005054 ORTHO05D005948 6.4e-61 238.0 204 64.7
Potri.018G024600 Populus trichocarpa HOM05D005054 ORTHO05D005948 6.4e-61 238.0 197 65.5
BraA09t40971Z Brassica rapa HOM05D005054 ORTHO05D005948 8.3e-61 237.7 201 65.7
THA.LOC104803647 Tarenaya hassleriana HOM05D005054 ORTHO05D005948 8.3e-61 237.7 192 68.2
BcaNung03140 Brassica carinata HOM05D005054 ORTHO05D005948 1.1e-60 237.3 198 63.6
Carub.0004s0494 Capsella rubella HOM05D005054 ORTHO05D005948 1.1e-60 237.3 200 65.0
HanXRQChr02g0050341 Helianthus annuus HOM05D005054 ORTHO05D005948 1.1e-60 237.3 196 66.3
Solyc08g041980.3 Solanum lycopersicum HOM05D005054 ORTHO05D005948 1.1e-60 237.3 193 66.8
Sp4g04450 Schrenkiella parvula HOM05D005054 ORTHO05D005948 1.4e-60 236.9 196 66.8
BcaC09g52000 Brassica carinata HOM05D005054 ORTHO05D005948 1.9e-60 236.5 195 65.1
A09p55700 Brassica napus HOM05D005054 ORTHO05D005948 1.9e-60 236.5 201 65.2
CARHR116210 Cardamine hirsuta HOM05D005054 ORTHO05D005948 1.9e-60 236.5 196 65.8
CiPaw.07G225400 Carya illinoinensis HOM05D005054 ORTHO05D005948 1.9e-60 236.5 201 65.7
Thhalv10000323m.g Eutrema salsugineum HOM05D005054 ORTHO05D005948 1.9e-60 236.5 198 65.7
Lj1g0015588 Lotus japonicus HOM05D005054 ORTHO05D005948 1.9e-60 236.5 201 64.7
ECA233G2586 Erigeron canadensis HOM05D005054 ORTHO05D005948 2.4e-60 236.1 191 66.5
Lsat_1_v5_gn_6_20280 Lactuca sativa HOM05D005054 ORTHO05D005948 3.2e-60 235.7 190 66.8
AL7G19730 Arabidopsis lyrata HOM05D005054 ORTHO05D005948 4.1e-60 235.3 191 66.5
PSO017G3131 Papaver somniferum HOM05D005054 ORTHO05D005948 4.1e-60 235.3 193 65.3
Sp7g29920 Schrenkiella parvula HOM05D005054 ORTHO05D005948 7.0e-60 234.6 195 64.6
BraA01t00585Z Brassica rapa HOM05D005054 ORTHO05D005948 9.2e-60 234.2 173 68.8
Carub.0007s0843 Capsella rubella HOM05D005054 ORTHO05D005948 9.2e-60 234.2 199 64.8
CSS0023723 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 1.6e-59 233.4 195 65.6
CSS0024153 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 1.6e-59 233.4 195 65.6
Sopen08g012360 Solanum pennellii HOM05D005054 ORTHO05D005948 1.6e-59 233.4 202 64.9
BolC8t51440H Brassica oleracea HOM05D005054 ORTHO05D005948 2.7e-59 232.6 207 64.3
Hund25870 Selenicereus undatus HOM05D005054 ORTHO05D005948 3.5e-59 232.3 199 64.8
C08p38700 Brassica napus HOM05D005054 ORTHO05D005948 6.0e-59 231.5 207 63.8
CAN.G9.14 Capsicum annuum HOM05D005054 ORTHO05D005948 6.0e-59 231.5 202 61.9
Cc08_g00410 Coffea canephora HOM05D005054 ORTHO05D005948 7.8e-59 231.1 195 63.6
PSO170G1976 Papaver somniferum HOM05D005054 ORTHO05D005948 7.8e-59 231.1 200 63.0
Actinidia33783 Actinidia chinensis HOM05D005054 ORTHO05D005948 1.0e-58 230.7 156 73.7
BolC1t00678H Brassica oleracea HOM05D005054 ORTHO05D005948 3.9e-58 228.8 196 63.8
CARHR240040 Cardamine hirsuta HOM05D005054 ORTHO05D005948 3.9e-58 228.8 173 68.8
Manes.03G012900 Manihot esculenta HOM05D005054 ORTHO05D005948 5.1e-58 228.4 196 63.3
CSS0023128 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 6.6e-58 228.0 193 65.3
CSS0037696 Camellia sinensis var. sinensis HOM05D005054 ORTHO05D005948 6.6e-58 228.0 193 65.3
Migut.A00022 Erythranthe guttata HOM05D005054 ORTHO05D005948 2.8e-56 222.6 201 60.7
MSTRG.26017 Avicennia marina HOM05D005054 ORTHO05D005948 3.6e-56 222.2 187 63.6
QL02p021123 Quercus lobata HOM05D005054 ORTHO05D005948 3.6e-56 222.2 197 62.4
Zm00001eb275230 Zea mays HOM05D005054 ORTHO05D005948 6.2e-56 221.5 198 62.6
Actinidia22328 Actinidia chinensis HOM05D005054 ORTHO05D005948 8.1e-56 221.1 176 66.5
FAN27G2872 Fragaria x ananassa HOM05D005054 ORTHO05D005948 1.8e-55 219.9 189 65.6
RcHm_v2.0_Chr6g0297531 Rosa chinensis HOM05D005054 ORTHO05D005948 1.8e-55 219.9 196 62.8
FAN20G0036 Fragaria x ananassa HOM05D005054 ORTHO05D005948 2.3e-55 219.5 189 65.1
Nitab4.5_0003389g0010 Nicotiana tabacum HOM05D005054 ORTHO05D005948 3.1e-55 219.2 212 59.0
Os06g0644100 Oryza sativa ssp. japonica HOM05D005054 ORTHO05D005948 3.1e-55 219.2 201 58.2
FAN24G3113 Fragaria x ananassa HOM05D005054 ORTHO05D005948 8.9e-55 217.6 189 64.6
unitig_0.g694 Utricularia gibba HOM05D005054 ORTHO05D005948 8.9e-55 217.6 192 62.0
Rhsim02G0203400 Rhododendron simsii HOM05D005054 ORTHO05D005948 1.5e-54 216.9 200 60.0
FAN15G2263 Fragaria x ananassa HOM05D002641 ORTHO05D005948 2.0e-54 216.5 189 64.0
FvH4_2g28770 Fragaria vesca HOM05D005054 ORTHO05D005948 3.4e-54 215.7 196 61.7
EL10Ac2g04185 Beta vulgaris HOM05D005054 ORTHO05D005948 4.4e-54 215.3 188 62.8
Sabra18G0027000 Salix brachista HOM05D002641 ORTHO05D001537 9.9e-54 214.2 211 57.3
MBI14_g36925_MAGBIO Magnolia biondii HOM05D005054 ORTHO05D005948 1.7e-53 213.4 137 80.3
Sopen06g024410 Solanum pennellii HOM05D005054 ORTHO05D005948 1.1e-52 210.7 188 63.8
CAN.G1475.8 Capsicum annuum HOM05D005054 ORTHO05D005948 1.9e-52 209.9 191 62.3
Nitab4.5_0000109g0420 Nicotiana tabacum HOM05D005054 ORTHO05D005948 2.4e-52 209.5 162 67.9
AUR62031549 Chenopodium quinoa HOM05D005054 ORTHO05D005948 3.2e-52 209.1 155 71.6
vmacro11190 Vaccinium macrocarpon HOM05D005054 ORTHO05D005948 4.1e-52 208.8 281 47.3
SalBow4G2693 Salvia bowleyana HOM05D005054 ORTHO05D005948 7.1e-52 208.0 204 59.8
Solyc06g065930.4 Solanum lycopersicum HOM05D005054 ORTHO05D005948 4.6e-51 205.3 188 62.2
CDE01G0528 Ceratophyllum demersum HOM05D005054 ORTHO05D005948 1.7e-50 203.4 172 65.7
Zm00001eb387020 Zea mays HOM05D005054 ORTHO05D005948 4.3e-49 198.7 173 64.2
PGSC0003DMG400029900 Solanum tuberosum HOM05D005054 ORTHO05D005948 1.6e-48 196.8 121 80.2
Nitab4.5_0005785g0040 Nicotiana tabacum HOM05D005054 ORTHO05D005948 2.4e-47 193.0 121 78.5
Mapoly0003s0100 Marchantia polymorpha HOM05D005054 ORTHO05D005948 5.2e-47 191.8 197 55.3
arahy.Tifrunner.gnm1.ann1.49IL45 Arachis hypogaea HOM05D005054 ORTHO05D005948 2.9e-45 186.0 196 54.6
AUR62012426 Chenopodium quinoa HOM05D005054 ORTHO05D005948 6.4e-45 184.9 188 58.0
Atru.chr7.2466 Acer truncatum HOM05D002641 ORTHO05D001537 3.5e-43 179.1 165 61.2
AagrBONN_evm.TU.Sc2ySwM_362.161 Anthoceros agrestis HOM05D005054 ORTHO05D005948 3.5e-43 179.1 145 64.8
SMO354G0008 Selaginella moellendorffii HOM05D005054 ORTHO05D005948 2.3e-42 176.4 147 61.2
SGA_v2.0_scaffold64G21960 Striga asiatica HOM05D005054 ORTHO05D005948 6.6e-42 174.9 115 75.7
Pp3c25_10780 Physcomitrium patens HOM05D005054 ORTHO05D005948 2.8e-40 169.5 179 50.8
Oeu024982.1 Olea europaea HOM05D005054 ORTHO05D005948 1.8e-39 166.8 135 68.1
DCAR_001545 Daucus carota HOM05D005054 ORTHO05D005948 7.6e-38 161.4 104 76.0
Zm00001eb149990 Zea mays HOM05D005054 ORTHO05D005948 1.7e-37 160.2 123 68.3
Peaxi162Scf00136g00153 Petunia axillaris HOM05D005054 ORTHO05D005948 3.8e-37 159.1 100 80.0
Nitab4.5_0000857g0140 Nicotiana tabacum HOM05D005054 ORTHO05D005948 6.4e-37 158.3 148 60.1
SMO364G0469 Selaginella moellendorffii HOM05D005054 ORTHO05D005948 1.9e-33 146.7 146 53.4
HPP92_000478 Vanilla planifolia HOM05D005054 ORTHO05D005948 2.8e-32 142.9 180 46.7
CBR_g24053 Chara braunii HOM05D005054 ORTHO05D005948 1.2e-30 137.5 162 46.9
arahy.Tifrunner.gnm1.ann1.M1LVA5 Arachis hypogaea HOM05D005054 ORTHO05D005948 3.4e-30 136.0 87 75.9
Actinidia14094 Actinidia chinensis HOM05D005054 ORTHO05D005948 6.0e-27 125.2 189 42.9
Zm00001eb279560 Zea mays HOM05D005054 ORTHO05D005948 3.3e-25 119.4 113 60.2
FvH4_6g38550 Fragaria vesca HOM05D005054 ORTHO05D005948 9.0e-15 84.7 97 51.5
A01p06180 Brassica napus HOM05D000316 ORTHO05D001978 5.0e-13 79.0 71 54.9
MCO11G876 Micromonas commoda HOM05D005054 ORTHO05D005948 8.4e-13 78.2 144 35.4
Cre07.g340650 Chlamydomonas reinhardtii HOM05D005054 ORTHO05D005948 4.2e-12 75.9 186 32.3
TPR.G18056 Trifolium pratense HOM05D005054 ORTHO05D005948 9.3e-12 74.7 56 69.6
C01p06810 Brassica napus HOM05D000316 ORTHO05D001978 1.2e-11 74.3 57 59.6
Zm00001eb260640 Zea mays HOM05D002563 ORTHO05D005948 1.6e-11 73.9 66 59.1
Zm00001eb260650 Zea mays HOM05D005054 ORTHO05D005948 1.6e-11 73.9 56 69.6
Zm00001eb412760 Zea mays HOM05D002563 ORTHO05D005948 4.6e-11 72.4 54 66.7
EL10Ac1g01779 Beta vulgaris HOM05D005054 ORTHO05D005948 7.4e-09 65.1 39 84.6


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